Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0099G044 Amborella trichopoda HOM05D000225 ORTHO05D064677 2.6e-65 251.9 129 100.0
ATR0815G012 Amborella trichopoda HOM05D000225 ORTHO05D063220 2.5e-39 165.6 96 86.5
ATR0605G283 Amborella trichopoda HOM05D000225 ORTHO05D001817 1.9e-23 112.8 66 87.9
ATR0605G224 Amborella trichopoda HOM05D000225 ORTHO05D001817 7.3e-23 110.9 66 86.4
Nn8g39904 Nelumbo nucifera HOM05D000225 ORTHO05D001817 2.7e-09 65.9 61 52.5
Aa31LG9G13510 Aethionema arabicum HOM05D000225 ORTHO05D001817 4.6e-09 65.1 53 54.7
Nn6g31551 Nelumbo nucifera HOM05D000225 ORTHO05D001817 4.6e-09 65.1 59 54.2
MBI04_g23898_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D001817 1.0e-08 63.9 61 49.2
Psat2g024920 Pisum sativum HOM05D000225 ORTHO05D001817 1.3e-08 63.5 55 56.4
Sp4g15920 Schrenkiella parvula HOM05D000225 ORTHO05D001817 1.3e-08 63.5 67 46.3
AT2G33580 Arabidopsis thaliana HOM05D000225 ORTHO05D001817 1.7e-08 63.2 67 47.8
Psat2g024880 Pisum sativum HOM05D000225 ORTHO05D001817 1.7e-08 63.2 63 50.8
Medtr5g085790 Medicago truncatula HOM05D000225 ORTHO05D001817 3.0e-08 62.4 55 52.7
TAR376G1026 Trochodendron aralioides HOM05D000225 ORTHO05D001817 3.9e-08 62.0 60 46.7
CiPaw.08G079100 Carya illinoinensis HOM05D000225 ORTHO05D001817 5.0e-08 61.6 70 44.3
Gohir.A11G222300 Gossypium hirsutum HOM05D000225 ORTHO05D001817 6.6e-08 61.2 58 48.3
DCAR_013354 Daucus carota HOM05D000225 ORTHO05D001817 8.6e-08 60.8 60 50.0
Phvul.008G212500 Phaseolus vulgaris HOM05D000225 ORTHO05D001817 8.6e-08 60.8 61 47.5
Ca_06103_v3 Cicer arietinum L. HOM05D000225 ORTHO05D001817 1.1e-07 60.5 63 52.4
Potri.005G259600 Populus trichocarpa HOM05D000225 ORTHO05D001817 1.1e-07 60.5 55 50.9
ATR0665G455 Amborella trichopoda HOM05D000282 ORTHO05D038289 1.5e-07 60.1 31 87.1
BcaB06g28699 Brassica carinata HOM05D000225 ORTHO05D001817 1.5e-07 60.1 70 40.0
VMungo0647G0457 Vigna mungo HOM05D000225 ORTHO05D001817 1.5e-07 60.1 51 54.9
Glyma.02G269600 Glycine max HOM05D000225 ORTHO05D001817 1.9e-07 59.7 68 44.1
Oeu013499.1 Olea europaea HOM05D000225 ORTHO05D001817 1.9e-07 59.7 73 42.5
AL4G29250 Arabidopsis lyrata HOM05D000225 ORTHO05D001817 2.5e-07 59.3 53 50.9
BcaC02g07803 Brassica carinata HOM05D000225 ORTHO05D001817 2.5e-07 59.3 61 44.3
A04p25840 Brassica napus HOM05D000225 ORTHO05D001817 2.5e-07 59.3 61 44.3
C04p63080 Brassica napus HOM05D000225 ORTHO05D001817 2.5e-07 59.3 61 44.3
BolC4t27783H Brassica oleracea HOM05D000225 ORTHO05D001817 2.5e-07 59.3 61 44.3
BraA04t18086Z Brassica rapa HOM05D000225 ORTHO05D001817 2.5e-07 59.3 61 44.3
Gohir.D11G235800 Gossypium hirsutum HOM05D000225 ORTHO05D001817 2.5e-07 59.3 58 48.3
