Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 7.9e-55 216.9 109 100.0
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.5e-40 169.5 94 91.5
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 5.2e-30 134.4 90 73.3
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 2.8e-28 128.6 90 71.1
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 2.8e-28 128.6 90 71.1
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.8e-28 127.9 90 71.1
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 8.3e-28 127.1 90 72.2
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 1.1e-27 126.7 90 71.1
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 1.1e-27 126.7 90 71.1
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.1e-27 126.7 90 70.0
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.1e-27 126.7 90 70.0
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.4e-27 126.3 90 71.1
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 1.8e-27 125.9 89 71.9
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 1.8e-27 125.9 90 70.0
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 1.8e-27 125.9 90 71.1
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 1.8e-27 125.9 90 68.9
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 2.4e-27 125.6 90 71.1
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 2.4e-27 125.6 90 68.9
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 3.1e-27 125.2 90 71.1
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 3.1e-27 125.2 90 68.9
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 4.1e-27 124.8 90 68.9
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 5.4e-27 124.4 90 68.9
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 5.4e-27 124.4 90 68.9
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 7.0e-27 124.0 95 67.4
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 7.0e-27 124.0 95 67.4
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 7.0e-27 124.0 90 66.7
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 7.0e-27 124.0 94 69.1
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 7.0e-27 124.0 90 73.3
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 7.0e-27 124.0 90 72.2
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 9.1e-27 123.6 94 67.0
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 1.2e-26 123.2 95 65.3
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 1.2e-26 123.2 90 70.0
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 1.2e-26 123.2 90 68.9
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 1.2e-26 123.2 90 68.9
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.2e-26 123.2 90 68.9
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 1.2e-26 123.2 85 71.8
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 1.6e-26 122.9 90 68.9
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 2.0e-26 122.5 90 66.7
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 2.0e-26 122.5 86 69.8
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 2.0e-26 122.5 93 64.5
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 2.7e-26 122.1 90 67.8
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.7e-26 122.1 90 68.9
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 2.7e-26 122.1 90 70.0
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 3.5e-26 121.7 90 70.0
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 3.5e-26 121.7 90 66.7
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 4.5e-26 121.3 90 70.0
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 4.5e-26 121.3 90 70.0
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 4.5e-26 121.3 90 67.8
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 4.5e-26 121.3 93 63.4
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 4.5e-26 121.3 93 63.4
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 4.5e-26 121.3 86 69.8
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 7.7e-26 120.6 90 67.8
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 7.7e-26 120.6 90 67.8
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.0e-25 120.2 90 66.7
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 1.0e-25 120.2 90 68.9
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 1.0e-25 120.2 90 68.9
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 1.0e-25 120.2 90 70.0
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.3e-25 119.8 90 65.6
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.3e-25 119.8 90 65.6
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.3e-25 119.8 90 65.6
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.3e-25 119.8 90 68.9
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 1.7e-25 119.4 90 67.8
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 2.3e-25 119.0 90 70.0
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.3e-25 119.0 92 66.3
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 2.3e-25 119.0 90 65.6
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 2.9e-25 118.6 90 67.8
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 2.9e-25 118.6 102 57.8
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 2.9e-25 118.6 90 66.7
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 3.8e-25 118.2 90 66.7
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 3.8e-25 118.2 94 61.7
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 3.8e-25 118.2 90 65.6
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 6.5e-25 117.5 90 68.9
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 6.5e-25 117.5 93 62.4
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 6.5e-25 117.5 90 65.6
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 6.5e-25 117.5 90 65.6
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 8.6e-25 117.1 86 67.4
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 8.6e-25 117.1 86 67.4
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 8.6e-25 117.1 90 64.4
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 8.6e-25 117.1 90 68.9
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.1e-24 116.7 93 64.5
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.1e-24 116.7 86 67.4
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 1.1e-24 116.7 90 68.9
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.1e-24 116.7 90 65.6
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 1.5e-24 116.3 90 65.6
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 1.5e-24 116.3 86 69.8
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 1.5e-24 116.3 86 68.6
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 1.5e-24 116.3 90 68.9
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 1.5e-24 116.3 93 64.5
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.9e-24 115.9 90 63.3
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 2.5e-24 115.5 90 67.8
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 3.3e-24 115.2 90 66.7
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.3e-24 115.2 90 65.6
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 3.3e-24 115.2 94 66.0
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 4.2e-24 114.8 90 65.6
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 5.5e-24 114.4 90 62.2
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 7.2e-24 114.0 90 65.6
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 9.5e-24 113.6 90 64.4
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 9.5e-24 113.6 90 62.2
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.2e-23 113.2 97 61.9
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.6e-23 112.8 90 64.4
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 1.6e-23 112.8 94 61.7
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 2.8e-23 112.1 94 61.7
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 3.6e-23 111.7 86 64.0
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 2.3e-22 109.0 93 61.3
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 2.3e-22 109.0 91 61.5
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 4.4e-21 104.8 94 60.6
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 2.0e-18 95.9 92 51.1
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 3.5e-18 95.1 63 71.4
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.0e-17 93.6 64 71.9
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.7e-17 92.8 86 54.7
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.5e-16 89.0 67 64.2
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 3.3e-16 88.6 64 65.6
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 7.3e-16 87.4 81 59.3
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 4.7e-15 84.7 64 64.1
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 9.8e-13 77.0 98 44.9
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 6.4e-12 74.3 85 42.4
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 1.1e-11 73.6 57 64.9
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 1.4e-11 73.2 68 51.5
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 5.4e-11 71.2 64 48.4
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 7.8e-10 67.4 101 41.6
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 9.5e-08 60.5 37 73.0


User provided reference genes

Program Settings