Gene: AT2G33580
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G33580
- Transcript Identifier AT2G33580.1
- Gene Type Coding gene
- Location Chr2 : 14219848-14221842 : negative
Gene Family Information
- ID HOM05D000225
- #Genes/#Species 1826/96
- Phylogenetic origin
- ID ORTHO05D001817
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G33580.1
- symbol LYK5
- Alias AtLYK5
- full_name LysM-containing receptor-like kinase 5
- uniprot O22808
Descriptions
- Description Protein kinase superfamily protein
- Computational description Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT2G23770.1); Has 102109 Blast hits to 101070 proteins in 4036 species: Archae - 73; Bacteria - 10993; Metazoa - 38718; Fungi - 7726; Plants - 30221; Viruses - 349; Other Eukaryotes - 14029 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006468 | IEA | Gene Ontology | protein phosphorylation | |
| GO:0006468 | IEA | InterPro | protein phosphorylation | |
| GO:0045087 | IMP | Gene Ontology | innate immune response | 1 |
| GO:0071323 | IEP | Gene Ontology | cellular response to chitin | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004672 | IEA | Gene Ontology | protein kinase activity | |
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0042803 | IPI | Gene Ontology | protein homodimerization activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0008061 | IDA | Gene Ontology | chitin binding | 2 |
| GO:0016301 | ISS | Gene Ontology | kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | IDA IEA | GOA Database | plasma membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005576 | ISM | Gene Ontology | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |