Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0584G055 Amborella trichopoda HOM05D001075 ORTHO05D003859 8.0e-193 677.2 409 100.0
ATR0564G189 Amborella trichopoda HOM05D001075 ORTHO05D003859 7.9e-148 527.7 505 70.9
ATR0118G020 Amborella trichopoda HOM05D001075 ORTHO05D003859 4.8e-121 438.7 462 65.6
ATR0829G029 Amborella trichopoda HOM05D001075 ORTHO05D003859 6.4e-73 278.9 243 72.0
MBI02_g37835_MAGBIO Magnolia biondii HOM05D001075 ORTHO05D003859 1.8e-27 127.9 338 33.7
TAR628G0181 Trochodendron aralioides HOM05D001075 ORTHO05D003859 3.3e-21 107.1 173 42.2
TAR381G0933 Trochodendron aralioides HOM05D001075 ORTHO05D003859 2.8e-20 104.0 176 42.6
TAR625G0559 Trochodendron aralioides HOM05D001075 ORTHO05D003859 1.1e-19 102.1 375 31.2
Nn5g28992 Nelumbo nucifera HOM05D001075 ORTHO05D003859 5.3e-19 99.8 459 30.5
Cfa002724 Carpinus fangiana HOM05D001075 ORTHO05D003859 1.5e-18 98.2 172 41.9
Haze_25002 Corylus avellana HOM05D001075 ORTHO05D003859 1.5e-18 98.2 171 40.4
QL06p050576 Quercus lobata HOM05D001075 ORTHO05D003859 1.3e-17 95.1 173 42.2
TAR376G0571 Trochodendron aralioides HOM05D001075 ORTHO05D003859 1.7e-17 94.7 174 44.3
Sc16g0003070 Simmondsia chinensis HOM05D001075 ORTHO05D003859 2.9e-17 94.0 227 37.0
Cpa.g.sc231.10 Carica papaya HOM05D001075 ORTHO05D003859 3.8e-17 93.6 177 41.2
Hund13648 Selenicereus undatus HOM05D001075 ORTHO05D003859 8.5e-17 92.4 176 39.8
Aqoxy6G00535_Aqoxy6G00536 Aquilegia oxysepala HOM05D001075 ORTHO05D003859 1.9e-16 91.3 233 37.3
Manes.13G077700 Manihot esculenta HOM05D001075 ORTHO05D003859 2.5e-16 90.9 228 36.4
Sabra05G0066000 Salix brachista HOM05D001075 ORTHO05D003859 9.4e-16 89.0 162 43.8
Potri.005G080500 Populus trichocarpa HOM05D001075 ORTHO05D003859 1.6e-15 88.2 162 43.2
AUR62003753 Chenopodium quinoa HOM05D001075 ORTHO05D003859 2.1e-15 87.8 178 38.2
Atru.chr4.269 Acer truncatum HOM05D001075 ORTHO05D003859 6.1e-15 86.3 232 36.2
Potri.007G086900 Populus trichocarpa HOM05D001075 ORTHO05D003859 1.0e-14 85.5 232 36.6
GSVIVG01022190001 Vitis vinifera HOM05D001075 ORTHO05D003859 1.0e-14 85.5 163 42.3
COL.COLO4_11045 Corchorus olitorius HOM05D001075 ORTHO05D003859 1.4e-14 85.1 231 35.1
AUR62002042 Chenopodium quinoa HOM05D001075 ORTHO05D003859 2.3e-14 84.3 182 37.4
CDE10G1172 Ceratophyllum demersum HOM05D001075 ORTHO05D003859 3.9e-14 83.6 175 35.4
Ah.02g122880 Amaranthus hybridus HOM05D001075 ORTHO05D003859 5.1e-14 83.2 170 39.4
CANSAT01G1571 Cannabis sativa HOM05D001075 ORTHO05D003859 5.1e-14 83.2 232 36.6
Nn1g05255 Nelumbo nucifera HOM05D001075 ORTHO05D003859 6.7e-14 82.8 167 43.1
Ciclev10025009m.g Citrus clementina HOM05D001075 ORTHO05D003859 8.8e-14 82.4 162 42.6
Dinv21954 Davidia involucrata HOM05D001075 ORTHO05D003859 2.0e-13 81.3 370 30.3
CDE10G0491 Ceratophyllum demersum HOM05D001075 ORTHO05D003859 7.4e-13 79.3 175 36.0
PSO210G5101 Papaver somniferum HOM05D001075 ORTHO05D003859 7.4e-13 79.3 157 42.0
CiPaw.03G137800 Carya illinoinensis HOM05D001075 ORTHO05D003859 9.7e-13 79.0 172 37.8
Lj2C557T2 Lonicera japonica HOM05D001075 ORTHO05D003859 9.7e-13 79.0 160 38.1
FAN23G2259 Fragaria x ananassa HOM05D001075 ORTHO05D003859 2.2e-12 77.8 171 37.4
