Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G378 Amborella trichopoda HOM05D001817 ORTHO05D001647 3.3e-61 238.0 107 100.0
ATR0582G117 Amborella trichopoda HOM05D001817 ORTHO05D001647 8.1e-36 153.7 101 67.3
ATR0582G316 Amborella trichopoda HOM05D001817 ORTHO05D001647 3.8e-17 91.7 103 43.7
TAR622G1058 Trochodendron aralioides HOM05D001817 ORTHO05D001647 4.6e-15 84.7 102 37.3
TAR622G0422 Trochodendron aralioides HOM05D001817 ORTHO05D001647 2.3e-14 82.4 100 37.0
MBI18_g29804_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 3.0e-14 82.0 102 37.3
TAR371G0865 Trochodendron aralioides HOM05D001817 ORTHO05D001647 5.1e-14 81.3 102 35.3
TAR629G0897 Trochodendron aralioides HOM05D001817 ORTHO05D001647 3.3e-13 78.6 99 33.3
TAR629G2934 Trochodendron aralioides HOM05D001817 ORTHO05D001647 7.4e-13 77.4 99 33.3
MBI07_g02003_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 1.6e-12 76.3 102 34.3
HPP92_021712 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.6e-12 76.3 102 33.3
HPP92_021690 Vanilla planifolia HOM05D001817 ORTHO05D001647 2.1e-12 75.9 102 33.3
TAR622G0534 Trochodendron aralioides HOM05D001817 ORTHO05D001647 2.8e-12 75.5 104 34.6
Sed0025130 Sechium edule HOM05D001817 ORTHO05D001647 1.1e-11 73.6 100 35.0
HPP92_021711 Vanilla planifolia HOM05D001817 ORTHO05D001647 9.0e-11 70.5 101 33.7
HPP92_021691 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.2e-10 70.1 101 33.7
HPP92_015931 Vanilla planifolia HOM05D001817 ORTHO05D001647 1.5e-10 69.7 101 31.7
Phvul.002G171300 Phaseolus vulgaris HOM05D001817 ORTHO05D001647 3.4e-10 68.6 99 33.3
CDE06G0004 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 5.8e-10 67.8 104 34.6
Sed0010450 Sechium edule HOM05D001817 ORTHO05D001647 5.8e-10 67.8 99 31.3
Sed0003760 Sechium edule HOM05D001817 ORTHO05D001647 7.6e-10 67.4 100 31.0
MBI07_g02004_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 1.3e-09 66.6 102 35.3
PSO541G2996 Papaver somniferum HOM05D001817 ORTHO05D001647 1.3e-09 66.6 100 32.0
Sed0018471 Sechium edule HOM05D001817 ORTHO05D001647 1.3e-09 66.6 100 32.0
MELO3C033004.2 Cucumis melo HOM05D001817 ORTHO05D001647 2.2e-09 65.9 100 32.0
Sed0012505 Sechium edule HOM05D001817 ORTHO05D001647 2.9e-09 65.5 99 31.3
Cpa.g.sc187.6 Carica papaya HOM05D001817 ORTHO05D001647 3.8e-09 65.1 102 31.4
Ciclev10009917m.g Citrus clementina HOM05D001817 ORTHO05D001647 3.8e-09 65.1 99 30.3
Lalb_Chr12g0205721 Lupinus albus HOM05D001817 ORTHO05D001647 3.8e-09 65.1 100 32.0
Lalb_Chr13g0294691 Lupinus albus HOM05D001817 ORTHO05D001647 3.8e-09 65.1 99 33.3
Glyma.13G199700 Glycine max HOM05D001817 ORTHO05D001647 4.9e-09 64.7 99 31.3
Lalb_Chr21g0316211 Lupinus albus HOM05D001817 ORTHO05D001647 4.9e-09 64.7 99 38.4
CsaV3_6G045660 Cucumis sativus L. HOM05D001817 ORTHO05D001647 6.5e-09 64.3 100 32.0
Lj4g0011737 Lotus japonicus HOM05D001817 ORTHO05D001647 6.5e-09 64.3 99 33.3
CsaV3_3G046190 Cucumis sativus L. HOM05D001817 ORTHO05D001647 8.4e-09 63.9 99 31.3
TPR.G3595 Trifolium pratense HOM05D001817 ORTHO05D001647 1.9e-08 62.8 102 30.4
QL07p000848 Quercus lobata HOM05D001817 ORTHO05D001647 2.5e-08 62.4 99 32.3
QL07p000880 Quercus lobata HOM05D001817 ORTHO05D001647 2.5e-08 62.4 99 32.3
