Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 2.0e-71 272.3 135 100.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.6e-44 183.0 125 66.4
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 3.9e-43 178.3 130 64.6
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 3.9e-43 178.3 127 67.7
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.5e-42 176.4 122 65.6
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.5e-42 176.4 122 68.0
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.9e-42 176.0 138 61.6
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 7.3e-42 174.1 120 65.8
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 9.5e-42 173.7 130 62.3
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 4.7e-41 171.4 132 59.8
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 4.7e-41 171.4 132 59.1
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 8.1e-41 170.6 118 69.5
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 1.4e-40 169.9 123 64.2
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.8e-40 169.5 123 64.2
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 2.3e-40 169.1 127 60.6
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 3.1e-40 168.7 126 64.3
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 4.0e-40 168.3 126 65.1
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 6.8e-40 167.5 132 59.1
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 8.9e-40 167.2 123 61.8
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.5e-39 166.4 132 60.6
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 1.5e-39 166.4 123 62.6
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.5e-39 166.4 126 61.9
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 4.4e-39 164.9 118 66.1
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.4e-39 164.9 124 59.7
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.4e-39 164.9 124 59.7
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 4.4e-39 164.9 129 61.2
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 7.6e-39 164.1 126 61.1
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 7.6e-39 164.1 118 66.1
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 9.9e-39 163.7 122 60.7
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 1.3e-38 163.3 122 60.7
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.3e-38 163.3 122 59.0
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.7e-38 162.9 118 64.4
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.7e-38 162.9 129 60.5
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 2.9e-38 162.2 123 59.3
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 2.9e-38 162.2 123 60.2
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 3.8e-38 161.8 133 58.6
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 4.9e-38 161.4 125 59.2
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 4.9e-38 161.4 126 61.1
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 4.9e-38 161.4 129 57.4
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 6.4e-38 161.0 129 59.7
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 8.4e-38 160.6 122 59.8
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 8.4e-38 160.6 123 59.3
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.1e-37 160.2 129 58.9
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.4e-37 159.8 126 60.3
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.4e-37 159.8 118 63.6
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.4e-37 159.8 122 59.0
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 1.4e-37 159.8 123 60.2
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 1.9e-37 159.5 119 59.7
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 2.4e-37 159.1 129 57.4
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 4.1e-37 158.3 129 57.4
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 4.1e-37 158.3 129 56.6
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 7.1e-37 157.5 129 56.6
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 9.2e-37 157.1 126 58.7
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 9.2e-37 157.1 122 58.2
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 2.1e-36 156.0 122 58.2
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 2.7e-36 155.6 123 59.3
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 2.7e-36 155.6 123 57.7
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 3.5e-36 155.2 123 59.3
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.5e-36 155.2 120 60.8
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 4.6e-36 154.8 122 57.4
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 4.6e-36 154.8 122 56.6
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 4.6e-36 154.8 122 59.8
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 6.0e-36 154.5 122 57.4
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 1.0e-35 153.7 122 58.2
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 3.0e-35 152.1 119 59.7
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 3.9e-35 151.8 128 53.9
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 3.9e-35 151.8 122 56.6
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 3.9e-35 151.8 122 56.6
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 3.9e-35 151.8 122 56.6
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 3.9e-35 151.8 122 59.0
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 3.9e-35 151.8 122 58.2
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 8.6e-35 150.6 126 56.3
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 8.6e-35 150.6 134 52.2
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 8.6e-35 150.6 122 55.7
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.1e-34 150.2 125 56.8
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 1.1e-34 150.2 125 59.2
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.5e-34 149.8 121 59.5
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 1.5e-34 149.8 122 55.7
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 1.9e-34 149.4 123 56.1
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 3.3e-34 148.7 128 53.1
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 4.3e-34 148.3 122 56.6
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 9.6e-34 147.1 125 56.0
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 9.6e-34 147.1 119 58.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.2e-33 146.7 103 66.0
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.2e-33 146.7 104 63.5
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.2e-33 146.7 104 63.5
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 4.7e-33 144.8 118 55.1
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 8.1e-33 144.1 96 69.8
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 8.1e-33 144.1 172 47.7
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 2.0e-31 139.4 123 50.4
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 2.6e-31 139.0 158 48.1
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.7e-30 136.3 119 52.9
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 3.2e-29 132.1 97 67.0
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 9.3e-29 130.6 166 42.2
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.2e-28 130.2 96 63.5
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 7.8e-28 127.5 121 50.4
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 2.3e-27 125.9 119 51.3
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 3.0e-27 125.6 103 54.4
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 3.9e-27 125.2 97 61.9
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 3.9e-27 125.2 96 61.5
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 3.3e-26 122.1 103 58.3
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 4.3e-26 121.7 128 48.4
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 7.3e-26 120.9 103 57.3
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 6.2e-25 117.9 100 57.0
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.4e-24 116.7 99 57.6
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.5e-23 113.2 96 57.3
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 2.6e-23 112.5 96 53.1
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 7.6e-23 110.9 96 56.2
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 2.9e-22 109.0 96 51.0
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.8e-22 108.6 96 51.0
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 5.4e-21 104.8 69 72.5
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 2.7e-20 102.4 104 48.1
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 6.0e-20 101.3 93 54.8
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.5e-18 96.7 127 43.3
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 4.3e-18 95.1 100 44.0
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 7.4e-18 94.4 74 62.2
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.8e-17 92.4 97 51.5
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 1.2e-15 87.0 90 51.1
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 9.6e-10 67.4 110 28.2
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 2.8e-09 65.9 78 47.4
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.5e-07 60.1 54 50.0


User provided reference genes

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