Gorai.007G248700 Gossypium raimondii HOM05D000225 ORTHO05D001817 2.5e-07 59.3 58 48.3
TWI36G0343 Tripterygium wilfordii HOM05D000225 ORTHO05D001817 3.3e-07 58.9 53 52.8
CSS0049119 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D001817 4.3e-07 58.5 54 50.0
Haze_22889 Corylus avellana HOM05D000225 ORTHO05D001817 4.3e-07 58.5 57 47.4
Thhalv10016366m.g Eutrema salsugineum HOM05D000225 ORTHO05D001817 4.3e-07 58.5 66 42.4
Cpa.g.sc36.97 Carica papaya HOM05D000225 ORTHO05D001817 5.6e-07 58.2 61 49.2
Duzib177G0435 Durio zibethinus HOM05D000225 ORTHO05D001817 5.6e-07 58.2 58 46.6
Sabra05G0200900 Salix brachista HOM05D000225 ORTHO05D001817 5.6e-07 58.2 55 49.1
TPR.G19309 Trifolium pratense HOM05D000225 ORTHO05D001817 5.6e-07 58.2 67 50.7
FvH4_5g26740 Fragaria vesca HOM05D000225 ORTHO05D001817 9.5e-07 57.4 57 43.9
Oeu000740.1 Olea europaea HOM05D000225 ORTHO05D001817 9.5e-07 57.4 73 42.5
CARHR127600 Cardamine hirsuta HOM05D000225 ORTHO05D001817 1.2e-06 57.0 64 45.3
Cfa014167 Carpinus fangiana HOM05D000225 ORTHO05D001817 1.2e-06 57.0 57 47.4
PSO541G2288 Papaver somniferum HOM05D000225 ORTHO05D001817 1.2e-06 57.0 53 54.7
CANSAT25G2144 Cannabis sativa HOM05D000225 ORTHO05D001817 1.6e-06 56.6 59 44.1
Hma1.2p1_0914F.1_g236220 Hydrangea macrophylla HOM05D000225 ORTHO05D001817 1.6e-06 56.6 57 45.6
ATR0733G244 Amborella trichopoda HOM05D000225 ORTHO05D001817 2.1e-06 56.2 57 45.6
COL.COLO4_08542 Corchorus olitorius HOM05D000560 ORTHO05D000417 2.1e-06 56.2 51 51.0
FAN18G4396 Fragaria x ananassa HOM05D000225 ORTHO05D001817 2.1e-06 56.2 55 45.5
Thecc.05G232000 Theobroma cacao HOM05D000225 ORTHO05D001817 2.1e-06 56.2 51 49.0
FAN08G1057 Fragaria x ananassa HOM05D000225 ORTHO05D001817 2.8e-06 55.8 57 43.9
LjContig00564g0021624 Lotus japonicus HOM05D000225 ORTHO05D001817 2.8e-06 55.8 53 49.1
QL02p016309 Quercus lobata HOM05D000225 ORTHO05D001817 2.8e-06 55.8 61 44.3
Aqoxy1G01743 Aquilegia oxysepala HOM05D000225 ORTHO05D001817 3.6e-06 55.5 79 39.2
TPR.G34500 Trifolium pratense HOM05D000225 ORTHO05D001817 3.6e-06 55.5 53 49.1
FAN13G2775 Fragaria x ananassa HOM05D000225 ORTHO05D001817 4.7e-06 55.1 57 43.9
Ciclev10000515m.g Citrus clementina HOM05D000225 ORTHO05D001817 6.2e-06 54.7 51 51.0
RcHm_v2.0_Chr7g0217601 Rosa chinensis HOM05D000225 ORTHO05D001817 6.2e-06 54.7 57 42.1
TAR374G1023 Trochodendron aralioides HOM05D000225 ORTHO05D001817 6.2e-06 54.7 60 41.7
GSVIVG01013461001 Vitis vinifera HOM05D000225 ORTHO05D001817 6.2e-06 54.7 58 43.1
Eucgr.F03625 Eucalyptus grandis HOM05D000225 ORTHO05D001817 8.1e-06 54.3 58 43.1
Prupe.5G001000 Prunus persica HOM05D000225 ORTHO05D001817 8.1e-06 54.3 54 44.4


User provided reference genes

Program Settings