Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0605G207 Amborella trichopoda HOM05D003349 ORTHO05D003898 8.3e-230 800.0 411 100.0
SEGI_09484 Sequoiadendron giganteum HOM05D003349 ORTHO05D003898 2.7e-39 167.2 236 40.7
SEGI_29772 Sequoiadendron giganteum HOM05D003349 ORTHO05D003898 2.7e-39 167.2 236 40.7
SEGI_06046 Sequoiadendron giganteum HOM05D003349 ORTHO05D003898 3.3e-37 160.2 269 34.6
SEGI_12350 Sequoiadendron giganteum HOM05D003349 ORTHO05D003898 2.6e-34 150.6 229 37.6
CDE06G0484 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 1.0e-33 148.7 227 38.8
CDE07G0844 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 1.7e-33 147.9 227 37.9
MSTRG.19938 Avicennia marina HOM05D003349 ORTHO05D003898 1.6e-31 141.4 225 38.7
PSO339G2750 Papaver somniferum HOM05D003349 ORTHO05D003898 1.4e-30 138.3 230 35.7
PSO384G0567 Papaver somniferum HOM05D003349 ORTHO05D003898 1.4e-30 138.3 230 35.7
Duzib128G1865 Durio zibethinus HOM05D003349 ORTHO05D003898 1.8e-30 137.9 260 35.4
HPP92_004178 Vanilla planifolia HOM05D003349 ORTHO05D003898 1.8e-30 137.9 228 35.5
Lj1A1137T83 Lonicera japonica HOM05D003349 ORTHO05D003898 3.0e-30 137.1 206 40.3
Aqoxy1G00500 Aquilegia oxysepala HOM05D003349 ORTHO05D003898 8.8e-30 135.6 249 35.3
SGA_v2.0_scaffold24G10518 Striga asiatica HOM05D003349 ORTHO05D003898 8.8e-30 135.6 225 37.3
Duzib177G0419 Durio zibethinus HOM05D003349 ORTHO05D003898 1.5e-29 134.8 206 39.3
TAR633G2041 Trochodendron aralioides HOM05D003349 ORTHO05D003898 2.0e-29 134.4 206 38.8
MELO3C008798.2 Cucumis melo HOM05D003349 ORTHO05D003898 3.3e-29 133.7 251 33.9
TAR369G0075 Trochodendron aralioides HOM05D003349 ORTHO05D003898 3.3e-29 133.7 205 37.1
Actinidia22087 Actinidia chinensis HOM05D003349 ORTHO05D003898 4.3e-29 133.3 244 35.7
ClCG04G005280 Citrullus lanatus HOM05D003349 ORTHO05D003898 4.3e-29 133.3 251 33.9
CsaV3_4G013310 Cucumis sativus L. HOM05D003349 ORTHO05D003898 4.3e-29 133.3 251 33.9
Nn2g15886 Nelumbo nucifera HOM05D003349 ORTHO05D003898 5.7e-29 132.9 203 37.4
Nn7g35824 Nelumbo nucifera HOM05D003349 ORTHO05D003898 9.7e-29 132.1 203 37.4
TAR623G1645 Trochodendron aralioides HOM05D003349 ORTHO05D003898 9.7e-29 132.1 203 37.9
ECA238G0201 Erigeron canadensis HOM05D003349 ORTHO05D003898 1.3e-28 131.7 205 39.5
Oeu060005.1 Olea europaea HOM05D003349 ORTHO05D003898 1.3e-28 131.7 224 36.2
Actinidia30557 Actinidia chinensis HOM05D003349 ORTHO05D003898 1.7e-28 131.3 205 39.0
ATR0697G133 Amborella trichopoda HOM05D003349 ORTHO05D003898 1.7e-28 131.3 262 31.3
Os11g0580000 Oryza sativa ssp. japonica HOM05D003349 ORTHO05D003898 1.7e-28 131.3 246 33.3
