Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0172G001 Amborella trichopoda HOM05D000237 ORTHO05D006530 1.2e-67 259.6 126 100.0
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.7e-21 106.3 132 47.0
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 6.6e-21 104.4 133 45.1
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 3.3e-20 102.1 133 45.9
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 2.8e-19 99.0 130 43.8
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 1.8e-18 96.3 136 45.6
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 6.9e-18 94.4 133 47.4
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 9.0e-18 94.0 133 47.4
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.2e-17 93.6 128 43.0
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 1.5e-17 93.2 132 44.7
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.6e-17 92.4 128 43.0
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.6e-17 92.4 131 42.0
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 7.6e-17 90.9 133 44.4
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 1.3e-16 90.1 132 41.7
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.2e-16 89.4 131 42.0
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 2.9e-16 89.0 132 45.5
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 2.9e-16 89.0 133 43.6
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 3.8e-16 88.6 134 43.3
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 3.8e-16 88.6 133 45.1
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 6.4e-16 87.8 135 41.5
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 8.4e-16 87.4 126 42.1
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 8.4e-16 87.4 134 41.8
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 1.4e-15 86.7 130 40.8
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.4e-15 86.7 133 43.6
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.4e-15 86.7 131 44.3
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 2.4e-15 85.9 133 42.1
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.4e-15 85.9 133 43.6
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 3.2e-15 85.5 131 42.0
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 4.2e-15 85.1 132 41.7
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 7.1e-15 84.3 133 42.1
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 7.1e-15 84.3 133 44.4
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 9.3e-15 84.0 130 42.3
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 1.2e-14 83.6 139 43.2
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 1.2e-14 83.6 135 39.3
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.6e-14 83.2 130 42.3
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 2.1e-14 82.8 129 38.8
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 2.7e-14 82.4 126 43.7
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 3.5e-14 82.0 134 41.8
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 3.5e-14 82.0 130 39.2
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 4.6e-14 81.6 125 40.0
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 4.6e-14 81.6 155 39.4
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 4.6e-14 81.6 134 41.0
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 6.0e-14 81.3 134 43.3
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 6.0e-14 81.3 130 41.5
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 7.9e-14 80.9 134 39.6
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 1.0e-13 80.5 155 38.7
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 1.3e-13 80.1 130 38.5
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.7e-13 79.7 130 38.5
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 3.0e-13 79.0 141 36.9
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 3.0e-13 79.0 126 38.9
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 6.6e-13 77.8 126 40.5
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 6.6e-13 77.8 98 43.9
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 6.6e-13 77.8 133 39.1
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 6.6e-13 77.8 98 43.9
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 8.7e-13 77.4 125 39.2
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 1.5e-12 76.6 131 42.7
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 1.5e-12 76.6 101 45.5
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 2.5e-12 75.9 131 37.4
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 2.5e-12 75.9 130 37.7
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 2.5e-12 75.9 126 38.9
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 4.3e-12 75.1 129 38.0
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 4.3e-12 75.1 137 41.6
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 4.3e-12 75.1 126 38.9
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 7.4e-12 74.3 130 36.9
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 7.4e-12 74.3 130 37.7
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 9.6e-12 73.9 128 39.8
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 2.1e-11 72.8 134 38.8
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 2.1e-11 72.8 141 43.3
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 2.8e-11 72.4 128 39.8
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 2.8e-11 72.4 128 39.8
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 2.8e-11 72.4 134 39.6
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 2.8e-11 72.4 139 36.0
SEGI_02602 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 2.8e-11 72.4 145 37.2
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 1.4e-10 70.1 129 39.5
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 1.8e-10 69.7 131 42.7
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 2.4e-10 69.3 131 38.2
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 2.4e-10 69.3 131 38.2
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 2.4e-10 69.3 135 40.0
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 3.1e-10 68.9 131 36.6
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 4.0e-10 68.6 131 38.2
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 5.3e-10 68.2 133 35.3
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 9.0e-10 67.4 95 44.2
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 9.0e-10 67.4 128 38.3
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 1.2e-09 67.0 134 35.8
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 1.2e-09 67.0 128 38.3
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 1.2e-09 67.0 132 36.4
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 2.0e-09 66.2 128 37.5
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 2.0e-09 66.2 128 37.5
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 2.0e-09 66.2 129 38.0
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 2.0e-09 66.2 53 54.7
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 2.6e-09 65.9 128 37.5
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 3.4e-09 65.5 70 45.7
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 4.5e-09 65.1 136 34.6
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 4.5e-09 65.1 60 50.0
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 7.6e-09 64.3 100 37.0
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 7.6e-09 64.3 136 33.8
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 9.9e-09 63.9 130 38.5
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 1.7e-08 63.2 135 36.3
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 2.9e-08 62.4 135 37.0
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 3.8e-08 62.0 131 35.9
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 3.8e-08 62.0 131 35.9
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 3.8e-08 62.0 134 32.8
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 4.9e-08 61.6 133 37.6
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 1.4e-07 60.1 100 35.0
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 1.4e-07 60.1 132 37.9
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 3.2e-07 58.9 129 35.7
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 3.2e-07 58.9 131 34.4
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 3.2e-07 58.9 131 34.4
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 7.1e-07 57.8 126 34.1
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 7.1e-07 57.8 126 34.1
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 2.1e-06 56.2 126 32.5
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 3.5e-06 55.5 136 36.0


User provided reference genes

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