Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 1.8e-129 466.1 255 100.0
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 7.5e-56 221.5 211 53.1
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.7e-55 220.3 211 52.6
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 4.9e-55 218.8 211 52.6
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 2.4e-54 216.5 222 53.2
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 5.4e-54 215.3 227 49.8
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 1.7e-52 210.3 212 52.8
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 6.6e-52 208.4 212 50.5
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 8.6e-52 208.0 215 49.8
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.5e-51 207.2 219 49.8
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 3.3e-51 206.1 235 47.7
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 5.6e-51 205.3 213 51.2
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 7.3e-51 204.9 212 52.4
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 7.3e-51 204.9 211 50.2
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 9.5e-51 204.5 218 51.4
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 2.8e-50 203.0 217 49.3
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 2.8e-50 203.0 231 48.1
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 1.4e-49 200.7 213 50.7
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 1.4e-49 200.7 226 49.1
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.5e-48 197.2 212 50.5
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.5e-48 197.2 226 46.9
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 1.5e-48 197.2 221 45.2
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 2.6e-48 196.4 220 48.6
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 2.6e-48 196.4 221 45.7
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 3.4e-48 196.1 217 48.4
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 3.4e-48 196.1 253 45.8
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 5.8e-48 195.3 214 49.1
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 5.8e-48 195.3 258 42.6
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 5.8e-48 195.3 224 49.1
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 7.6e-48 194.9 224 47.3
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 9.9e-48 194.5 227 46.7
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 2.9e-47 193.0 213 48.8
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 3.7e-47 192.6 216 48.6
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 4.9e-47 192.2 198 49.0
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 6.4e-47 191.8 219 46.6
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 6.4e-47 191.8 210 48.6
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 6.4e-47 191.8 210 48.6
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 6.4e-47 191.8 215 48.4
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 6.4e-47 191.8 215 47.4
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 1.1e-46 191.0 226 44.2
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.4e-46 190.7 215 47.0
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 1.9e-46 190.3 217 47.5
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 1.9e-46 190.3 208 47.6
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 3.2e-46 189.5 215 48.4
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 3.2e-46 189.5 238 45.8
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 7.1e-46 188.3 209 46.9
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 7.1e-46 188.3 210 48.1
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 9.2e-46 188.0 216 46.8
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 2.1e-45 186.8 218 45.4
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 2.7e-45 186.4 216 44.4
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 2.7e-45 186.4 216 46.3
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 3.5e-45 186.0 227 48.0
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 4.6e-45 185.7 219 44.7
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 7.8e-45 184.9 259 41.7
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 7.8e-45 184.9 256 42.6
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 1.0e-44 184.5 217 44.2
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 1.0e-44 184.5 217 44.2
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 1.3e-44 184.1 232 44.4
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 1.7e-44 183.7 219 44.7
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 1.7e-44 183.7 204 47.5
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 1.7e-44 183.7 210 47.1
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 2.3e-44 183.3 220 45.5
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 3.9e-44 182.6 218 45.0
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 5.1e-44 182.2 206 47.1
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 5.1e-44 182.2 210 45.7
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 6.6e-44 181.8 219 43.8
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 8.6e-44 181.4 227 45.8
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 1.1e-43 181.0 240 42.5
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 1.9e-43 180.3 218 45.9
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 5.6e-43 178.7 235 43.8
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 5.6e-43 178.7 262 39.3
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.2e-42 177.6 220 42.3
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 2.8e-42 176.4 210 44.8
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 3.6e-42 176.0 236 41.9
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 3.6e-42 176.0 229 43.2
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 1.8e-41 173.7 221 43.0
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.4e-41 173.3 207 43.0
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 5.2e-41 172.2 227 44.1
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 5.8e-40 168.7 214 44.4
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 2.9e-39 166.4 201 43.8
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 2.9e-39 166.4 210 44.3
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.4e-38 164.1 253 39.5
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 4.2e-38 162.5 204 39.7
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 7.1e-38 161.8 208 40.4
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 1.2e-37 161.0 225 44.4
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 2.1e-37 160.2 192 49.5
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 2.3e-36 156.8 170 48.8
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 8.7e-36 154.8 183 44.8
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 8.7e-36 154.8 246 40.7
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 2.8e-34 149.8 130 54.6
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 3.6e-34 149.4 205 37.1
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 4.4e-32 142.5 348 29.9
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 7.6e-32 141.7 166 48.8
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 3.2e-30 136.3 221 37.6
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 9.3e-30 134.8 143 49.7
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 3.5e-29 132.9 128 51.6
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 2.3e-28 130.2 217 38.2
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 3.3e-27 126.3 131 48.1
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 3.6e-26 122.9 133 48.9
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 5.3e-25 119.0 127 48.0
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 3.5e-21 106.3 151 42.4
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.5e-19 100.9 151 42.4
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 9.6e-19 98.2 202 30.2
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 2.1e-10 70.5 51 54.9
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 6.3e-10 68.9 85 40.0
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 3.1e-09 66.6 99 36.4
MCO02G117 Micromonas commoda HOM05D007345 ORTHO05D009277 9.3e-06 55.1 52 44.2


User provided reference genes

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