QL12p013638 Quercus lobata HOM05D001817 ORTHO05D001647 2.5e-08 62.4 99 32.3
PSO675G1843 Papaver somniferum HOM05D001817 ORTHO05D001647 5.5e-08 61.2 83 36.1
CDE02G0050 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 7.1e-08 60.8 99 32.3
ClCG05G016690 Citrullus lanatus HOM05D001817 ORTHO05D001647 7.1e-08 60.8 99 29.3
Lalb_Chr07g0186901 Lupinus albus HOM05D001817 ORTHO05D001647 7.1e-08 60.8 99 28.3
arahy.Tifrunner.gnm1.ann1.8VW32B Arachis hypogaea HOM05D001817 ORTHO05D001647 9.3e-08 60.5 102 31.4
Lalb_Chr21g0316231 Lupinus albus HOM05D001817 ORTHO05D001647 9.3e-08 60.5 99 34.3
Glyma.17G218100 Glycine max HOM05D001817 ORTHO05D001647 1.2e-07 60.1 101 27.7
Potri.006G257600 Populus trichocarpa HOM05D001817 ORTHO05D001647 1.2e-07 60.1 97 35.1
Psat1g016120 Pisum sativum HOM05D001817 ORTHO05D001647 1.6e-07 59.7 102 29.4
RcHm_v2.0_Chr6g0297461 Rosa chinensis HOM05D001817 ORTHO05D001647 1.6e-07 59.7 99 32.3
ATR0582G157 Amborella trichopoda HOM05D001817 ORTHO05D001647 2.7e-07 58.9 95 30.5
arahy.Tifrunner.gnm1.ann1.E0VXY6 Arachis hypogaea HOM05D001817 ORTHO05D001647 2.7e-07 58.9 100 31.0
Lj7E726T0 Lonicera japonica HOM05D001817 ORTHO05D001647 2.7e-07 58.9 99 28.3
Lj3g0023162 Lotus japonicus HOM05D001817 ORTHO05D001647 2.7e-07 58.9 99 29.3
Sc03g0006290 Simmondsia chinensis HOM05D001817 ORTHO05D001647 2.7e-07 58.9 102 29.4
PSO675G1869 Papaver somniferum HOM05D001817 ORTHO05D001647 4.6e-07 58.2 111 30.6
Glyma.10G271300 Glycine max HOM05D001817 ORTHO05D001647 6.0e-07 57.8 101 30.7
TWI63G1514 Tripterygium wilfordii HOM05D001817 ORTHO05D001647 6.0e-07 57.8 95 29.5
Prupe.1G484000 Prunus persica HOM05D001817 ORTHO05D001647 7.9e-07 57.4 99 30.3
Hund04268 Selenicereus undatus HOM05D008125 ORTHO05D010359 7.9e-07 57.4 102 29.4
AL7G28210 Arabidopsis lyrata HOM05D001648 ORTHO05D001657 1.0e-06 57.0 94 28.7
EL10Ac2g04174 Beta vulgaris HOM05D001817 ORTHO05D001647 1.0e-06 57.0 103 32.0
AT4G24972 Arabidopsis thaliana HOM05D001648 ORTHO05D001657 1.3e-06 56.6 99 28.3
Prupe.1G484100 Prunus persica HOM05D001817 ORTHO05D001647 1.3e-06 56.6 100 30.0
Thecc.02G154600 Theobroma cacao HOM05D001817 ORTHO05D001647 1.3e-06 56.6 101 31.7
Aa31LG7G10760 Aethionema arabicum HOM05D001648 ORTHO05D001657 2.3e-06 55.8 106 30.2
CDE05G3187 Ceratophyllum demersum HOM05D001817 ORTHO05D001647 2.3e-06 55.8 99 26.3
Atru.chr6.1871 Acer truncatum HOM05D001648 ORTHO05D001657 3.0e-06 55.5 101 30.7
FAN27G2147 Fragaria x ananassa HOM05D001817 ORTHO05D001647 3.9e-06 55.1 99 29.3
Gohir.A13G061900 Gossypium hirsutum HOM05D001817 ORTHO05D001647 3.9e-06 55.1 99 28.3
VMungo0720G3158 Vigna mungo HOM05D001817 ORTHO05D001647 3.9e-06 55.1 101 30.7
Glyma.08G316300 Glycine max HOM05D001817 ORTHO05D001647 5.1e-06 54.7 102 27.5
Gorai.013G068000 Gossypium raimondii HOM05D001817 ORTHO05D001647 5.1e-06 54.7 99 28.3
Rhsim08G0041600 Rhododendron simsii HOM05D000350 ORTHO05D000228 5.1e-06 54.7 103 29.1
Carub.0007s1607 Capsella rubella HOM05D001648 ORTHO05D001657 6.7e-06 54.3 101 28.7
MBI07_g01997_MAGBIO Magnolia biondii HOM05D001817 ORTHO05D001647 6.7e-06 54.3 72 34.7
Sp7g22970 Schrenkiella parvula HOM05D001648 ORTHO05D001657 8.7e-06 53.9 106 29.2


User provided reference genes

Program Settings