Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.5e-104 382.9 193 100.0
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 7.0e-30 134.8 127 58.3
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 7.0e-30 134.8 127 58.3
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.6e-29 133.7 131 55.0
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 1.6e-29 133.7 131 55.0
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.0e-29 133.3 131 55.0
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 7.8e-29 131.3 114 59.6
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 2.9e-28 129.4 127 52.8
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 2.5e-27 126.3 108 60.2
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 4.3e-27 125.6 124 54.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 5.6e-27 125.2 127 52.0
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.2e-26 124.0 128 51.6
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.1e-26 123.2 98 61.2
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 2.1e-26 123.2 128 53.9
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 2.1e-26 123.2 121 55.4
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 2.1e-26 123.2 123 52.8
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 2.1e-26 123.2 111 55.0
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 6.1e-26 121.7 110 55.5
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.1e-26 121.7 107 56.1
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 8.0e-26 121.3 124 50.8
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 8.0e-26 121.3 124 50.8
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 8.0e-26 121.3 124 50.8
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 8.0e-26 121.3 124 50.8
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 8.0e-26 121.3 124 50.8
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 1.0e-25 120.9 139 48.9
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.0e-25 120.9 113 55.8
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.0e-25 120.9 98 61.2
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.4e-25 120.6 98 63.3
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.8e-25 120.2 111 55.0
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 2.3e-25 119.8 129 46.5
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 2.3e-25 119.8 128 52.3
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 3.1e-25 119.4 111 55.9
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 4.0e-25 119.0 111 54.1
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 4.0e-25 119.0 111 53.2
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 4.0e-25 119.0 111 52.3
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 4.0e-25 119.0 111 53.2
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 5.2e-25 118.6 108 53.7
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 6.8e-25 118.2 111 55.0
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 8.9e-25 117.9 98 62.2
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 1.2e-24 117.5 104 57.7
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.2e-24 117.5 112 55.4
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.2e-24 117.5 112 55.4
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 1.2e-24 117.5 118 54.2
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.0e-24 116.7 114 52.6
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 2.6e-24 116.3 109 53.2
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 4.4e-24 115.5 111 52.3
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 5.8e-24 115.2 98 60.2
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 5.8e-24 115.2 111 51.4
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 5.8e-24 115.2 108 54.6
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 7.5e-24 114.8 98 60.2
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 7.5e-24 114.8 111 51.4
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 7.5e-24 114.8 116 51.7
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 7.5e-24 114.8 114 53.5
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 9.8e-24 114.4 95 58.9
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 9.8e-24 114.4 111 54.1
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 1.3e-23 114.0 118 52.5
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.3e-23 114.0 111 54.1
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 1.7e-23 113.6 110 51.8
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.7e-23 113.6 111 53.2
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.2e-23 113.2 111 53.2
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 2.9e-23 112.8 107 57.0
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 2.9e-23 112.8 117 49.6
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.9e-23 112.8 128 50.0
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.7e-23 112.5 118 52.5
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 4.9e-23 112.1 98 58.2
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 8.3e-23 111.3 94 56.4
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 8.3e-23 111.3 127 46.5
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.1e-22 110.9 130 47.7
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.4e-22 110.5 127 50.4
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.9e-22 110.2 128 46.9
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 1.9e-22 110.2 100 54.0
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 2.4e-22 109.8 127 46.5
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 2.4e-22 109.8 109 55.0
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 5.4e-22 108.6 126 46.8
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 1.2e-21 107.5 104 51.9
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.6e-21 107.1 121 51.2
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.6e-21 107.1 100 53.0
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 3.5e-21 105.9 115 47.8
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 3.5e-21 105.9 117 47.9
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 4.6e-21 105.5 123 43.9
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 4.6e-21 105.5 116 50.0
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 1.0e-20 104.4 98 54.1
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.3e-20 104.0 98 53.1
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.7e-20 103.6 114 48.2
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 3.0e-20 102.8 114 47.4
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 3.9e-20 102.4 108 46.3
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 3.9e-20 102.4 126 49.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 5.0e-20 102.1 114 47.4
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 5.0e-20 102.1 111 45.0
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.5e-19 100.5 89 58.4
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.9e-19 100.1 114 47.4
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 3.3e-19 99.4 123 41.5
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 4.3e-19 99.0 135 42.2
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 5.6e-19 98.6 79 60.8
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 2.8e-18 96.3 119 47.1
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 4.7e-18 95.5 91 56.0
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.1e-17 94.4 84 54.8
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 1.4e-17 94.0 160 37.5
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 1.8e-17 93.6 70 62.9
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 8.9e-17 91.3 113 47.8
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 2.6e-16 89.7 83 54.2
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.9e-15 86.3 83 48.2
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 4.9e-15 85.5 83 48.2
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 8.3e-15 84.7 83 48.2
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 9.2e-14 81.3 93 49.5
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.3e-12 77.4 127 40.9
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.7e-12 77.0 66 60.6
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 5.1e-12 75.5 72 51.4
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 8.6e-12 74.7 63 55.6
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.8e-10 69.7 64 53.1
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 6.8e-09 65.1 85 37.6
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 1.2e-08 64.3 51 56.9
ATR0559G238 Amborella trichopoda HOM05D019720 ORTHO05D008811 6.4e-07 58.5 53 52.8
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 4.1e-06 55.8 86 41.9


User provided reference genes

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