Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 0.0e+00 1622.8 885 100.0
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 4.5e-217 758.8 804 52.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 2.3e-216 756.5 914 49.3
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 4.7e-214 748.8 821 51.8
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 4.7e-214 748.8 842 51.4
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 6.8e-213 745.0 846 50.2
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.1e-210 737.6 823 49.7
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 4.1e-210 735.7 896 49.0
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 6.0e-209 731.9 981 45.3
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 3.9e-208 729.2 789 51.3
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 8.6e-208 728.0 852 49.8
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 8.6e-208 728.0 817 49.8
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 1.5e-207 727.2 851 49.1
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.9e-207 726.9 832 49.6
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 1.9e-207 726.9 822 50.2
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 7.3e-207 724.9 841 48.5
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 1.2e-206 724.2 835 49.3
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 6.2e-206 721.8 879 47.1
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 8.0e-206 721.5 825 49.0
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.8e-205 720.3 750 52.9
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 2.3e-205 719.9 907 46.5
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 5.2e-205 718.8 841 48.9
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 6.8e-205 718.4 822 49.3
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 4.4e-204 715.7 840 48.7
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.7e-203 713.8 949 46.0
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 1.7e-203 713.8 855 48.5
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 2.2e-203 713.4 808 50.4
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 3.7e-203 712.6 808 50.7
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.1e-202 711.1 906 46.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 1.9e-202 710.3 830 48.9
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.9e-202 710.3 826 49.0
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 2.4e-202 709.9 910 46.8
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 1.6e-201 707.2 786 50.9
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 2.7e-201 706.4 855 47.5
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.7e-200 703.7 827 49.3
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 2.5e-199 699.9 854 48.2
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 2.5e-199 699.9 914 48.6
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 4.3e-199 699.1 829 48.7
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 5.6e-199 698.7 882 47.2
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 2.1e-198 696.8 878 46.7
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 4.7e-198 695.7 860 49.2
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 2.3e-197 693.3 940 46.0
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 3.1e-197 693.0 828 48.7
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 5.2e-197 692.2 880 47.2
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 6.8e-197 691.8 918 46.2
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.5e-196 690.6 856 46.7
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.5e-196 690.6 911 45.7
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 9.9e-196 688.0 952 44.4
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 9.9e-196 688.0 943 45.4
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 5.4e-194 682.2 969 44.7
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 7.1e-194 681.8 826 48.3
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 9.2e-194 681.4 803 47.6
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 9.2e-194 681.4 868 47.0
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.0e-192 677.9 878 45.9
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 5.1e-192 675.6 850 47.6
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 8.6e-192 674.9 869 45.5
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 1.5e-191 674.1 913 44.6
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.5e-191 673.3 856 46.3
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.1e-189 667.9 902 44.8
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 2.4e-189 666.8 869 46.6
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.1e-189 666.4 856 45.8
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 6.8e-189 665.2 861 45.2
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 8.9e-189 664.8 893 44.7
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.0e-188 663.7 856 46.4
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 1.3e-187 661.0 799 48.1
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 1.3e-187 661.0 877 47.3
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 2.2e-187 660.2 772 49.5
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.9e-187 659.8 857 45.9
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 2.9e-187 659.8 865 46.5
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 3.8e-187 659.4 905 44.9
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 2.4e-186 656.8 906 43.7
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 6.0e-185 652.1 826 46.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 1.3e-184 651.0 814 47.3
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 8.7e-184 648.3 845 46.3
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 1.1e-183 647.9 750 50.0
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.9e-183 647.1 777 48.8
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 1.9e-183 647.1 747 49.4
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.9e-183 647.1 744 50.4
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 5.6e-183 645.6 770 49.1
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 1.6e-182 644.0 785 46.4
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 8.1e-182 641.7 818 46.7
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 4.4e-180 636.0 739 49.3
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.3e-179 634.4 809 46.5
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 7.3e-175 618.6 781 47.6
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.2e-171 607.1 878 42.8
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 3.5e-169 599.7 775 46.8
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 4.6e-169 599.4 810 44.8
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 9.6e-167 591.7 717 48.7
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 3.2e-154 550.1 768 42.4
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 2.7e-153 547.0 696 47.8
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 1.4e-146 524.6 669 46.0
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 2.0e-143 514.2 724 45.0
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.5e-135 488.0 435 59.5
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 7.4e-135 485.7 811 39.1
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 1.0e-128 465.3 590 45.9
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.1e-127 461.8 830 39.5
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 2.8e-126 457.2 452 52.0
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.1e-125 455.3 425 56.0
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 5.0e-115 419.9 564 45.4
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 3.4e-103 380.6 513 46.8
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 1.7e-99 368.2 732 34.0
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 2.2e-94 351.3 424 46.9
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 3.5e-92 344.0 965 30.3
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 5.6e-82 310.1 700 31.7
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 3.6e-81 307.4 221 65.6
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 4.7e-81 307.0 346 55.2
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 6.8e-80 303.1 795 31.2
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 5.8e-71 273.5 553 37.1
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 9.9e-71 272.7 1024 27.0
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 3.1e-56 224.6 323 42.1
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.1e-45 189.5 255 45.9
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 7.4e-42 176.8 131 64.1
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 4.6e-36 157.5 159 55.3
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 9.1e-32 143.3 191 42.9
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 7.7e-31 140.2 247 40.5
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.1e-16 93.2 64 64.1
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 4.5e-15 87.8 55 70.9
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 5.5e-13 80.9 60 63.3
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.6e-12 79.3 133 43.6
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 1.4e-11 76.3 182 34.6
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 3.3e-10 71.6 66 57.6
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 3.3e-10 71.6 66 57.6
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 7.5e-10 70.5 247 24.3
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 5.9e-07 60.8 88 42.0


User provided reference genes

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