Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0322G028 Amborella trichopoda HOM05D003776 ORTHO05D004459 2.5e-93 345.5 183 100.0
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 3.4e-42 175.6 174 58.0
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 9.9e-42 174.1 167 55.7
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 5.4e-40 168.3 173 56.1
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 5.4e-40 168.3 171 55.6
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 3.5e-39 165.6 171 55.6
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 3.5e-39 165.6 188 53.7
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 7.8e-39 164.5 171 54.4
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 7.8e-39 164.5 171 56.1
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 1.0e-38 164.1 186 53.2
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 1.0e-38 164.1 186 53.2
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 5.1e-38 161.8 171 54.4
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 6.6e-38 161.4 176 53.4
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 1.9e-37 159.8 173 54.3
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 2.5e-37 159.5 171 49.7
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 4.3e-37 158.7 172 52.3
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 5.6e-37 158.3 167 55.1
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 7.3e-37 157.9 177 53.1
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 2.1e-36 156.4 184 51.6
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 2.8e-36 156.0 171 51.5
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 4.8e-36 155.2 186 51.6
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 4.8e-36 155.2 163 54.6
Ah.09g226220 Amaranthus hybridus HOM05D003776 ORTHO05D004459 2.4e-35 152.9 171 50.3
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 2.4e-35 152.9 170 52.9
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 3.1e-35 152.5 172 53.5
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 5.3e-35 151.8 173 52.6
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 5.3e-35 151.8 171 53.2
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 6.9e-35 151.4 173 49.1
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 9.0e-35 151.0 186 48.4
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 1.2e-34 150.6 171 49.7
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 1.2e-34 150.6 185 51.4
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 2.0e-34 149.8 171 51.5
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 2.0e-34 149.8 174 50.0
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 2.6e-34 149.4 171 49.7
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 2.6e-34 149.4 178 51.1
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 3.4e-34 149.1 173 50.9
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.5e-34 148.7 171 48.5
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 5.8e-34 148.3 186 47.3
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 5.8e-34 148.3 173 50.3
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 7.6e-34 147.9 202 47.5
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 7.6e-34 147.9 171 49.1
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 7.6e-34 147.9 171 52.6
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 7.6e-34 147.9 174 51.7
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 9.9e-34 147.5 167 49.1
Hma1.2p1_2368F.1_g320720 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 9.9e-34 147.5 175 50.9
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 2.2e-33 146.4 171 51.5
Ca_29538_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 2.2e-33 146.4 171 51.5
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 2.2e-33 146.4 171 51.5
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 2.2e-33 146.4 172 50.0
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 6.4e-33 144.8 168 47.6
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 1.9e-32 143.3 171 49.7
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 3.2e-32 142.5 171 51.5
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 4.2e-32 142.1 171 49.7
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 5.4e-32 141.7 171 51.5
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 2.1e-31 139.8 171 49.7
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 3.5e-31 139.0 168 46.4
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 3.5e-31 139.0 171 46.8
Oeu055886.1 Olea europaea HOM05D003776 ORTHO05D004459 4.6e-31 138.7 169 46.7
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 6.0e-31 138.3 171 50.9
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 6.0e-31 138.3 167 47.3
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 1.0e-30 137.5 166 50.0
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.3e-30 137.1 168 50.0
CAN.G816.2 Capsicum annuum HOM05D003776 ORTHO05D004459 1.3e-30 137.1 167 46.7
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 1.8e-30 136.7 171 48.5
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 2.3e-30 136.3 166 50.0
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 3.0e-30 136.0 166 50.0
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 3.0e-30 136.0 167 46.7
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 3.9e-30 135.6 166 50.0
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 3.9e-30 135.6 167 45.5
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 3.9e-30 135.6 169 52.7
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 5.1e-30 135.2 169 52.7
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 5.1e-30 135.2 197 45.7
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 5.1e-30 135.2 167 46.7
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 6.7e-30 134.8 172 45.3
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 6.7e-30 134.8 161 47.8
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 8.7e-30 134.4 169 52.1
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 8.7e-30 134.4 169 52.1
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 8.7e-30 134.4 172 45.3
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 1.5e-29 133.7 181 47.5
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 3.3e-29 132.5 161 48.4
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 7.4e-29 131.3 150 50.7
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 9.6e-29 131.0 166 49.4
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 2.1e-28 129.8 187 43.9
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 1.4e-27 127.1 164 47.6
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 3.1e-27 125.9 164 45.1
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 4.0e-27 125.6 155 45.2
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 1.5e-26 123.6 167 44.3
arahy.Tifrunner.gnm1.ann1.6DBV70 Arachis hypogaea HOM05D003776 ORTHO05D004459 4.5e-26 122.1 155 47.7
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 2.4e-24 116.3 171 41.5
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 9.3e-24 114.4 162 38.3
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 2.5e-21 106.3 147 43.5
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 6.2e-20 101.7 169 38.5
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 1.2e-18 97.4 171 36.8
Cpa.g.sc75.30 Carica papaya HOM05D003776 ORTHO05D004459 7.6e-18 94.7 167 38.3
SEGI_19045 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 8.7e-14 81.3 75 57.3
Actinidia07427 Actinidia chinensis HOM05D003776 ORTHO05D004459 3.3e-13 79.3 89 50.6
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 2.4e-11 73.2 165 35.2
Prupe.1G010000 Prunus persica HOM05D003776 ORTHO05D004459 6.5e-09 65.1 82 45.1
SEGI_02226 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 7.9e-07 58.2 85 37.6
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.9e-06 55.8 85 44.7
RcHm_v2.0_Chr5g0007071 Rosa chinensis HOM05D003776 ORTHO05D004459 5.1e-06 55.5 45 60.0


User provided reference genes

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