Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.8e-88 329.3 174 100.0
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 2.4e-69 265.8 174 78.2
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 3.4e-68 261.9 174 79.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 4.5e-68 261.5 174 78.7
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 5.9e-68 261.2 174 78.7
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 7.6e-68 260.8 175 80.0
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 7.6e-68 260.8 174 79.3
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.0e-67 260.4 174 77.6
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.2e-67 259.2 174 78.7
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 2.9e-67 258.8 174 78.2
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.9e-67 258.8 174 78.7
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 3.8e-67 258.5 174 78.7
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 3.8e-67 258.5 173 76.9
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-66 256.9 174 78.2
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-66 256.9 174 78.2
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 3.2e-66 255.4 174 77.6
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 4.2e-66 255.0 174 77.6
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.5e-66 254.6 174 77.6
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 5.5e-66 254.6 174 75.9
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 5.5e-66 254.6 177 78.5
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 7.2e-66 254.2 174 78.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.6e-65 253.1 174 77.0
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 3.6e-65 251.9 175 77.7
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 3.6e-65 251.9 174 75.9
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 3.6e-65 251.9 176 78.4
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 4.6e-65 251.5 174 77.6
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.1e-65 251.1 174 75.3
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 6.1e-65 251.1 174 75.3
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 6.1e-65 251.1 174 75.3
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 7.9e-65 250.8 174 77.0
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 1.0e-64 250.4 174 76.4
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 3.0e-64 248.8 174 78.2
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 8.7e-64 247.3 174 75.3
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 8.7e-64 247.3 179 75.4
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.5e-63 246.5 175 75.4
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 1.5e-63 246.5 174 74.1
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.9e-63 246.1 166 78.3
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.9e-63 246.1 174 76.4
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 3.3e-63 245.4 174 74.1
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 4.3e-63 245.0 175 76.6
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 7.4e-63 244.2 175 75.4
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 7.4e-63 244.2 175 74.3
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 9.7e-63 243.8 174 74.1
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 9.7e-63 243.8 174 74.7
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 1.7e-62 243.0 174 73.6
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.2e-62 242.7 174 74.1
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 4.8e-62 241.5 174 73.0
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 4.8e-62 241.5 175 75.4
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 8.2e-62 240.7 174 74.1
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.2e-60 236.9 175 74.9
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 2.0e-60 236.1 174 74.1
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 2.0e-60 236.1 175 73.7
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 4.5e-60 235.0 174 73.6
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 5.9e-60 234.6 174 74.1
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 1.7e-59 233.0 174 73.6
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 2.2e-59 232.6 175 75.4
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 2.9e-59 232.3 184 71.7
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 2.9e-59 232.3 167 76.0
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 6.5e-59 231.1 175 71.4
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 6.5e-59 231.1 175 71.4
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 6.5e-59 231.1 175 71.4
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.4e-58 229.9 175 70.9
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 1.4e-58 229.9 175 71.4
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.4e-58 229.9 174 71.8
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.9e-58 229.6 175 70.9
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.9e-58 229.6 175 70.9
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.9e-58 229.6 175 70.9
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-58 229.2 175 70.3
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 2.5e-58 229.2 175 72.6
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 2.5e-58 229.2 174 73.6
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 3.2e-58 228.8 175 70.3
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 4.2e-58 228.4 174 71.3
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.6e-57 226.5 174 69.0
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 2.1e-57 226.1 175 69.7
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 6.1e-57 224.6 176 67.6
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 7.9e-57 224.2 175 67.4
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.0e-56 223.8 153 77.8
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.8e-56 223.0 174 70.1
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 3.0e-56 222.2 176 70.5
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 3.0e-56 222.2 175 69.1
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 5.1e-56 221.5 175 68.6
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 5.1e-56 221.5 173 67.1
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 6.7e-56 221.1 175 67.4
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.6e-55 219.2 174 66.7
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 3.3e-55 218.8 141 78.0
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 9.7e-55 217.2 167 70.7
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 9.1e-53 210.7 169 71.6
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 5.9e-52 208.0 168 69.0
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 5.9e-52 208.0 151 78.1
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 8.5e-51 204.1 178 60.1
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.5e-50 202.6 173 65.3
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.2e-49 200.3 151 74.2
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.7e-46 189.9 176 60.2
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 4.1e-45 185.3 174 60.9
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 6.5e-43 177.9 154 64.9
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.1e-42 177.2 152 64.5
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 7.2e-42 174.5 137 70.8
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 9.4e-42 174.1 138 72.5
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 3.6e-41 172.2 137 69.3
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 4.4e-39 165.2 124 73.4
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 9.7e-39 164.1 181 51.9
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 1.3e-38 163.7 138 71.0
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 1.8e-37 159.8 152 61.2
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 2.0e-36 156.4 155 60.0
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 3.5e-36 155.6 167 58.7
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 4.4e-31 138.7 115 71.3
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.3e-30 137.1 106 72.6
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 2.8e-30 136.0 112 70.5
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.9e-27 125.9 109 68.8
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.4e-24 117.1 174 41.4
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 3.0e-24 115.9 98 70.4
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 4.1e-21 105.5 165 41.2
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.0e-20 103.2 106 58.5
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 4.3e-18 95.5 80 68.8
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 5.2e-16 88.6 96 59.4
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 3.4e-15 85.9 69 66.7
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 6.4e-14 81.6 122 50.8
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 8.3e-14 81.3 89 59.6
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 7.0e-13 78.2 61 67.2
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-12 77.0 61 67.2
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 3.5e-12 75.9 75 56.0
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 4.6e-12 75.5 82 56.1
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 2.3e-11 73.2 62 66.1
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 3.9e-11 72.4 61 62.3
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 5.0e-11 72.0 61 62.3
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 5.0e-11 72.0 94 54.3
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.5e-10 70.5 61 65.6
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-10 70.5 66 66.7
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 1.8e-08 63.5 108 47.2
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 5.2e-08 62.0 95 49.5
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 9.8e-07 57.8 42 73.8
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 2.2e-06 56.6 138 33.3
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 2.9e-06 56.2 105 43.8
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.7e-06 55.8 51 70.6
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 3.7e-06 55.8 42 71.4


User provided reference genes

Program Settings