Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0580G047 Amborella trichopoda HOM05D005537 ORTHO05D006776 0.0e+00 1356.3 726 100.0
CDE05G3054 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 1.0e-110 405.2 716 39.2
Dinv25489 Davidia involucrata HOM05D005537 ORTHO05D006776 6.4e-108 396.0 716 40.1
TAR624G0592 Trochodendron aralioides HOM05D005537 ORTHO05D006776 3.2e-107 393.7 725 39.2
CDE05G2659 Ceratophyllum demersum HOM05D005537 ORTHO05D006776 1.2e-106 391.7 716 38.5
PSO063G7542 Papaver somniferum HOM05D005537 ORTHO05D006776 3.2e-99 367.1 713 39.8
SEGI_41129 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 3.5e-98 363.6 716 36.9
Aqoxy5G04373 Aquilegia oxysepala HOM05D005537 ORTHO05D006776 4.6e-98 363.2 724 38.8
PSO170G0047 Papaver somniferum HOM05D005537 ORTHO05D006776 7.8e-98 362.5 713 38.4
Cfa013489 Carpinus fangiana HOM05D005537 ORTHO05D006776 1.0e-97 362.1 731 37.5
Haze_22074 Corylus avellana HOM05D005537 ORTHO05D006776 1.9e-96 357.8 722 38.4
Manes.02G080100 Manihot esculenta HOM05D005537 ORTHO05D006776 5.6e-96 356.3 721 35.6
VMungo1215G0900 Vigna mungo HOM05D005537 ORTHO05D006776 7.3e-96 355.9 720 37.2
CANSAT01G2612 Cannabis sativa HOM05D005537 ORTHO05D006776 1.5e-93 348.2 698 36.8
Thecc.08G084500 Theobroma cacao HOM05D005537 ORTHO05D006776 1.7e-92 344.7 726 36.5
TWI63G1753 Tripterygium wilfordii HOM05D005537 ORTHO05D006776 1.7e-92 344.7 728 37.8
RhsimUnG0132200 Rhododendron simsii HOM05D005537 ORTHO05D006776 4.1e-91 340.1 723 36.5
Rhsim08G0162000 Rhododendron simsii HOM05D005537 ORTHO05D006776 1.2e-90 338.6 718 36.2
ClCG11G011540 Citrullus lanatus HOM05D005537 ORTHO05D006776 1.6e-90 338.2 717 34.6
CiPaw.07G200800 Carya illinoinensis HOM05D005537 ORTHO05D006776 2.1e-90 337.8 726 37.7
Lju50A4T51 Lonicera japonica HOM05D005537 ORTHO05D006776 3.5e-90 337.0 727 35.9
CSS0045027 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 6.0e-90 336.3 734 36.4
CSS0042006 Camellia sinensis var. sinensis HOM05D005537 ORTHO05D006776 7.8e-90 335.9 734 36.4
Glyma.13G103200 Glycine max HOM05D005537 ORTHO05D006776 7.8e-90 335.9 722 37.0
Prupe.1G069700 Prunus persica HOM05D005537 ORTHO05D006776 1.7e-89 334.7 678 37.3
MELO3C003946.2 Cucumis melo HOM05D005537 ORTHO05D006776 2.3e-89 334.3 718 35.4
Gohir.D06G023000 Gossypium hirsutum HOM05D005537 ORTHO05D006776 2.3e-89 334.3 719 33.5
Ciclev10010385m.g Citrus clementina HOM05D005537 ORTHO05D006776 3.0e-89 334.0 723 36.5
Gohir.A06G025900 Gossypium hirsutum HOM05D005537 ORTHO05D006776 2.5e-88 330.9 719 33.5
Atru.chr2.2727 Acer truncatum HOM05D005537 ORTHO05D006776 3.3e-88 330.5 729 36.2
Gorai.002G136300 Gossypium raimondii HOM05D005537 ORTHO05D006776 3.3e-88 330.5 719 33.9
MD16G1242600 Malus domestica HOM05D005537 ORTHO05D006776 4.3e-88 330.1 680 36.3
COL.COLO4_28459 Corchorus olitorius HOM05D005537 ORTHO05D006776 5.6e-88 329.7 724 34.8
Gorai.010G027600 Gossypium raimondii HOM05D005537 ORTHO05D006776 5.6e-88 329.7 719 33.8