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 2.2e-28 131.0 231 38.5
Gohir.A11G259100 Gossypium hirsutum HOM05D003349 ORTHO05D003898 2.2e-28 131.0 206 38.8
SalBow6G1268 Salvia bowleyana HOM05D003349 ORTHO05D003898 2.2e-28 131.0 229 34.5
EL10Ac3g06814 Beta vulgaris HOM05D003349 ORTHO05D003898 2.8e-28 130.6 226 34.1
COL.COLO4_13609 Corchorus olitorius HOM05D003349 ORTHO05D003898 2.8e-28 130.6 206 38.8
Migut.J01894 Erythranthe guttata HOM05D003349 ORTHO05D003898 2.8e-28 130.6 225 36.0
Ciclev10019371m.g Citrus clementina HOM05D003349 ORTHO05D003898 3.7e-28 130.2 206 39.3
Thecc.05G293700 Theobroma cacao HOM05D003349 ORTHO05D003898 3.7e-28 130.2 206 38.3
CSS0039180 Camellia sinensis var. sinensis HOM05D003349 ORTHO05D003898 4.8e-28 129.8 206 38.3
Sed0005648 Sechium edule HOM05D003349 ORTHO05D003898 4.8e-28 129.8 205 37.1
unitig_899.g15643 Utricularia gibba HOM05D003349 ORTHO05D003898 4.8e-28 129.8 228 35.1
vmacro12571 Vaccinium macrocarpon HOM05D003349 ORTHO05D003898 4.8e-28 129.8 235 34.5
Gohir.D11G269200 Gossypium hirsutum HOM05D003349 ORTHO05D003898 6.3e-28 129.4 206 38.8
Gorai.007G289100 Gossypium raimondii HOM05D003349 ORTHO05D003898 6.3e-28 129.4 206 38.8
Atru.chr2.1365 Acer truncatum HOM05D003349 ORTHO05D003898 8.2e-28 129.0 206 38.8
Glyma.02G071700 Glycine max HOM05D003349 ORTHO05D003898 8.2e-28 129.0 253 33.6
HanXRQChr16g0523881 Helianthus annuus HOM05D003349 ORTHO05D003898 1.1e-27 128.6 202 39.6
Mapoly0001s0286 Marchantia polymorpha HOM05D003349 ORTHO05D003898 1.1e-27 128.6 236 35.2
Sopen03g015010 Solanum pennellii HOM05D003349 ORTHO05D003898 1.4e-27 128.3 205 38.0
Psat1g096120 Pisum sativum HOM05D003349 ORTHO05D003898 1.8e-27 127.9 231 35.1
TWI34G0012 Tripterygium wilfordii HOM05D003349 ORTHO05D003898 1.8e-27 127.9 205 36.6
TAR636G3347 Trochodendron aralioides HOM05D003349 ORTHO05D003898 1.8e-27 127.9 205 36.6
CAN.G317.13 Capsicum annuum HOM05D003349 ORTHO05D003898 3.1e-27 127.1 235 34.9
DCAR_019880 Daucus carota HOM05D003349 ORTHO05D003898 3.1e-27 127.1 255 32.5
HanXRQChr09g0266371 Helianthus annuus HOM05D003349 ORTHO05D003898 3.1e-27 127.1 205 38.0
Hma1.2p1_0376F.1_g139170 Hydrangea macrophylla HOM05D003349 ORTHO05D003898 3.1e-27 127.1 205 38.0
Zm00001eb200470 Zea mays HOM05D003349 ORTHO05D003898 3.1e-27 127.1 211 37.4
MD14G1002300 Malus domestica HOM05D003349 ORTHO05D003898 5.3e-27 126.3 227 35.2
Rhsim03G0001200 Rhododendron simsii HOM05D003349 ORTHO05D003898 5.3e-27 126.3 235 34.9
Glyma.16G152900 Glycine max HOM05D003349 ORTHO05D003898 6.9e-27 125.9 253 34.0
