Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 9.6e-192 673.3 338 100.0
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 8.2e-167 590.5 337 86.4
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 9.4e-163 577.0 338 83.1
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.2e-162 576.6 340 85.0
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 3.9e-161 571.6 334 84.4
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.5e-160 569.7 326 85.9
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 1.5e-157 559.7 331 85.5
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.5e-157 559.7 332 82.8
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.9e-156 555.4 323 85.8
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 3.8e-156 555.1 324 83.6
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 3.8e-156 555.1 327 83.5
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 8.5e-156 553.9 331 83.4
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 8.5e-156 553.9 332 82.5
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 1.9e-155 552.7 328 83.8
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 2.5e-155 552.4 333 81.4
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 3.2e-155 552.0 332 82.2
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 5.5e-155 551.2 332 82.2
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 5.5e-155 551.2 332 82.2
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 9.4e-155 550.4 335 80.6
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.1e-154 549.3 332 81.9
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.1e-154 549.3 325 83.7
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 4.7e-154 548.1 328 83.2
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 6.1e-154 547.7 325 83.1
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.4e-153 546.6 322 85.1
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.8e-153 546.2 340 81.5
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.9e-153 545.0 325 83.1
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 8.8e-153 543.9 320 83.8
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 8.8e-153 543.9 325 81.8
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 1.5e-152 543.1 322 84.5
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 4.4e-152 541.6 324 83.0
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.7e-151 538.5 323 83.3
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 3.7e-151 538.5 327 82.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.8e-150 536.2 324 79.3
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 4.1e-150 535.0 332 78.6
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 4.1e-150 535.0 344 77.3
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.2e-149 533.5 328 79.0
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.6e-149 532.3 329 78.7
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 4.5e-149 531.6 333 79.6
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 5.9e-149 531.2 331 79.2
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 7.7e-149 530.8 322 81.4
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.0e-148 530.4 337 80.1
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 1.7e-148 529.6 335 78.5
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 3.8e-148 528.5 339 79.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 5.0e-148 528.1 322 81.4
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.0e-148 528.1 325 79.7
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.1e-147 526.9 333 78.1
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.9e-147 526.2 330 80.6
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.9e-147 526.2 320 80.0
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.9e-147 526.2 333 77.5
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.9e-147 526.2 325 79.1
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 2.5e-147 525.8 331 78.2
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 7.2e-147 524.2 328 77.7
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 9.4e-147 523.9 323 79.9
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.2e-146 523.5 334 77.2
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.1e-146 522.7 335 77.0
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 2.1e-146 522.7 323 80.8
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 3.6e-146 521.9 323 78.6
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 6.1e-146 521.2 334 78.1
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 8.0e-146 520.8 331 78.2
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 1.4e-145 520.0 323 80.8
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.4e-145 520.0 329 76.9
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.8e-145 519.6 350 74.6
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.3e-145 519.2 331 77.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 3.0e-145 518.8 321 79.4
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 4.0e-145 518.5 326 78.2
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 1.2e-144 516.9 332 74.1
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 1.5e-144 516.5 321 78.5
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.5e-144 516.5 304 84.9
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.3e-144 515.4 333 76.9
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 5.7e-144 514.6 333 76.9
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 7.5e-144 514.2 303 84.2
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 7.5e-144 514.2 327 77.7
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 3.7e-143 511.9 325 78.8
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 4.8e-143 511.5 328 75.0
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 6.3e-143 511.1 322 78.0
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 1.4e-142 510.0 322 77.3
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 1.8e-142 509.6 328 75.6
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 4.1e-142 508.4 331 75.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 5.3e-142 508.1 304 82.9
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 5.3e-142 508.1 327 77.4
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.6e-141 506.5 356 71.6
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 3.5e-141 505.4 328 73.8
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 4.5e-141 505.0 334 74.6
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 8.5e-140 500.7 326 74.5
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.9e-139 499.6 328 74.7
