Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0582G138 Amborella trichopoda HOM05D006607 ORTHO05D008166 2.3e-50 201.8 94 100.0
ATR0618G398 Amborella trichopoda HOM05D006607 ORTHO05D008166 1.1e-44 183.0 93 91.4
Glyma.11G010000 Glycine max HOM05D006607 ORTHO05D008166 2.3e-26 122.1 89 62.9
Glyma.07G144400 Glycine max HOM05D006607 ORTHO05D008166 3.9e-26 121.3 89 62.9
Lj3P942T23 Lonicera japonica HOM05D006607 ORTHO05D008166 6.7e-26 120.6 84 65.5
VMungo1383G1434 Vigna mungo HOM05D006607 ORTHO05D008166 8.7e-26 120.2 84 63.1
Lj1g0013091 Lotus japonicus HOM05D006607 ORTHO05D008166 3.3e-25 118.2 84 61.9
Lalb_Chr19g0124781 Lupinus albus HOM05D006607 ORTHO05D008166 4.3e-25 117.9 84 60.7
COL.COLO4_14612 Corchorus olitorius HOM05D006607 ORTHO05D008166 5.6e-25 117.5 87 58.6
MD04G1146500 Malus domestica HOM05D006607 ORTHO05D008166 9.6e-25 116.7 84 60.7
FAN02G3588 Fragaria x ananassa HOM05D006607 ORTHO05D008166 1.6e-24 115.9 86 60.5
FAN05G5656 Fragaria x ananassa HOM05D006607 ORTHO05D008166 2.8e-24 115.2 86 59.3
COL.COLO4_14613 Corchorus olitorius HOM05D006607 ORTHO05D008166 3.7e-24 114.8 84 58.3
PGSC0003DMG400020353 Solanum tuberosum HOM05D006607 ORTHO05D008166 4.8e-24 114.4 84 61.9
Ciclev10013348m.g Citrus clementina HOM05D006607 ORTHO05D008166 6.2e-24 114.0 86 58.1
Potri.016G110600 Populus trichocarpa HOM05D006607 ORTHO05D008166 6.2e-24 114.0 84 59.5
Atru.chr8.2182 Acer truncatum HOM05D006607 ORTHO05D008166 8.2e-24 113.6 86 60.5
Phvul.008G108600 Phaseolus vulgaris HOM05D006607 ORTHO05D008166 8.2e-24 113.6 84 61.9
Cfa017259 Carpinus fangiana HOM05D006607 ORTHO05D008166 1.1e-23 113.2 84 60.7
FAN09G0328 Fragaria x ananassa HOM05D006607 ORTHO05D008166 1.1e-23 113.2 86 59.3
FAN23G2586 Fragaria x ananassa HOM05D006607 ORTHO05D008166 1.1e-23 113.2 93 57.0
Aa31LG5G23660 Aethionema arabicum HOM05D006607 ORTHO05D008166 1.4e-23 112.8 86 57.0
Gohir.A04G088000 Gossypium hirsutum HOM05D006607 ORTHO05D008166 1.8e-23 112.5 84 58.3
Gorai.012G111500 Gossypium raimondii HOM05D006607 ORTHO05D008166 1.8e-23 112.5 84 58.3
Medtr7g066760 Medicago truncatula HOM05D006607 ORTHO05D008166 1.8e-23 112.5 84 59.5
TWI53G2038 Tripterygium wilfordii HOM05D006607 ORTHO05D008166 1.8e-23 112.5 86 59.3
Gohir.D04G128400 Gossypium hirsutum HOM05D006607 ORTHO05D008166 2.4e-23 112.1 84 58.3
RcHm_v2.0_Chr3g0463931 Rosa chinensis HOM05D006607 ORTHO05D008166 2.4e-23 112.1 86 58.1
Cpa.g.sc56.108 Carica papaya HOM05D006607 ORTHO05D008166 3.1e-23 111.7 87 56.3
Prupe.6G270300 Prunus persica HOM05D006607 ORTHO05D008166 3.1e-23 111.7 84 59.5
Sed0009010 Sechium edule HOM05D006607 ORTHO05D008166 4.0e-23 111.3 83 61.4
Solyc09g013070.3 Solanum lycopersicum HOM05D006607 ORTHO05D008166 5.3e-23 110.9 84 59.5
Sopen09g006910 Solanum pennellii HOM05D006607 ORTHO05D008166 5.3e-23 110.9 84 59.5
Thecc.05G022900 Theobroma cacao HOM05D006607 ORTHO05D008166 5.3e-23 110.9 89 57.3
TPR.G10863 Trifolium pratense HOM05D006607 ORTHO05D008166 6.9e-23 110.5 84 57.1