Nitab4.5_0002825g0010 Nicotiana tabacum HOM05D003349 ORTHO05D003898 6.9e-27 125.9 205 37.6
Sed0027207 Sechium edule HOM05D003349 ORTHO05D003898 6.9e-27 125.9 205 36.6
Sc13g0002710 Simmondsia chinensis HOM05D003349 ORTHO05D003898 6.9e-27 125.9 198 36.4
Dinv37011 Davidia involucrata HOM05D003349 ORTHO05D003898 9.1e-27 125.6 205 37.6
Prupe.7G003500 Prunus persica HOM05D003349 ORTHO05D003898 9.1e-27 125.6 227 35.2
Solyc03g062700.4 Solanum lycopersicum HOM05D003349 ORTHO05D003898 9.1e-27 125.6 205 37.1
PGR042G2987 Punica granatum HOM05D003349 ORTHO05D003898 1.2e-26 125.2 205 36.6
QL07p020065 Quercus lobata HOM05D003349 ORTHO05D003898 1.2e-26 125.2 257 33.9
RcHm_v2.0_Chr3g0497191 Rosa chinensis HOM05D003349 ORTHO05D003898 1.2e-26 125.2 203 36.5
AUR62032685 Chenopodium quinoa HOM05D003349 ORTHO05D003898 1.5e-26 124.8 229 32.8
Lj2A357T88 Lonicera japonica HOM05D003349 ORTHO05D003898 1.5e-26 124.8 204 36.8
FvH4_1g28060 Fragaria vesca HOM05D003349 ORTHO05D003898 2.0e-26 124.4 225 35.6
FAN19G0867 Fragaria x ananassa HOM05D003349 ORTHO05D003898 2.0e-26 124.4 225 35.6
Lsat_1_v5_gn_2_57641 Lactuca sativa HOM05D003349 ORTHO05D003898 2.0e-26 124.4 205 37.1
Hund19241 Selenicereus undatus HOM05D003349 ORTHO05D003898 2.0e-26 124.4 226 34.1
PGSC0003DMG400008643 Solanum tuberosum HOM05D003349 ORTHO05D003898 2.0e-26 124.4 205 37.1
FAN23G0882 Fragaria x ananassa HOM05D003349 ORTHO05D003898 2.6e-26 124.0 225 35.6
Phvul.004G079400 Phaseolus vulgaris HOM05D003349 ORTHO05D003898 2.6e-26 124.0 231 34.6
Ca_25618_v3 Cicer arietinum L. HOM05D003349 ORTHO05D003898 3.4e-26 123.6 231 34.6
FAN18G3983 Fragaria x ananassa HOM05D003349 ORTHO05D003898 3.4e-26 123.6 225 35.6
FvH4_5g28880 Fragaria vesca HOM05D003349 ORTHO05D003898 4.5e-26 123.2 225 35.6
Lalb_Chr06g0173961 Lupinus albus HOM05D003349 ORTHO05D003898 4.5e-26 123.2 248 34.7
Cc06_g22870 Coffea canephora HOM05D003349 ORTHO05D003898 5.9e-26 122.9 195 37.4
FAN26G3194 Fragaria x ananassa HOM05D003349 ORTHO05D003898 5.9e-26 122.9 225 35.1
TWI60G1263 Tripterygium wilfordii HOM05D003349 ORTHO05D003898 5.9e-26 122.9 205 35.1
CiPaw.09G001500 Carya illinoinensis HOM05D003349 ORTHO05D003898 7.7e-26 122.5 231 36.8
Nitab4.5_0000001g0070 Nicotiana tabacum HOM05D003349 ORTHO05D003898 7.7e-26 122.5 205 36.1
Lalb_Chr21g0317171 Lupinus albus HOM05D003349 ORTHO05D003898 1.0e-25 122.1 229 35.4
Sabra13G0052200 Salix brachista HOM05D003349 ORTHO05D003898 1.0e-25 122.1 228 36.8
AUR62032062 Chenopodium quinoa HOM05D003349 ORTHO05D003898 1.3e-25 121.7 229 32.3
CiPaw.06G089600 Carya illinoinensis HOM05D003349 ORTHO05D003898 1.7e-25 121.3 230 36.1
