Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 7.3e-67 257.7 196 100.0
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 5.1e-60 235.0 196 92.9
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 1.2e-58 230.3 196 91.8
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 6.2e-58 228.0 196 92.3
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 1.8e-57 226.5 196 89.8
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 3.1e-57 225.7 194 90.7
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 8.9e-57 224.2 196 90.8
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 1.2e-56 223.8 194 91.8
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 1.2e-56 223.8 194 91.2
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 2.6e-56 222.6 194 90.2
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 3.4e-56 222.2 194 90.2
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 5.8e-56 221.5 196 90.3
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 5.8e-56 221.5 205 87.3
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 5.8e-56 221.5 196 89.8
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 1.3e-55 220.3 196 89.8
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 1.7e-55 219.9 196 85.2
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 2.9e-55 219.2 196 89.8
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 2.9e-55 219.2 196 89.8
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 2.9e-55 219.2 196 90.3
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 4.9e-55 218.4 196 89.3
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 6.4e-55 218.0 196 89.3
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 6.4e-55 218.0 209 69.4
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 6.4e-55 218.0 196 83.7
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 8.4e-55 217.6 196 88.8
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 8.4e-55 217.6 196 88.8
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 8.4e-55 217.6 196 89.8
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 1.4e-54 216.9 196 89.3
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 2.4e-54 216.1 196 84.7
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 4.2e-54 215.3 196 88.3
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 5.4e-54 214.9 196 87.8
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 5.4e-54 214.9 196 88.8
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 7.1e-54 214.5 196 89.3
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 7.1e-54 214.5 196 88.8
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 9.2e-54 214.2 196 88.8
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 9.2e-54 214.2 195 89.7
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 1.2e-53 213.8 196 84.7
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 1.6e-53 213.4 194 87.6
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 2.1e-53 213.0 196 84.7
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 3.5e-53 212.2 194 87.6
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 6.0e-53 211.5 196 87.2
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 6.0e-53 211.5 194 88.7
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 6.0e-53 211.5 194 85.1
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 6.0e-53 211.5 196 87.8
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 6.0e-53 211.5 196 85.7
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 7.8e-53 211.1 196 88.3
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 7.8e-53 211.1 194 88.1
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 1.0e-52 210.7 195 88.2
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 1.0e-52 210.7 194 88.7
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 1.7e-52 209.9 196 87.8
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 3.0e-52 209.1 196 87.8
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.0e-52 209.1 196 87.8
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.0e-52 209.1 196 87.8
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 3.0e-52 209.1 196 79.6
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 3.0e-52 209.1 196 80.6
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 3.9e-52 208.8 196 87.2
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 3.9e-52 208.8 196 87.2
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 6.6e-52 208.0 194 88.7
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 6.6e-52 208.0 237 51.5
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 3.3e-51 205.7 194 73.2
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 87.6
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 87.6
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 87.6
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 87.6
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 87.6
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 87.6
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 4.3e-51 205.3 194 72.7
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 4.3e-51 205.3 192 83.9
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 4.3e-51 205.3 192 88.0
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 7.3e-51 204.5 194 86.1
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 7.3e-51 204.5 194 86.6
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 7.3e-51 204.5 182 86.8
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 9.6e-51 204.1 196 73.0
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 9.6e-51 204.1 194 87.6
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 1.6e-50 203.4 194 86.1
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 1.6e-50 203.4 196 85.7
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 2.8e-50 202.6 196 86.2
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 1.4e-49 200.3 196 70.9
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.8e-49 199.9 232 59.9
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.4e-49 199.5 192 72.9
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 5.3e-49 198.4 194 86.1
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 6.9e-49 198.0 202 71.8
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 8.4e-47 191.0 193 68.9
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 1.4e-46 190.3 196 84.7
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 2.4e-46 189.5 194 64.4
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 3.2e-46 189.1 192 68.8
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 4.6e-45 185.3 193 66.8
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.3e-44 183.7 187 62.6
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 4.3e-43 178.7 189 77.8
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 9.6e-43 177.6 92 92.4
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 2.1e-42 176.4 94 90.4
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 2.8e-42 176.0 279 42.3
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 4.5e-40 168.7 94 87.2
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 4.5e-40 168.7 94 87.2
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 4.9e-39 165.2 85 91.8
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 1.1e-38 164.1 88 90.9
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 6.0e-37 158.3 85 90.6
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 4.3e-35 152.1 85 87.1
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 2.0e-32 143.3 164 53.7
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 4.0e-25 119.0 159 53.5
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 3.4e-24 115.9 154 70.1
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 9.3e-22 107.8 132 62.1
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 3.7e-18 95.9 132 87.9
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 2.9e-15 86.3 131 85.5
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 1.2e-13 80.9 93 54.8
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.6e-13 80.5 45 86.7
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 4.6e-13 79.0 45 84.4
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 6.1e-13 78.6 45 84.4
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 2.3e-12 76.6 167 45.5
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 2.0e-11 73.6 45 80.0
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 1.3e-10 70.9 45 73.3
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 1.1e-09 67.8 44 70.5
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 3.4e-08 62.8 32 96.9
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.0e-07 61.2 54 61.1
MCO04G309 Micromonas commoda HOM05D007062 ORTHO05D008941 6.5e-07 58.5 53 56.6


User provided reference genes

Program Settings