DCAR_017989 Daucus carota HOM05D005537 ORTHO05D006776 9.5e-88 328.9 721 34.4
PGR044G0610 Punica granatum HOM05D005537 ORTHO05D006776 9.5e-88 328.9 697 35.9
MD13G1237200 Malus domestica HOM05D005537 ORTHO05D006776 1.6e-87 328.2 685 35.9
HPP92_018575 Vanilla planifolia HOM05D005537 ORTHO05D006776 2.1e-87 327.8 744 35.6
TPR.G37121 Trifolium pratense HOM05D005537 ORTHO05D006776 6.2e-87 326.2 726 36.2
vmacro19325 Vaccinium macrocarpon HOM05D005537 ORTHO05D006776 2.3e-86 324.3 684 36.5
QL11p009893 Quercus lobata HOM05D005537 ORTHO05D006776 4.0e-86 323.6 731 35.0
MBI14_g19455_MAGBIO Magnolia biondii HOM05D005537 ORTHO05D006776 5.2e-86 323.2 685 38.5
Duzib041G0776 Durio zibethinus HOM05D005537 ORTHO05D006776 8.9e-86 322.4 723 35.0
THA.LOC104799619 Tarenaya hassleriana HOM05D005537 ORTHO05D006776 1.2e-85 322.0 683 34.3
Sed0009431 Sechium edule HOM05D005537 ORTHO05D006776 3.4e-85 320.5 709 34.4
FAN17G0445 Fragaria x ananassa HOM05D005537 ORTHO05D006776 5.8e-85 319.7 692 36.3
arahy.Tifrunner.gnm1.ann1.HQKU7C Arachis hypogaea HOM05D005537 ORTHO05D006776 7.6e-85 319.3 730 34.7
Peaxi162Scf00231g10125 Petunia axillaris HOM05D005537 ORTHO05D006776 6.4e-84 316.2 726 33.3
Sed0014380 Sechium edule HOM05D005537 ORTHO05D006776 6.4e-84 316.2 713 33.9
Duzib093G2104 Durio zibethinus HOM05D005537 ORTHO05D006776 8.4e-84 315.8 721 34.0
Lalb_Chr13g0299751 Lupinus albus HOM05D005537 ORTHO05D006776 1.4e-83 315.1 725 35.4
Ah.09g230210 Amaranthus hybridus HOM05D005537 ORTHO05D006776 2.4e-83 314.3 714 33.6
Psat4g004960 Pisum sativum HOM05D005537 ORTHO05D006776 2.4e-83 314.3 723 35.5
arahy.Tifrunner.gnm1.ann1.W452X0 Arachis hypogaea HOM05D005537 ORTHO05D006776 3.2e-83 313.9 730 34.2
Ca_21044_v3 Cicer arietinum L. HOM05D005537 ORTHO05D006776 4.1e-83 313.5 723 35.5
Nn8g40421 Nelumbo nucifera HOM05D005537 ORTHO05D006776 1.6e-82 311.6 724 35.5
Nitab4.5_0000055g0260 Nicotiana tabacum HOM05D005537 ORTHO05D006776 2.1e-82 311.2 738 33.7
Potri.012G036500 Populus trichocarpa HOM05D005537 ORTHO05D006776 2.1e-82 311.2 720 34.4
Gohir.A01G123800 Gossypium hirsutum HOM05D005537 ORTHO05D006776 3.5e-82 310.5 720 32.6
ECA233G0023 Erigeron canadensis HOM05D005537 ORTHO05D006776 1.3e-81 308.5 713 34.4
FAN07G2345 Fragaria x ananassa HOM05D005537 ORTHO05D006776 2.3e-81 307.8 682 34.9
Sc18g0003000 Simmondsia chinensis HOM05D005537 ORTHO05D006776 3.0e-81 307.4 727 34.4
HanXRQChr13g0401171 Helianthus annuus HOM05D005537 ORTHO05D006776 5.1e-81 306.6 726 35.3
Cc06_g13120 Coffea canephora HOM05D005537 ORTHO05D006776 6.6e-81 306.2 723 36.0
FAN12G0761 Fragaria x ananassa HOM05D005537 ORTHO05D006776 8.6e-81 305.8 692 36.3
FAN22G0220 Fragaria x ananassa HOM05D005537 ORTHO05D006776 8.6e-81 305.8 692 36.1
FvH4_4g06690 Fragaria vesca HOM05D005537 ORTHO05D006776 2.5e-80 304.3 692 36.1
Sabra12G0025000 Salix brachista HOM05D005537 ORTHO05D006776 3.3e-80 303.9 715 33.8
Medtr4g133100 Medicago truncatula HOM05D005537 ORTHO05D006776 4.3e-80 303.5 726 33.5
Thhalv10013208m.g Eutrema salsugineum HOM05D005537 ORTHO05D006776 2.1e-79 301.2 703 32.4
