Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 9.8e-49 196.4 96 100.0
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.7e-32 142.5 96 72.9
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 2.5e-28 128.6 91 67.0
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 2.5e-28 128.6 92 68.5
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 3.3e-28 128.3 91 68.1
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 4.3e-28 127.9 91 62.6
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 2.1e-27 125.6 91 63.7
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 2.8e-27 125.2 92 65.2
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 4.7e-27 124.4 92 66.3
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 6.2e-27 124.0 91 63.7
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 8.0e-27 123.6 92 65.2
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 8.0e-27 123.6 92 65.2
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 8.0e-27 123.6 91 65.9
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.1e-26 123.2 92 64.1
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.1e-26 123.2 92 64.1
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 1.1e-26 123.2 92 64.1
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 1.1e-26 123.2 90 60.0
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 1.1e-26 123.2 95 61.1
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.4e-26 122.9 93 65.6
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 1.4e-26 122.9 88 65.9
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 2.3e-26 122.1 88 62.5
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.3e-26 122.1 91 60.4
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 2.3e-26 122.1 95 58.9
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.1e-26 121.7 92 64.1
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.1e-26 121.7 92 64.1
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 3.1e-26 121.7 92 65.2
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 4.0e-26 121.3 91 64.8
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 5.2e-26 120.9 91 59.3
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 5.2e-26 120.9 91 59.3
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 5.2e-26 120.9 91 60.4
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 6.8e-26 120.6 91 62.6
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 6.8e-26 120.6 93 63.4
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 6.8e-26 120.6 79 65.8
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 6.8e-26 120.6 91 65.9
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 6.8e-26 120.6 91 67.0
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 8.9e-26 120.2 95 62.1
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 8.9e-26 120.2 91 62.6
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 8.9e-26 120.2 95 61.1
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 8.9e-26 120.2 91 58.2
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 8.9e-26 120.2 95 58.9
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 8.9e-26 120.2 93 61.3
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.9e-26 120.2 91 59.3
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 1.5e-25 119.4 95 60.0
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.5e-25 119.4 90 58.9
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.5e-25 119.4 91 56.0
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 2.0e-25 119.0 88 60.2
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 2.0e-25 119.0 95 57.9
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 2.0e-25 119.0 94 58.5
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 2.6e-25 118.6 91 61.5
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 2.6e-25 118.6 91 62.6
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.6e-25 118.6 88 60.2
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.6e-25 118.6 88 60.2
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.6e-25 118.6 92 57.6
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 2.6e-25 118.6 91 64.8
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 2.6e-25 118.6 98 64.3
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.6e-25 118.6 101 60.4
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 3.4e-25 118.2 91 60.4
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 3.4e-25 118.2 91 54.9
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.4e-25 118.2 91 54.9
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.4e-25 118.2 90 66.7
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 4.4e-25 117.9 95 57.9
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 4.4e-25 117.9 88 60.2
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 4.4e-25 117.9 91 57.1
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 4.4e-25 117.9 91 63.7
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 5.8e-25 117.5 91 60.4
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 5.8e-25 117.5 91 57.1
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 5.8e-25 117.5 97 63.9
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 7.5e-25 117.1 91 58.2
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 7.5e-25 117.1 92 56.5
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 7.5e-25 117.1 88 60.2
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 7.5e-25 117.1 88 60.2
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.5e-25 117.1 91 58.2
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 7.5e-25 117.1 91 62.6
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 9.8e-25 116.7 91 62.6
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.3e-24 116.3 91 60.4
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 1.3e-24 116.3 93 60.2
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 1.3e-24 116.3 91 56.0
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.3e-24 116.3 91 58.2
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.3e-24 116.3 91 59.3
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.3e-24 116.3 91 59.3
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.7e-24 115.9 91 59.3
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.7e-24 115.9 91 59.3
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 1.7e-24 115.9 95 56.8
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 1.7e-24 115.9 93 61.3
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.2e-24 115.5 92 60.9
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.7e-24 114.8 91 58.2
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 3.7e-24 114.8 91 56.0
