Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 2.7e-76 288.5 139 100.0
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 2.6e-42 175.6 109 69.7
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 5.8e-42 174.5 119 67.2
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.3e-41 173.3 109 69.7
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 3.7e-41 171.8 109 67.9
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 4.9e-41 171.4 113 66.4
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 6.4e-41 171.0 109 68.8
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 8.3e-41 170.6 108 70.4
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 1.1e-40 170.2 109 67.9
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 1.1e-40 170.2 109 67.9
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 1.4e-40 169.9 113 66.4
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 2.4e-40 169.1 109 69.7
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 2.4e-40 169.1 109 66.1
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 4.1e-40 168.3 109 68.8
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 5.4e-40 167.9 122 64.8
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 5.4e-40 167.9 109 65.1
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 7.0e-40 167.5 109 70.6
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 9.2e-40 167.2 108 70.4
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 9.2e-40 167.2 109 69.7
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 1.2e-39 166.8 115 64.3
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 1.6e-39 166.4 109 69.7
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.6e-39 166.4 135 60.0
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.7e-39 165.6 114 64.0
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 3.5e-39 165.2 109 68.8
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 4.6e-39 164.9 109 70.6
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.6e-39 164.9 134 63.4
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.6e-39 164.9 106 70.8
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 7.8e-39 164.1 115 61.7
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.0e-38 163.7 112 66.1
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 1.7e-38 162.9 110 66.4
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 1.7e-38 162.9 113 67.3
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.7e-38 162.9 108 68.5
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 2.3e-38 162.5 140 60.7
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 2.3e-38 162.5 113 64.6
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 2.3e-38 162.5 106 68.9
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 3.0e-38 162.2 120 60.0
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 3.0e-38 162.2 113 64.6
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 3.0e-38 162.2 143 55.2
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.9e-38 161.8 108 67.6
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 5.0e-38 161.4 114 64.9
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 6.6e-38 161.0 113 65.5
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 6.6e-38 161.0 113 65.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 6.6e-38 161.0 113 65.5
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 6.6e-38 161.0 114 62.3
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 6.6e-38 161.0 112 67.0
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 8.6e-38 160.6 115 61.7
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 8.6e-38 160.6 108 67.6
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 1.9e-37 159.5 108 63.9
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.5e-37 159.1 108 65.7
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 2.5e-37 159.1 111 65.8
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 2.5e-37 159.1 131 59.5
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 4.3e-37 158.3 114 63.2
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 4.3e-37 158.3 114 64.0
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 5.6e-37 157.9 115 63.5
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.6e-37 157.9 115 63.5
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.6e-37 157.9 115 63.5
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 7.3e-37 157.5 112 63.4
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 7.3e-37 157.5 116 61.2
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 9.5e-37 157.1 136 53.7
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 1.2e-36 156.8 101 68.3
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 2.1e-36 156.0 109 64.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 3.6e-36 155.2 114 64.9
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 3.6e-36 155.2 128 59.4
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 4.7e-36 154.8 106 64.2
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 8.1e-36 154.1 108 63.9
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.8e-35 152.9 108 62.0
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 1.8e-35 152.9 114 65.8
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 3.1e-35 152.1 112 59.8
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 3.1e-35 152.1 114 63.2
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 4.0e-35 151.8 111 62.2
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 6.8e-35 151.0 112 61.6
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 6.8e-35 151.0 111 62.2
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 6.8e-35 151.0 108 62.0
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 6.8e-35 151.0 112 61.6
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 8.9e-35 150.6 112 61.6
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 8.9e-35 150.6 112 60.7
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 1.2e-34 150.2 112 61.6
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.2e-34 150.2 112 61.6
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 1.2e-34 150.2 112 61.6
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.2e-34 150.2 111 62.2
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 1.2e-34 150.2 133 56.4
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.5e-34 149.8 112 60.7
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.5e-34 149.8 111 60.4
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 2.6e-34 149.1 104 63.5
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 2.6e-34 149.1 112 59.8
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 2.6e-34 149.1 106 63.2
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 2.6e-34 149.1 114 61.4
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 3.4e-34 148.7 112 59.8
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 4.4e-34 148.3 110 61.8
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 9.8e-34 147.1 114 61.4
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 9.8e-34 147.1 137 53.3
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 3.7e-33 145.2 111 61.3
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 1.1e-32 143.7 109 60.6
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 1.2e-31 140.2 124 53.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 1.6e-31 139.8 133 53.4
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 1.6e-31 139.8 151 47.0
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 2.1e-31 139.4 130 53.8
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.3e-30 136.7 102 62.7
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 5.1e-30 134.8 134 48.5
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.9e-29 132.9 114 56.1
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 7.3e-29 131.0 114 57.0
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.6e-28 129.8 169 41.4
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 2.3e-27 125.9 95 61.1
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.3e-27 125.9 95 62.1
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 2.6e-26 122.5 129 48.8
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 8.4e-25 117.5 94 57.4
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 5.1e-22 108.2 118 46.6
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 5.4e-16 88.2 65 60.0
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 3.5e-15 85.5 103 42.7
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 7.8e-15 84.3 88 47.7
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.9e-14 82.0 80 52.5
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 6.6e-14 81.3 52 67.3
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.5e-13 79.3 51 72.5
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 5.6e-13 78.2 51 68.6
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 7.3e-13 77.8 61 59.0
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 2.8e-12 75.9 48 68.8
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 2.8e-12 75.9 51 70.6
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 2.0e-10 69.7 49 65.3
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 7.6e-10 67.8 44 68.2
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 2.2e-09 66.2 48 64.6
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 1.9e-08 63.2 119 37.0
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 7.9e-07 57.8 77 42.9


User provided reference genes

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