AT5G20600 Arabidopsis thaliana HOM05D005537 ORTHO05D006776 2.8e-79 300.8 697 32.4
BolC9t58429H Brassica oleracea HOM05D005537 ORTHO05D006776 4.7e-79 300.1 709 33.6
Nitab4.5_0004772g0040 Nicotiana tabacum HOM05D005537 ORTHO05D006776 6.2e-79 299.7 745 34.5
C09p55630 Brassica napus HOM05D005537 ORTHO05D006776 1.8e-78 298.1 707 33.2
BcaC04g19447 Brassica carinata HOM05D005537 ORTHO05D006776 2.4e-78 297.7 709 33.4
Lsat_1_v5_gn_6_25660 Lactuca sativa HOM05D005537 ORTHO05D006776 2.4e-78 297.7 732 33.3
Carub.0006s1893 Capsella rubella HOM05D005537 ORTHO05D006776 3.1e-78 297.4 711 32.9
Sp6g23880 Schrenkiella parvula HOM05D005537 ORTHO05D006776 3.1e-78 297.4 701 32.8
Eucgr.C02216 Eucalyptus grandis HOM05D005537 ORTHO05D006776 4.0e-78 297.0 726 35.1
MSTRG.26216 Avicennia marina HOM05D005537 ORTHO05D006776 6.9e-78 296.2 726 33.9
Lj2g0020928 Lotus japonicus HOM05D005537 ORTHO05D006776 6.9e-78 296.2 733 33.7
Aa31LG1G14080 Aethionema arabicum HOM05D005537 ORTHO05D006776 9.0e-78 295.8 677 33.7
CARHR192210 Cardamine hirsuta HOM05D005537 ORTHO05D006776 1.2e-77 295.4 701 33.0
PGSC0003DMG400004098 Solanum tuberosum HOM05D005537 ORTHO05D006776 1.2e-77 295.4 717 33.3
BraA10t44018Z Brassica rapa HOM05D005537 ORTHO05D006776 1.7e-76 291.6 705 32.2
Sopen07g006800 Solanum pennellii HOM05D005537 ORTHO05D006776 2.2e-76 291.2 713 32.8
A10p19410 Brassica napus HOM05D005537 ORTHO05D006776 2.9e-76 290.8 707 32.2
Sabra15G0023400 Salix brachista HOM05D005537 ORTHO05D006776 3.8e-76 290.4 730 33.4
Solyc07g017940.1 Solanum lycopersicum HOM05D005537 ORTHO05D006776 4.9e-76 290.0 728 32.6
AL6G32140 Arabidopsis lyrata HOM05D005537 ORTHO05D006776 8.4e-76 289.3 705 31.8
BcaB08g36512 Brassica carinata HOM05D005537 ORTHO05D006776 1.1e-75 288.9 703 32.6
SGA_v2.0_scaffold17G07935 Striga asiatica HOM05D005537 ORTHO05D006776 9.3e-75 285.8 733 32.9
SGA_v2.0_scaffold12G06075 Striga asiatica HOM05D005537 ORTHO05D006776 1.6e-74 285.0 732 32.7
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 2.1e-74 284.6 305 49.5
CsaV3_2G008990 Cucumis sativus L. HOM05D005537 ORTHO05D006776 4.3e-72 276.9 296 48.3
AUR62021325 Chenopodium quinoa HOM05D005537 ORTHO05D006776 7.3e-72 276.2 719 32.0
RcHm_v2.0_Chr4g0398601 Rosa chinensis HOM05D005537 ORTHO05D006776 7.3e-72 276.2 305 47.9
Migut.K00238 Erythranthe guttata HOM05D005537 ORTHO05D006776 1.3e-71 275.4 727 31.2
Cpa.g.sc115.49 Carica papaya HOM05D005537 ORTHO05D006776 4.8e-71 273.5 447 39.8
SHI03078 Sapria himalayana HOM05D005537 ORTHO05D006776 1.4e-70 271.9 677 34.0
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.0e-69 268.1 714 30.8
Gohir.D01G111500 Gossypium hirsutum HOM05D005537 ORTHO05D006776 5.8e-69 266.5 446 37.4
Pp3c12_970 Physcomitrium patens HOM05D005537 ORTHO05D006776 8.4e-68 262.7 735 31.0
SEGI_27163 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 7.1e-67 259.6 713 30.0
Os04g0658600 Oryza sativa ssp. japonica HOM05D005537 ORTHO05D006776 3.5e-66 257.3 711 31.8