ECA285G0003 Erigeron canadensis HOM05D003349 ORTHO05D003898 1.7e-25 121.3 204 38.2
Oeu012406.1 Olea europaea HOM05D003349 ORTHO05D003898 1.7e-25 121.3 226 34.5
Pp3c5_7300 Physcomitrium patens HOM05D003349 ORTHO05D003898 1.7e-25 121.3 224 33.5
Os12g0624800 Oryza sativa ssp. japonica HOM05D003349 ORTHO05D003898 2.2e-25 120.9 325 28.0
SMO364G0157 Selaginella moellendorffii HOM05D003349 ORTHO05D003898 2.2e-25 120.9 221 32.6
SGA_v2.0_scaffold118G32450 Striga asiatica HOM05D003349 ORTHO05D003898 2.2e-25 120.9 227 35.7
Zm00001eb032360 Zea mays HOM05D003349 ORTHO05D003898 2.2e-25 120.9 249 33.3
Ca_21768_v3 Cicer arietinum L. HOM05D003349 ORTHO05D003898 2.9e-25 120.6 208 35.6
DCAR_009680 Daucus carota HOM05D003349 ORTHO05D003898 2.9e-25 120.6 245 34.7
Potri.013G058700 Populus trichocarpa HOM05D003349 ORTHO05D003898 2.9e-25 120.6 227 35.7
Medtr6g032885 Medicago truncatula HOM05D003349 ORTHO05D003898 3.8e-25 120.2 231 34.2
Potri.019G033900 Populus trichocarpa HOM05D003349 ORTHO05D003898 3.8e-25 120.2 223 35.9
Sabra19G0041800 Salix brachista HOM05D003349 ORTHO05D003898 3.8e-25 120.2 228 35.5
Manes.08G150100 Manihot esculenta HOM05D003349 ORTHO05D003898 5.0e-25 119.8 227 36.1
THA.LOC104821510 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 5.0e-25 119.8 205 36.6
CANSAT56G0778 Cannabis sativa HOM05D003349 ORTHO05D003898 6.5e-25 119.4 237 31.6
Cpa.g.sc51.107 Carica papaya HOM05D003349 ORTHO05D003898 6.5e-25 119.4 227 34.8
Lj2g0007320 Lotus japonicus HOM05D003349 ORTHO05D003898 6.5e-25 119.4 200 38.0
Sp6g02300 Schrenkiella parvula HOM05D003349 ORTHO05D003898 6.5e-25 119.4 205 36.1
CANSAT78G1787 Cannabis sativa HOM05D003349 ORTHO05D003898 8.5e-25 119.0 206 35.9
Peaxi162Scf00076g01031 Petunia axillaris HOM05D003349 ORTHO05D003898 8.5e-25 119.0 205 35.6
arahy.Tifrunner.gnm1.ann1.GFD0T8 Arachis hypogaea HOM05D003349 ORTHO05D003898 1.1e-24 118.6 251 33.5
arahy.Tifrunner.gnm1.ann1.N26BUN Arachis hypogaea HOM05D003349 ORTHO05D003898 1.1e-24 118.6 251 33.5
VMungo1383G1871 Vigna mungo HOM05D003349 ORTHO05D003898 1.1e-24 118.6 229 31.9
Lsat_1_v5_gn_1_59620 Lactuca sativa HOM05D003349 ORTHO05D003898 1.4e-24 118.2 204 37.7
HanXRQChr01g0024711 Helianthus annuus HOM05D003349 ORTHO05D003898 1.9e-24 117.9 206 36.9
A09p01870 Brassica napus HOM05D003349 ORTHO05D003898 2.5e-24 117.5 229 35.4
BraA09t35838Z Brassica rapa HOM05D003349 ORTHO05D003898 2.5e-24 117.5 229 35.8
BcaNung04050 Brassica carinata HOM05D003349 ORTHO05D003898 5.5e-24 116.3 229 34.9
C09p01910 Brassica napus HOM05D003349 ORTHO05D003898 5.5e-24 116.3 229 34.9