CiPaw.09G205500 Carya illinoinensis HOM05D006607 ORTHO05D008166 9.0e-23 110.2 84 56.0
SGA_v2.0_scaffold85G26768 Striga asiatica HOM05D006607 ORTHO05D008166 9.0e-23 110.2 84 58.3
Migut.J00229 Erythranthe guttata HOM05D006607 ORTHO05D008166 1.2e-22 109.8 84 57.1
FvH4_6g12130 Fragaria vesca HOM05D006607 ORTHO05D008166 1.2e-22 109.8 86 58.1
Medtr4g064025 Medicago truncatula HOM05D006607 ORTHO05D008166 1.2e-22 109.8 84 58.3
MSTRG.19034 Avicennia marina HOM05D006607 ORTHO05D008166 1.5e-22 109.4 84 56.0
A04p29160 Brassica napus HOM05D006607 ORTHO05D008166 1.5e-22 109.4 88 54.5
Carub.0004s2002 Capsella rubella HOM05D006607 ORTHO05D008166 1.5e-22 109.4 88 55.7
Haze_20943 Corylus avellana HOM05D006607 ORTHO05D008166 1.5e-22 109.4 84 58.3
DCAR_015459 Daucus carota HOM05D006607 ORTHO05D008166 1.5e-22 109.4 84 56.0
Hma1.2p1_0915F.1_g236410 Hydrangea macrophylla HOM05D006607 ORTHO05D008166 1.5e-22 109.4 84 56.0
Ca_23721_v3 Cicer arietinum L. HOM05D006607 ORTHO05D008166 2.0e-22 109.0 84 59.5
THA.LOC104806524 Tarenaya hassleriana HOM05D006607 ORTHO05D008166 2.0e-22 109.0 84 54.8
BcaC02g12928 Brassica carinata HOM05D006607 ORTHO05D008166 2.6e-22 108.6 84 56.0
C04p66370 Brassica napus HOM05D006607 ORTHO05D008166 2.6e-22 108.6 84 56.0
BolC4t28142H Brassica oleracea HOM05D006607 ORTHO05D008166 2.6e-22 108.6 84 56.0
BraA04t18385Z Brassica rapa HOM05D006607 ORTHO05D008166 2.6e-22 108.6 84 56.0
Psat0s1978g0160 Pisum sativum HOM05D006607 ORTHO05D008166 2.6e-22 108.6 84 58.3
PGR031G1704 Punica granatum HOM05D006607 ORTHO05D008166 2.6e-22 108.6 93 58.1
Manes.08G087200 Manihot esculenta HOM05D006607 ORTHO05D008166 5.8e-22 107.5 84 58.3
Nn2g13597 Nelumbo nucifera HOM05D006607 ORTHO05D008166 5.8e-22 107.5 90 54.4
PSO832G1405 Papaver somniferum HOM05D006607 ORTHO05D008166 5.8e-22 107.5 84 57.1
Eucgr.D02079 Eucalyptus grandis HOM05D006607 ORTHO05D008166 7.6e-22 107.1 84 57.1
SalBow4G0305 Salvia bowleyana HOM05D006607 ORTHO05D008166 7.6e-22 107.1 84 58.3
MELO3C009194.2 Cucumis melo HOM05D006607 ORTHO05D008166 1.0e-21 106.7 85 57.6
CsaV3_3G034190 Cucumis sativus L. HOM05D006607 ORTHO05D008166 1.0e-21 106.7 85 57.6
Oeu040800.1 Olea europaea HOM05D006607 ORTHO05D008166 1.0e-21 106.7 84 53.6
PSO063G7329 Papaver somniferum HOM05D006607 ORTHO05D008166 1.0e-21 106.7 84 56.0
CSS0045140 Camellia sinensis var. sinensis HOM05D006607 ORTHO05D008166 1.3e-21 106.3 84 57.1
ClCG10G021810 Citrullus lanatus HOM05D006607 ORTHO05D008166 1.3e-21 106.3 84 58.3
Sabra16G0107200 Salix brachista HOM05D006607 ORTHO05D008166 1.3e-21 106.3 84 56.0
GSVIVG01034016001 Vitis vinifera HOM05D006607 ORTHO05D008166 1.3e-21 106.3 85 56.5
Duzib128G1357 Durio zibethinus HOM05D006607 ORTHO05D008166 2.2e-21 105.5 84 54.8
SHI12779 Sapria himalayana HOM05D006607 ORTHO05D008166 2.2e-21 105.5 84 54.8
CANSAT35G1770 Cannabis sativa HOM05D006607 ORTHO05D008166 2.9e-21 105.1 84 56.0