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 5.5e-139 498.0 310 79.7
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 2.1e-138 496.1 336 74.1
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.7e-138 495.7 305 80.3
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 4.7e-138 495.0 381 66.9
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 4.7e-138 495.0 336 72.6
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 1.4e-137 493.4 336 73.2
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.0e-137 492.3 336 73.5
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 8.8e-137 490.7 337 71.2
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 7.5e-136 487.6 326 71.8
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 7.5e-136 487.6 375 68.8
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 2.2e-135 486.1 330 73.9
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 2.8e-135 485.7 319 74.0
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 3.7e-135 485.3 341 73.6
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.7e-135 485.3 308 77.9
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 4.8e-135 485.0 324 72.8
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 4.8e-135 485.0 304 78.0
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 8.3e-135 484.2 323 72.4
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 8.3e-135 484.2 325 75.7
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 1.1e-134 483.8 322 72.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 2.4e-134 482.6 322 72.4
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 3.1e-134 482.3 319 73.0
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 5.4e-134 481.5 311 77.5
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 9.1e-134 480.7 322 72.4
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.2e-133 480.3 323 72.1
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 2.7e-133 479.2 323 72.1
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 4.5e-133 478.4 323 72.1
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 5.9e-133 478.0 323 72.1
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 5.9e-133 478.0 322 71.7
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 3.8e-132 475.3 265 87.9
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 1.5e-131 473.4 355 67.0
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.9e-131 473.0 317 75.4
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 1.2e-130 470.3 355 67.3
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.0e-129 467.2 306 78.1
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.8e-129 466.5 311 74.6
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 2.3e-129 466.1 322 72.4
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 2.0e-128 463.0 336 69.0
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 4.9e-127 458.4 323 72.8
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.3e-124 450.3 327 68.8
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 2.3e-124 449.5 320 68.1
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.9e-123 446.4 302 71.9
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 1.4e-121 440.3 529 47.8
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 5.7e-120 434.9 265 82.3
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 8.3e-119 431.0 326 67.8
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 9.2e-118 427.6 253 85.0
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 3.6e-114 415.6 264 79.5
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 3.9e-108 395.6 323 63.5
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 6.0e-101 371.7 232 78.9
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.0e-100 370.9 324 57.7
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 6.2e-98 361.7 314 57.0
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.2e-96 357.5 287 65.9
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 3.5e-93 345.9 206 81.6
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 1.3e-92 344.0 290 59.0
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.6e-90 337.0 207 75.8
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 4.7e-90 335.5 204 79.4
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 2.0e-88 330.1 351 54.1
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 2.6e-88 329.7 210 79.0
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.8e-81 307.0 206 74.8
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 1.1e-75 287.7 160 88.1
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.8e-71 272.7 163 82.2
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 2.7e-69 266.5 375 41.3
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.0e-63 248.1 167 72.5
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.2e-62 243.0 162 72.2
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 7.1e-62 241.9 168 73.8
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 3.5e-61 239.6 213 59.2
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 3.3e-59 233.0 161 70.2
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 2.5e-54 216.9 251 49.0
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 5.7e-51 205.7 340 40.0
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 1.1e-49 201.4 126 78.6
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 5.3e-49 199.1 193 56.0
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 3.7e-42 176.4 112 79.5
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.3e-31 141.4 138 55.1
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 3.6e-29 133.3 251 34.7
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.2e-27 128.3 254 36.2
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 1.5e-27 127.9 71 88.7
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 4.8e-26 122.9 341 31.4
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.3e-23 114.8 206 37.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 4.2e-22 109.8 63 79.4
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 1.6e-21 107.8 64 78.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 7.5e-19 99.0 57 82.5
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 2.8e-18 97.1 88 53.4
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.4e-17 94.7 60 80.0
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 5.4e-09 66.2 52 53.8
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.5e-08 63.2 49 61.2
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 1.1e-06 58.5 35 74.3


User provided reference genes

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