BolC9t53126H Brassica oleracea HOM05D003349 ORTHO05D003898 5.5e-24 116.3 229 34.9
Sc19g0006470 Simmondsia chinensis HOM05D003349 ORTHO05D003898 5.5e-24 116.3 255 31.4
TPR.G34626 Trifolium pratense HOM05D003349 ORTHO05D003898 5.5e-24 116.3 231 32.5
BcaB01g02049 Brassica carinata HOM05D003349 ORTHO05D003898 7.2e-24 115.9 229 35.4
Glyma.19G110600 Glycine max HOM05D003349 ORTHO05D003898 7.2e-24 115.9 229 31.9
Lalb_Chr02g0157061 Lupinus albus HOM05D003349 ORTHO05D003898 7.2e-24 115.9 227 34.8
Manes.09G142100 Manihot esculenta HOM05D003349 ORTHO05D003898 7.2e-24 115.9 227 35.7
Eucgr.A02093 Eucalyptus grandis HOM05D003349 ORTHO05D003898 9.4e-24 115.5 183 37.7
Lj1g0027644 Lotus japonicus HOM05D003349 ORTHO05D003898 9.4e-24 115.5 225 32.4
Phvul.001G110000 Phaseolus vulgaris HOM05D003349 ORTHO05D003898 9.4e-24 115.5 229 31.9
GSVIVG01033391001 Vitis vinifera HOM05D003349 ORTHO05D003898 1.2e-23 115.2 182 37.9
Carub.0002s0958 Capsella rubella HOM05D003349 ORTHO05D003898 1.6e-23 114.8 205 34.6
AT1G54385 Arabidopsis thaliana HOM05D003349 ORTHO05D003898 2.1e-23 114.4 206 35.4
arahy.Tifrunner.gnm1.ann1.CJ7Z8Q Arachis hypogaea HOM05D003349 ORTHO05D003898 4.7e-23 113.2 208 34.1
arahy.Tifrunner.gnm1.ann1.L5U228 Arachis hypogaea HOM05D003349 ORTHO05D003898 4.7e-23 113.2 208 34.1
Thhalv10028548m.g Eutrema salsugineum HOM05D003349 ORTHO05D003898 7.9e-23 112.5 206 35.4
Thhalv10022309m.g Eutrema salsugineum HOM05D003349 ORTHO05D003898 1.0e-22 112.1 233 32.2
Glyma.16G041800 Glycine max HOM05D003349 ORTHO05D003898 1.0e-22 112.1 229 30.6
PGR142G2675 Punica granatum HOM05D003349 ORTHO05D003898 3.0e-22 110.5 206 35.4
Aa31LG5G14550 Aethionema arabicum HOM05D003349 ORTHO05D003898 3.9e-22 110.2 236 31.4
C05p63090 Brassica napus HOM05D003349 ORTHO05D003898 3.9e-22 110.2 205 34.6
AT3G03970 Arabidopsis thaliana HOM05D003349 ORTHO05D003898 6.7e-22 109.4 238 32.8
A01p41230 Brassica napus HOM05D003349 ORTHO05D003898 6.7e-22 109.4 205 33.7
BNapus_Darmor_BZH_scaffold_78p00480 Brassica napus HOM05D003349 ORTHO05D003898 6.7e-22 109.4 205 33.7
CARHR055490 Cardamine hirsuta HOM05D003349 ORTHO05D003898 6.7e-22 109.4 206 34.5
BraA05t23079Z Brassica rapa HOM05D003349 ORTHO05D003898 1.1e-21 108.6 205 34.1
BcaC05g30298 Brassica carinata HOM05D003349 ORTHO05D003898 1.5e-21 108.2 205 34.1
FAN13G1757 Fragaria x ananassa HOM05D003349 ORTHO05D003898 1.5e-21 108.2 222 33.3
THA.LOC104802863 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 1.5e-21 108.2 203 34.0
AL3G13880 Arabidopsis lyrata HOM05D003349 ORTHO05D003898 2.0e-21 107.8 290 30.7