Thecc.01G108000 Theobroma cacao HOM05D001075 ORTHO05D003859 2.8e-12 77.4 229 34.5
Hund13649 Selenicereus undatus HOM05D001075 ORTHO05D003859 3.7e-12 77.0 177 38.4
EL10Ac6g15062 Beta vulgaris HOM05D001075 ORTHO05D003859 4.8e-12 76.6 175 37.7
MD01G1022700 Malus domestica HOM05D001075 ORTHO05D003859 4.8e-12 76.6 175 38.9
FAN19G1171 Fragaria x ananassa HOM05D001075 ORTHO05D003859 6.3e-12 76.3 171 36.8
FAN26G1591 Fragaria x ananassa HOM05D001075 ORTHO05D003859 6.3e-12 76.3 171 37.4
PGR004G1876 Punica granatum HOM05D001075 ORTHO05D003859 1.4e-11 75.1 228 32.9
Actinidia20419 Actinidia chinensis HOM05D001075 ORTHO05D003859 1.8e-11 74.7 177 40.1
Eucgr.I00375 Eucalyptus grandis HOM05D001075 ORTHO05D003859 2.4e-11 74.3 157 38.2
Prupe.6G178400 Prunus persica HOM05D001075 ORTHO05D003859 2.4e-11 74.3 173 38.2
HanXRQChr14g0445991 Helianthus annuus HOM05D001075 ORTHO05D003859 3.1e-11 73.9 124 41.9
Lj2A557T53 Lonicera japonica HOM05D001075 ORTHO05D003859 3.1e-11 73.9 123 43.9
RcHm_v2.0_Chr2g0115611 Rosa chinensis HOM05D001075 ORTHO05D003859 3.1e-11 73.9 168 37.5
Duzib187G0230 Durio zibethinus HOM05D001075 ORTHO05D003859 4.1e-11 73.6 160 40.0
Duzib147G1252 Durio zibethinus HOM05D001075 ORTHO05D003859 5.3e-11 73.2 123 43.9
Gohir.D03G044500 Gossypium hirsutum HOM05D001075 ORTHO05D003859 5.3e-11 73.2 232 33.6
Manes.13G090100 Manihot esculenta HOM05D001075 ORTHO05D003859 9.1e-11 72.4 464 29.3
FAN28G0934 Fragaria x ananassa HOM05D001075 ORTHO05D003859 1.2e-10 72.0 171 36.3
Gohir.A02G133000 Gossypium hirsutum HOM05D001075 ORTHO05D003859 5.9e-10 69.7 231 32.0
CiPaw.04G094000 Carya illinoinensis HOM05D001075 ORTHO05D003859 7.7e-10 69.3 432 26.6
TWI74G0010 Tripterygium wilfordii HOM05D001075 ORTHO05D003859 1.0e-09 68.9 229 32.3
CSS0032066 Camellia sinensis var. sinensis HOM05D001075 ORTHO05D003859 1.3e-09 68.6 191 35.6
MD15G1329800 Malus domestica HOM05D001075 ORTHO05D003859 1.7e-09 68.2 168 40.5
CiPaw.04G095100 Carya illinoinensis HOM05D001075 ORTHO05D003859 2.2e-09 67.8 169 38.5
Lj4g0008481 Lotus japonicus HOM05D001075 ORTHO05D003859 2.9e-09 67.4 161 36.6
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 3.8e-09 67.0 126 40.5
PSO541G5252 Papaver somniferum HOM05D001075 ORTHO05D003859 6.5e-09 66.2 166 37.3
PSO675G4532 Papaver somniferum HOM05D001075 ORTHO05D003859 6.5e-09 66.2 167 37.7
Dinv16322 Davidia involucrata HOM05D001075 ORTHO05D003859 8.5e-09 65.9 227 33.5
Hma1.2p1_0308F.1_g120050 Hydrangea macrophylla HOM05D001075 ORTHO05D003859 8.5e-09 65.9 179 37.4
FvH4_1g21740 Fragaria vesca HOM05D001075 ORTHO05D003859 1.1e-08 65.5 148 37.8
Sp7g36210 Schrenkiella parvula HOM05D001075 ORTHO05D003859 1.1e-08 65.5 122 41.0
Migut.L00096 Erythranthe guttata HOM05D001075 ORTHO05D003859 1.9e-08 64.7 124 41.1
MSTRG.15735 Avicennia marina HOM05D001075 ORTHO05D003859 2.5e-08 64.3 127 37.8
TWI77G0890 Tripterygium wilfordii HOM05D001075 ORTHO05D003859 2.5e-08 64.3 176 35.2
Aa31LG6G15590 Aethionema arabicum HOM05D001075 ORTHO05D003859 3.2e-08 63.9 129 43.4
BcaB03g12267 Brassica carinata HOM05D001075 ORTHO05D003859 3.2e-08 63.9 127 41.7
A01p00570 Brassica napus HOM05D001075 ORTHO05D003859 3.2e-08 63.9 145 36.6
BraA01t00064Z Brassica rapa HOM05D001075 ORTHO05D003859 3.2e-08 63.9 145 36.6