CARHR132620 Cardamine hirsuta HOM05D006607 ORTHO05D008166 2.9e-21 105.1 84 53.6
Sp4g20370 Schrenkiella parvula HOM05D006607 ORTHO05D008166 3.8e-21 104.8 88 52.3
CDE04G3256 Ceratophyllum demersum HOM05D006607 ORTHO05D008166 4.9e-21 104.4 92 51.1
AL4G35050 Arabidopsis lyrata HOM05D006607 ORTHO05D008166 1.1e-20 103.2 88 51.1
AT2G38050 Arabidopsis thaliana HOM05D006607 ORTHO05D008166 1.1e-20 103.2 88 51.1
Rhsim05G0205400 Rhododendron simsii HOM05D006607 ORTHO05D008166 1.9e-20 102.4 86 58.1
BcaC02g12917 Brassica carinata HOM05D006607 ORTHO05D008166 2.5e-20 102.1 84 53.6
Thhalv10017092m.g Eutrema salsugineum HOM05D006607 ORTHO05D008166 2.5e-20 102.1 88 50.0
CAN.G284.7 Capsicum annuum HOM05D006607 ORTHO05D008166 5.5e-20 100.9 84 54.8
Lsat_1_v5_gn_5_155401 Lactuca sativa HOM05D006607 ORTHO05D008166 7.1e-20 100.5 84 50.0
ECA248G0524 Erigeron canadensis HOM05D006607 ORTHO05D008166 9.3e-20 100.1 84 51.2
Cc06_g01710 Coffea canephora HOM05D006607 ORTHO05D008166 7.9e-19 97.1 84 50.0
Potri.013G134433 Populus trichocarpa HOM05D006607 ORTHO05D008166 7.9e-19 97.1 84 50.0
HPP92_018606 Vanilla planifolia HOM05D006607 ORTHO05D008166 1.0e-18 96.7 90 48.9
MBI05_g03439_MAGBIO Magnolia biondii HOM05D006607 ORTHO05D008166 5.1e-18 94.4 86 54.7
Sc07g0006860 Simmondsia chinensis HOM05D006607 ORTHO05D008166 6.7e-18 94.0 84 51.2
Aqoxy7G01420 Aquilegia oxysepala HOM05D006607 ORTHO05D008166 8.7e-18 93.6 84 47.6
Potri.005G047800 Populus trichocarpa HOM05D006607 ORTHO05D008166 2.8e-16 88.6 84 46.4
CDE02G1809 Ceratophyllum demersum HOM05D000642 ORTHO05D008166 3.7e-16 88.2 92 43.5
unitig_27.g24814 Utricularia gibba HOM05D006607 ORTHO05D008166 3.7e-16 88.2 84 46.4
AUR62011054 Chenopodium quinoa HOM05D006607 ORTHO05D008166 1.2e-14 83.2 89 42.7
Peaxi162Scf00330g00043 Petunia axillaris HOM05D006607 ORTHO05D008166 1.2e-14 83.2 76 50.0
AUR62033432 Chenopodium quinoa HOM05D006607 ORTHO05D008166 2.6e-14 82.0 93 40.9
Os01g0851600 Oryza sativa ssp. japonica HOM05D006607 ORTHO05D008166 2.9e-13 78.6 63 57.1
Ah.09g227670 Amaranthus hybridus HOM05D006607 ORTHO05D008166 6.5e-13 77.4 84 44.0
Os11g0184100 Oryza sativa ssp. japonica HOM05D006607 ORTHO05D008166 3.2e-12 75.1 60 58.3
SEGI_31326 Sequoiadendron giganteum HOM05D006607 ORTHO05D008166 5.5e-12 74.3 81 44.4
Solyc10g086500.1 Solanum lycopersicum HOM05D006607 ORTHO05D008166 2.3e-10 68.9 87 39.1
CAN.G1195.9 Capsicum annuum HOM05D006607 ORTHO05D008166 1.1e-09 66.6 87 40.2
Sopen10g035880 Solanum pennellii HOM05D006607 ORTHO05D008166 2.5e-09 65.5 67 44.8
CAN.G1195.8 Capsicum annuum HOM05D006607 ORTHO05D008166 4.3e-09 64.7 89 40.4
Atru.chr7.292 Acer truncatum HOM05D006607 ORTHO05D008166 1.3e-08 63.2 43 67.4
PGSC0003DMG400019202 Solanum tuberosum HOM05D006607 ORTHO05D008166 1.7e-08 62.8 67 43.3
AagrBONN_evm.TU.Sc2ySwM_344.4222 Anthoceros agrestis HOM05D006607 ORTHO05D008166 3.7e-08 61.6 68 44.1


User provided reference genes

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