Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.7e-27 125.2 60 100.0
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 1.0e-24 115.9 58 91.4
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.1e-24 114.4 59 89.8
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.2e-24 113.6 59 89.8
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.2e-24 113.6 59 89.8
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.8e-24 113.2 57 93.0
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.8e-24 113.2 59 91.5
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 94.7
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 94.7
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 8.9e-24 112.8 57 93.0
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 1.2e-23 112.5 59 89.8
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.2e-23 112.5 57 91.2
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 1.5e-23 112.1 57 91.2
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 2.6e-23 111.3 59 88.1
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 2.6e-23 111.3 57 91.2
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.6e-23 111.3 57 91.2
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 3.4e-23 110.9 57 91.2
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 3.4e-23 110.9 56 92.9
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 4.4e-23 110.5 57 89.5
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 5.8e-23 110.2 56 92.9
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 5.8e-23 110.2 57 87.7
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 7.5e-23 109.8 57 87.7
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 7.5e-23 109.8 59 86.4
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 7.5e-23 109.8 59 86.4
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 7.5e-23 109.8 59 86.4
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 7.5e-23 109.8 57 91.2
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 7.5e-23 109.8 56 91.1
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 7.5e-23 109.8 57 89.5
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 7.5e-23 109.8 57 87.7
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 7.5e-23 109.8 57 87.7
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 7.5e-23 109.8 57 87.7
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 9.8e-23 109.4 57 86.0
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 9.8e-23 109.4 55 92.7
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 9.8e-23 109.4 57 91.2
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 9.8e-23 109.4 57 87.7
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 1.3e-22 109.0 57 87.7
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 1.3e-22 109.0 55 92.7
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 1.3e-22 109.0 55 92.7
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 1.3e-22 109.0 57 87.7
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 1.3e-22 109.0 55 92.7
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.3e-22 109.0 55 92.7
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 1.3e-22 109.0 55 92.7
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.7e-22 108.6 57 89.5
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 1.7e-22 108.6 55 90.9
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.7e-22 108.6 59 84.7
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 2.2e-22 108.2 58 86.2
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 2.2e-22 108.2 55 92.7
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 2.2e-22 108.2 55 90.9
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 2.9e-22 107.8 57 87.7
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 3.7e-22 107.5 59 89.8
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 3.7e-22 107.5 57 89.5
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 3.7e-22 107.5 59 83.1
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 3.7e-22 107.5 54 92.6
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 4.9e-22 107.1 55 90.9
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 4.9e-22 107.1 55 90.9
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 4.9e-22 107.1 55 90.9
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 4.9e-22 107.1 57 86.0
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 6.4e-22 106.7 57 89.5
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 6.4e-22 106.7 58 84.5
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 6.4e-22 106.7 59 83.1
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 6.4e-22 106.7 54 92.6
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 8.3e-22 106.3 55 89.1
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 8.3e-22 106.3 59 83.1
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 8.3e-22 106.3 57 86.0
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 1.1e-21 105.9 56 87.5
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.4e-21 105.5 54 90.7
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.4e-21 105.5 54 90.7
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.4e-21 105.5 54 90.7
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.4e-21 105.5 54 90.7
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.4e-21 105.5 54 90.7
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.4e-21 105.5 55 89.1
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.4e-21 105.5 54 90.7
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 1.9e-21 105.1 57 84.2
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 1.9e-21 105.1 58 86.2
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.9e-21 105.1 56 87.5
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 2.4e-21 104.8 57 84.2
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 2.4e-21 104.8 57 82.5
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 2.4e-21 104.8 57 86.0
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 3.2e-21 104.4 57 86.0
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 3.2e-21 104.4 56 87.5
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 4.1e-21 104.0 57 84.2
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 4.1e-21 104.0 57 84.2
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 4.1e-21 104.0 58 81.0
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 4.1e-21 104.0 57 84.2
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 5.4e-21 103.6 57 82.5
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 7.0e-21 103.2 55 87.3
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 7.0e-21 103.2 54 88.9
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 9.2e-21 102.8 57 82.5
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 1.2e-20 102.4 57 82.5
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 2.0e-20 101.7 57 82.5
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 2.0e-20 101.7 57 82.5
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 2.0e-20 101.7 57 82.5
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 2.0e-20 101.7 57 82.5
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 2.0e-20 101.7 57 80.7
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 2.0e-20 101.7 56 78.6
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 2.7e-20 101.3 57 80.7
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 1.3e-19 99.0 54 83.3
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 5.0e-19 97.1 53 83.0
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 8.6e-19 96.3 52 84.6
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.5e-18 95.5 51 86.3
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 7.3e-18 93.2 55 74.5
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.2e-17 92.4 49 85.7
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 2.8e-17 91.3 49 79.6
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 3.4e-15 84.3 49 77.6
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 2.9e-14 81.3 47 76.6
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 6.4e-14 80.1 48 70.8
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 5.4e-13 77.0 48 64.6
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 2.1e-12 75.1 41 85.4
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.3e-11 72.4 41 82.9
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 1.8e-08 62.0 46 56.5
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.8e-08 62.0 49 55.1
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 1.2e-07 59.3 48 50.0
Glyma.07G142100 Glycine max HOM05D005750 ORTHO05D007126 8.4e-06 53.1 41 65.9


User provided reference genes

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