A05p43390 Brassica napus HOM05D003349 ORTHO05D003898 2.0e-21 107.8 205 34.1
THA.LOC104820732 Tarenaya hassleriana HOM05D003349 ORTHO05D003898 2.0e-21 107.8 211 34.1
BcaC05g29887 Brassica carinata HOM05D003349 ORTHO05D003898 3.3e-21 107.1 205 34.1
BolC5t34961H Brassica oleracea HOM05D003349 ORTHO05D003898 5.7e-21 106.3 205 33.2
Carub.0003s0322 Capsella rubella HOM05D003349 ORTHO05D003898 3.7e-20 103.6 237 31.2
AagrBONN_evm.TU.Sc2ySwM_362.243 Anthoceros agrestis HOM05D003349 ORTHO05D003898 6.3e-20 102.8 230 27.4
Pp3c3_27710 Physcomitrium patens HOM05D003349 ORTHO05D003898 8.2e-20 102.4 226 29.6
Pp3c22_2440 Physcomitrium patens HOM05D003349 ORTHO05D003898 1.1e-19 102.1 241 30.7
Sp3g02940 Schrenkiella parvula HOM05D003349 ORTHO05D003898 1.1e-19 102.1 205 33.7
HanXRQChr03g0090421 Helianthus annuus HOM05D003349 ORTHO05D003898 1.8e-19 101.3 238 29.0
Aqoxy2G00587 Aquilegia oxysepala HOM05D003349 ORTHO05D003898 5.3e-19 99.8 227 29.1
CARHR078110 Cardamine hirsuta HOM05D003349 ORTHO05D003898 5.3e-19 99.8 205 33.2
Pp3c18_19210 Physcomitrium patens HOM05D003349 ORTHO05D003898 5.3e-19 99.8 192 31.8
BraA01t04546Z Brassica rapa HOM05D003349 ORTHO05D003898 7.0e-19 99.4 203 33.5
BolC1t05788H Brassica oleracea HOM05D003349 ORTHO05D003898 9.1e-19 99.0 202 31.7
Eucgr.K01495 Eucalyptus grandis HOM05D003349 ORTHO05D003898 7.7e-18 95.9 202 31.7
SHI21767 Sapria himalayana HOM05D003349 ORTHO05D003898 1.0e-17 95.5 260 30.4
AL1G64640 Arabidopsis lyrata HOM05D003349 ORTHO05D003898 1.7e-17 94.7 206 32.0
BolC1t05779H Brassica oleracea HOM05D003349 ORTHO05D003898 6.5e-17 92.8 203 32.0
SMO116G0096 Selaginella moellendorffii HOM05D003118 ORTHO05D003898 6.5e-17 92.8 206 31.1
Pp3c19_3520 Physcomitrium patens HOM05D003349 ORTHO05D003898 8.5e-17 92.4 331 24.5
Pp3c19_3524 Physcomitrium patens HOM05D003349 ORTHO05D003898 8.5e-17 92.4 331 24.5
BcaC09g47770 Brassica carinata HOM05D003349 ORTHO05D003898 3.2e-16 90.5 185 31.9
BcaC05g30237 Brassica carinata HOM05D003349 ORTHO05D003898 1.8e-14 84.7 200 31.0
BraA09t41584Z Brassica rapa HOM05D003349 ORTHO05D003898 4.0e-14 83.6 147 35.4
Pp3c6_17270 Physcomitrium patens HOM05D003349 ORTHO05D003898 7.0e-11 72.8 204 24.5
AagrBONN_evm.TU.Sc2ySwM_117.2517 Anthoceros agrestis HOM05D003349 ORTHO05D003898 1.2e-10 72.0 115 35.7
CDE07G1683 Ceratophyllum demersum HOM05D003349 ORTHO05D003898 1.8e-06 58.2 108 29.6
MD12G1002900 Malus domestica HOM05D003349 ORTHO05D003898 2.3e-06 57.8 132 31.1
BcaC05g29361 Brassica carinata HOM05D003349 ORTHO05D003898 5.2e-06 56.6 98 35.7


User provided reference genes

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