BcaC01g00310 Brassica carinata HOM05D001075 ORTHO05D003859 4.2e-08 63.5 128 42.2
C01p00700 Brassica napus HOM05D001075 ORTHO05D003859 4.2e-08 63.5 143 37.1
C03p78120 Brassica napus HOM05D001075 ORTHO05D003859 4.2e-08 63.5 128 42.2
Dinv44736 Davidia involucrata HOM05D001075 ORTHO05D003859 5.5e-08 63.2 126 36.5
AL7G11880 Arabidopsis lyrata HOM05D001075 ORTHO05D003859 7.2e-08 62.8 131 40.5
BcaNung05548 Brassica carinata HOM05D001075 ORTHO05D003859 7.2e-08 62.8 131 41.2
BraA08t34299Z Brassica rapa HOM05D001075 ORTHO05D003859 9.4e-08 62.4 126 41.3
Thhalv10024660m.g Eutrema salsugineum HOM05D001075 ORTHO05D003859 9.4e-08 62.4 122 39.3
Lj6g0021202 Lotus japonicus HOM05D001075 ORTHO05D003859 9.4e-08 62.4 228 30.3
BolC3t20075H Brassica oleracea HOM05D001075 ORTHO05D003859 1.2e-07 62.0 128 42.2
CARHR247040 Cardamine hirsuta HOM05D001075 ORTHO05D003859 1.2e-07 62.0 130 40.0
PSO675G1873 Papaver somniferum HOM05D001075 ORTHO05D003859 1.2e-07 62.0 166 36.7
Sabra07G0071900 Salix brachista HOM05D001075 ORTHO05D003859 1.2e-07 62.0 148 38.5
GSVIVG01008977001 Vitis vinifera HOM05D001075 ORTHO05D003859 2.1e-07 61.2 125 36.0
A08p23450 Brassica napus HOM05D001075 ORTHO05D003859 3.6e-07 60.5 126 41.3
THA.LOC104824862 Tarenaya hassleriana HOM05D001075 ORTHO05D003859 3.6e-07 60.5 125 36.0
VMungo1383G2292 Vigna mungo HOM05D001075 ORTHO05D003859 3.6e-07 60.5 229 32.3
Glyma.11G237500 Glycine max HOM05D001075 ORTHO05D003859 4.7e-07 60.1 141 35.5
TPR.G21050 Trifolium pratense HOM05D001075 ORTHO05D003859 4.7e-07 60.1 231 29.4
Zm00001eb018610 Zea mays HOM05D001075 ORTHO05D003859 4.7e-07 60.1 172 32.6
Zm00001eb327960 Zea mays HOM05D001075 ORTHO05D003859 6.1e-07 59.7 128 35.9
Carub.0007s0156 Capsella rubella HOM05D001075 ORTHO05D003859 1.0e-06 58.9 131 39.7
ClCG07G009410 Citrullus lanatus HOM05D001075 ORTHO05D003859 1.0e-06 58.9 123 39.8
Glyma.18G019700 Glycine max HOM05D001075 ORTHO05D003859 1.0e-06 58.9 139 33.8
Sed0027467 Sechium edule HOM05D001075 ORTHO05D003859 1.0e-06 58.9 123 41.5
HPP92_019110 Vanilla planifolia HOM05D001075 ORTHO05D003859 1.4e-06 58.5 144 41.7
Zm00001eb392330 Zea mays HOM05D001075 ORTHO05D003859 1.4e-06 58.5 226 29.2
AT4G39680 Arabidopsis thaliana HOM05D001075 ORTHO05D003859 1.8e-06 58.2 131 39.7
MELO3C017577.2 Cucumis melo HOM05D001075 ORTHO05D003859 2.3e-06 57.8 123 37.4
ECA238G4732 Erigeron canadensis HOM05D001075 ORTHO05D003859 2.3e-06 57.8 154 32.5
Phvul.001G250000 Phaseolus vulgaris HOM05D001075 ORTHO05D003859 2.3e-06 57.8 140 33.6
Psat5g088640 Pisum sativum HOM05D001075 ORTHO05D003859 2.3e-06 57.8 231 28.1
Lsat_1_v5_gn_2_67741 Lactuca sativa HOM05D001075 ORTHO05D003859 3.0e-06 57.4 121 37.2
BcaNung00890 Brassica carinata HOM05D001075 ORTHO05D003859 3.9e-06 57.0 142 34.5
BolC1t00073H Brassica oleracea HOM05D001075 ORTHO05D003859 3.9e-06 57.0 143 35.0
Cc00_g21700 Coffea canephora HOM05D001075 ORTHO05D003859 5.1e-06 56.6 177 35.6
Rhsim08G0008500 Rhododendron simsii HOM05D001075 ORTHO05D003859 6.7e-06 56.2 150 36.7
ECA238G0951 Erigeron canadensis HOM05D001075 ORTHO05D003859 8.8e-06 55.8 154 33.8


User provided reference genes

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