CAN.G1186.23 Capsicum annuum HOM05D005537 ORTHO05D006776 1.0e-65 255.8 735 31.6
Mapoly0006s0254 Marchantia polymorpha HOM05D005537 ORTHO05D006776 2.3e-65 254.6 718 31.2
CiPaw.08G029800 Carya illinoinensis HOM05D005537 ORTHO05D006776 3.9e-65 253.8 446 37.9
unitig_899.g15473 Utricularia gibba HOM05D005537 ORTHO05D006776 5.6e-64 250.0 716 32.0
TPR.G1254 Trifolium pratense HOM05D005537 ORTHO05D006776 1.1e-62 245.7 714 31.2
Lju432C4G13 Lonicera japonica HOM05D005537 ORTHO05D006776 4.5e-61 240.4 254 50.8
Zm00001eb067650 Zea mays HOM05D005537 ORTHO05D006776 4.5e-61 240.4 717 31.7
AagrBONN_evm.TU.Sc2ySwM_228.2028 Anthoceros agrestis HOM05D005537 ORTHO05D006776 7.6e-61 239.6 743 31.0
Psat2g005880 Pisum sativum HOM05D005537 ORTHO05D006776 7.1e-59 233.0 701 30.2
Actinidia01575 Actinidia chinensis HOM05D005537 ORTHO05D006776 1.6e-58 231.9 735 30.3
Pp3c17_1280 Physcomitrium patens HOM05D005537 ORTHO05D006776 3.3e-56 224.2 332 40.1
A03p10160 Brassica napus HOM05D005537 ORTHO05D006776 1.3e-52 212.2 280 41.8
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 2.9e-52 211.1 696 28.4
Psat2g005840 Pisum sativum HOM05D005537 ORTHO05D006776 4.9e-52 210.3 276 43.8
SMO012G0033 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 1.1e-51 209.1 284 40.5
unitig_746.g26559 Utricularia gibba HOM05D005537 ORTHO05D006776 1.6e-50 205.3 271 42.8
BraA03t10326Z Brassica rapa HOM05D005537 ORTHO05D006776 1.8e-49 201.8 205 50.7
Zm00001eb432550 Zea mays HOM05D005537 ORTHO05D006776 5.3e-46 190.3 335 38.8
BcaB01g04778 Brassica carinata HOM05D005537 ORTHO05D006776 4.3e-40 170.6 297 35.4
MELO3C020712.2 Cucumis melo HOM05D005537 ORTHO05D006776 9.7e-40 169.5 164 49.4
SEGI_03037 Sequoiadendron giganteum HOM05D005537 ORTHO05D006776 2.8e-39 167.9 679 27.0
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 4.5e-37 160.6 614 28.0
CBR_g32208 Chara braunii HOM05D005537 ORTHO05D006776 1.2e-34 152.5 279 35.8
Cc00_g32040 Coffea canephora HOM05D005537 ORTHO05D006776 2.1e-34 151.8 146 50.0
Cre01.g019200 Chlamydomonas reinhardtii HOM05D005537 ORTHO05D006776 6.1e-34 150.2 275 34.5
FvH4_5g34681 Fragaria vesca HOM05D005537 ORTHO05D006776 1.0e-25 122.9 131 48.9
SMO172G0175 Selaginella moellendorffii HOM05D005537 ORTHO05D006776 1.0e-25 122.9 242 31.0
Glyma.17G055832 Glycine max HOM05D005537 ORTHO05D006776 1.3e-23 115.9 215 41.4
Oeu009853.2 Olea europaea HOM05D005537 ORTHO05D006776 2.8e-23 114.8 220 39.1
PRCOL_00002161 Prasinoderma coloniale HOM05D005537 ORTHO05D006776 8.2e-23 113.2 297 28.3
MCO12G389 Micromonas commoda HOM05D005537 ORTHO05D006776 9.4e-19 99.8 175 31.4
EL10Ac8g18309 Beta vulgaris HOM05D005537 ORTHO05D006776 1.2e-18 99.4 561 24.2
FvH4_2g25020 Fragaria vesca HOM05D005537 ORTHO05D006776 5.2e-17 94.0 87 49.4
FAN24G0683 Fragaria x ananassa HOM05D005537 ORTHO05D006776 5.2e-17 94.0 87 49.4
unitig_746.g26560 Utricularia gibba HOM05D005537 ORTHO05D006776 1.1e-11 76.3 92 45.7


User provided reference genes

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