Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.3e-193 678.7 333 100.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.5e-64 250.8 321 47.4
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.7e-63 247.3 328 47.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.3e-60 236.9 333 44.1
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 5.0e-60 235.7 328 43.3
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 8.6e-60 235.0 328 42.4
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.9e-59 233.8 329 43.5
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.9e-59 233.8 333 44.1
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.2e-58 231.1 330 43.0
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.2e-58 231.1 333 42.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.2e-58 228.8 327 42.2
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.1e-57 228.0 330 42.4
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.1e-57 228.0 330 42.4
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.3e-57 226.9 330 42.4
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 2.0e-56 223.8 328 41.8
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.9e-55 219.9 299 46.2
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.1e-54 218.0 330 42.1
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.2e-54 216.5 334 42.2
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 5.4e-54 215.7 330 42.1
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.4e-54 215.7 327 41.0
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 7.1e-54 215.3 327 41.3
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 2.1e-53 213.8 332 41.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 7.8e-53 211.8 331 40.8
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 2.3e-52 210.3 332 39.8
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 3.9e-52 209.5 327 39.8
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 5.1e-52 209.1 331 41.4
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 8.6e-52 208.4 327 40.4
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 2.5e-51 206.8 327 40.4
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 3.3e-51 206.5 334 40.7
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 2.8e-50 203.4 331 41.1
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 3.6e-50 203.0 326 41.1
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 3.6e-50 203.0 329 40.7
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.1e-50 201.8 330 41.2
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 1.1e-49 201.4 332 41.3
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 5.2e-49 199.1 327 40.4
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 5.2e-49 199.1 327 37.9
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 5.2e-49 199.1 327 40.1
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 8.9e-49 198.4 331 39.0
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.2e-48 198.0 328 37.8
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 2.0e-48 197.2 330 40.6
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.6e-48 196.8 331 38.1
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 3.4e-48 196.4 334 39.2
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 7.6e-48 195.3 331 38.1
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 4.9e-47 192.6 331 40.2
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 8.3e-47 191.8 328 36.0
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 8.3e-47 191.8 328 38.7
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.4e-46 191.0 342 37.4
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.9e-46 190.7 328 36.3
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 5.4e-46 189.1 327 39.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 7.1e-46 188.7 329 38.6
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 3.5e-45 186.4 329 36.8
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 3.5e-45 186.4 328 36.3
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.0e-44 184.9 329 38.6
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.0e-44 183.3 331 38.1
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.1e-44 182.6 329 36.8
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.1e-43 181.4 335 37.6
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.5e-43 181.0 313 41.9
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.9e-43 180.6 325 36.3
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 3.3e-43 179.9 329 35.6
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 4.3e-43 179.5 316 38.9
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.6e-42 177.6 298 38.6
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.6e-42 177.6 333 35.1
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 4.7e-42 176.0 322 34.5
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 6.2e-42 175.6 331 37.8
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.5e-40 171.0 340 34.4
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 7.6e-40 168.7 330 36.1
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.7e-39 167.5 327 34.9
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 2.2e-39 167.2 328 35.7
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.8e-39 166.4 313 39.9
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 4.9e-39 166.0 331 36.0
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 4.9e-39 166.0 327 35.5
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 5.4e-38 162.5 329 36.2
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 1.2e-37 161.4 326 34.0
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.0e-37 159.1 331 33.5
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.0e-37 159.1 262 38.5
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.0e-36 156.8 327 33.3
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 5.6e-35 152.5 336 36.9
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.1e-33 148.3 331 32.9
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.8e-33 147.5 327 34.6
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 4.0e-33 146.4 330 32.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 9.0e-33 145.2 328 32.6
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 2.0e-32 144.1 327 32.4
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 7.6e-32 142.1 331 33.5
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 7.6e-32 142.1 328 33.8
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 9.9e-32 141.7 330 32.7
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 9.9e-32 141.7 366 30.9
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 6.4e-31 139.0 332 35.2
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.1e-30 138.3 332 34.9
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.9e-30 137.5 330 32.4
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.9e-30 137.5 330 32.4
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.2e-30 136.7 223 39.5
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 3.2e-30 136.7 332 31.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.2e-29 134.8 282 36.2
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 4.6e-29 132.9 298 31.9
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 7.9e-29 132.1 298 35.2
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 3.9e-28 129.8 334 32.6
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 5.3e-25 119.4 359 28.4
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 4.8e-18 96.3 340 25.6
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 2.4e-17 94.0 192 32.3
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 5.3e-17 92.8 155 36.1
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 6.9e-17 92.4 102 52.9
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 2.9e-15 87.0 138 36.2
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 6.0e-13 79.3 387 24.8
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 3.3e-11 73.6 98 43.9
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 8.2e-10 68.9 80 51.2
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 1.8e-09 67.8 173 30.6


User provided reference genes

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