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 3.7e-24 114.8 92 59.8
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 3.7e-24 114.8 91 61.5
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 4.9e-24 114.4 91 57.1
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.9e-24 114.4 92 59.8
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 4.9e-24 114.4 94 59.6
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 4.9e-24 114.4 91 58.2
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 6.4e-24 114.0 91 59.3
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 6.4e-24 114.0 91 58.2
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 6.4e-24 114.0 91 58.2
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 6.4e-24 114.0 91 58.2
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 6.4e-24 114.0 91 59.3
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 6.4e-24 114.0 91 57.1
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 6.4e-24 114.0 90 57.8
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 6.4e-24 114.0 92 58.7
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 6.4e-24 114.0 79 64.6
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 8.3e-24 113.6 88 56.8
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.1e-23 113.2 91 59.3
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.4e-23 112.8 91 59.3
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 1.4e-23 112.8 95 55.8
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.4e-23 112.8 91 59.3
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.4e-23 112.8 90 58.9
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.4e-23 112.8 95 58.9
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 1.9e-23 112.5 91 58.2
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.9e-23 112.5 91 56.0
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 2.4e-23 112.1 91 57.1
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 3.2e-23 111.7 88 56.8
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 3.2e-23 111.7 78 64.1
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 3.2e-23 111.7 90 57.8
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 3.2e-23 111.7 90 57.8
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 4.1e-23 111.3 79 63.3
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 4.1e-23 111.3 91 59.3
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.1e-23 111.3 90 62.2
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 4.1e-23 111.3 91 57.1
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 5.4e-23 110.9 79 64.6
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 5.4e-23 110.9 91 57.1
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 5.4e-23 110.9 91 57.1
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 5.4e-23 110.9 79 62.0
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 7.1e-23 110.5 95 54.7
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 7.1e-23 110.5 91 57.1
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 7.1e-23 110.5 92 58.7
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 9.2e-23 110.2 95 55.8
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.6e-22 109.4 91 56.0
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 3.5e-22 108.2 91 54.9
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 3.5e-22 108.2 91 56.0
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 3.5e-22 108.2 95 55.8
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 4.6e-22 107.8 91 56.0
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 4.6e-22 107.8 91 56.0
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 6.0e-22 107.5 80 61.2
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 6.0e-22 107.5 91 56.0
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.3e-21 106.3 78 61.5
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.7e-21 105.9 80 60.0
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 1.7e-21 105.9 91 52.7
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.3e-21 105.5 91 53.8
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.0e-21 105.1 80 61.2
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 1.1e-20 103.2 80 57.5
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 1.5e-20 102.8 88 53.4
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 1.5e-20 102.8 80 57.5
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 2.5e-20 102.1 91 49.5
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 3.3e-20 101.7 79 55.7
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 4.7e-19 97.8 81 59.3
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 8.1e-19 97.1 78 57.7
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 1.1e-18 96.7 96 50.0
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 3.1e-18 95.1 83 55.4
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 3.1e-18 95.1 64 67.2
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.0e-18 94.7 73 58.9
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 5.2e-18 94.4 97 49.5
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 6.8e-18 94.0 96 47.9
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 8.9e-18 93.6 83 55.4
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.0e-17 92.4 79 57.0
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 5.8e-17 90.9 82 56.1
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 9.9e-17 90.1 79 59.5
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.3e-16 89.7 73 56.2
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 8.3e-16 87.0 79 53.2
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 1.6e-14 82.8 67 50.7
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.5e-14 81.6 60 58.3
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 1.0e-13 80.1 72 52.8
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 6.6e-13 77.4 73 41.1
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.5e-12 76.3 52 71.2
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 1.5e-12 76.3 52 71.2
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 3.3e-12 75.1 82 39.0
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 4.3e-12 74.7 71 45.1
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.5e-09 66.2 72 47.2
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.7e-08 62.8 66 36.4
SEGI_28711 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 8.4e-08 60.5 47 57.4
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 7.1e-07 57.4 60 38.3
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 1.6e-06 56.2 35 65.7


User provided reference genes

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