Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 4.2e-278 960.7 472 100.0
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.4e-124 450.7 480 49.8
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 3.1e-124 449.5 480 49.0
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 9.2e-124 448.0 475 50.5
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 1.2e-123 447.6 479 49.3
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 4.3e-121 439.1 500 48.0
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 3.6e-120 436.0 483 47.4
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 2.9e-117 426.4 479 48.0
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 7.0e-116 421.8 456 49.1
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 6.0e-115 418.7 475 47.2
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.0e-115 418.7 475 47.2
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 3.0e-114 416.4 476 46.2
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 8.6e-114 414.8 467 46.3
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.9e-113 413.7 472 47.7
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 3.3e-113 412.9 470 47.7
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 3.3e-113 412.9 487 46.0
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 1.2e-112 411.0 482 48.3
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 3.6e-112 409.5 462 48.3
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 8.0e-112 408.3 479 45.1
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 1.4e-111 407.5 480 45.2
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 4.0e-111 406.0 474 44.5
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 2.6e-110 403.3 473 46.3
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 3.4e-110 402.9 486 45.1
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 9.8e-110 401.4 461 45.8
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 9.8e-110 401.4 454 48.2
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 9.8e-110 401.4 462 45.5
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 1.7e-109 400.6 458 46.1
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 2.9e-109 399.8 473 46.1
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 3.7e-109 399.4 474 46.6
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 2.4e-108 396.7 478 46.2
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 4.1e-108 396.0 446 47.3
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.6e-107 394.0 489 44.2
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 1.6e-107 394.0 445 45.2
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 3.5e-107 392.9 479 44.1
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 3.5e-107 392.9 491 44.4
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 3.9e-106 389.4 486 44.2
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 6.6e-106 388.7 509 41.8
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 5.6e-105 385.6 452 44.9
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 6.2e-104 382.1 479 44.7
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 8.1e-104 381.7 455 44.8
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 4.0e-103 379.4 489 43.8
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 1.5e-102 377.5 444 45.9
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 1.5e-102 377.5 468 45.9
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 2.0e-102 377.1 477 43.6
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 2.6e-102 376.7 462 44.4
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 4.4e-102 375.9 386 49.5
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 9.9e-102 374.8 480 44.2
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 1.9e-100 370.5 391 49.6
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 2.4e-100 370.2 514 40.3
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 7.8e-99 365.2 337 54.3
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 1.3e-98 364.4 467 45.0
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.1e-97 361.3 461 43.2
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.1e-97 361.3 478 42.1
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 5.6e-97 359.0 454 43.6
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 2.6e-94 350.1 382 47.9
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 4.4e-94 349.4 455 40.9
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 7.6e-94 348.6 524 38.7
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 9.9e-94 348.2 469 40.5
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 3.8e-93 346.3 451 43.9
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 8.4e-93 345.1 388 47.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 5.4e-92 342.4 470 42.8
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 7.1e-92 342.0 378 48.9
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 1.6e-91 340.9 460 40.0
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.0e-90 338.2 473 40.8
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 1.3e-90 337.8 477 38.2
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 1.7e-90 337.4 470 43.0
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 5.1e-90 335.9 480 39.0
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 8.7e-90 335.1 512 39.8
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 8.7e-90 335.1 459 39.0
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.9e-89 334.0 489 40.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 5.6e-89 332.4 483 38.5
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 5.6e-89 332.4 479 38.4
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 7.3e-89 332.0 480 37.9
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 1.6e-88 330.9 487 38.2
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 1.6e-88 330.9 563 36.9
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 3.6e-88 329.7 489 37.4
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 8.1e-88 328.6 328 50.6
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 4.0e-87 326.2 461 39.3
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 5.3e-87 325.9 458 40.8
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 2.0e-86 323.9 468 42.3
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 2.0e-86 323.9 474 37.8
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 3.8e-85 319.7 465 39.4
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 8.4e-85 318.5 436 41.7
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.6e-83 314.3 532 36.5
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 1.6e-83 314.3 453 40.6
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 6.0e-83 312.4 527 35.9
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 5.6e-81 305.8 311 51.8
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.3e-80 304.7 462 39.2
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.6e-80 304.3 485 36.7
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 4.0e-79 299.7 470 37.2
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.8e-71 274.2 268 51.1
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 8.4e-69 265.4 459 32.7
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 9.3e-60 235.3 277 48.0
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 1.6e-59 234.6 284 44.4
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 1.1e-57 228.4 324 39.5
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 5.7e-57 226.1 475 32.4
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 1.3e-56 224.9 292 41.4
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.2e-56 224.2 287 41.8
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 1.7e-53 214.5 158 63.3
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 5.5e-52 209.5 201 51.7
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 5.9e-46 189.5 284 39.1
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 2.7e-43 180.6 186 47.8
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-39 168.3 345 33.6
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 1.5e-38 164.9 208 45.2
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 5.9e-38 162.9 176 49.4
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.1e-33 148.7 192 43.8
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 1.6e-30 138.3 204 40.7
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 7.2e-28 129.4 194 40.2
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 3.8e-21 107.1 131 45.0
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 4.0e-18 97.1 153 38.6
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.5e-17 95.1 361 26.6
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 1.3e-16 92.0 82 56.1
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 1.2e-14 85.5 133 37.6
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 1.3e-13 82.0 156 37.2
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 5.0e-13 80.1 289 24.9
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 5.0e-13 80.1 84 50.0
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 2.8e-11 74.3 53 60.4
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 9.8e-09 65.9 96 38.5
SEGI_11371 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 3.2e-07 60.8 53 50.9
SEGI_20259 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 4.5e-06 57.0 75 44.0


User provided reference genes

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