Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 3092.8 1848 100.0
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1358.2 1455 57.7
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1340.1 1393 57.4
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1320.1 1390 59.4
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1298.1 1438 57.4
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1286.2 1393 58.5
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1260.7 1390 57.7
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1256.5 1421 57.6
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1251.9 1475 53.9
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1250.7 1404 53.6
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1239.2 1489 54.6
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1237.2 1484 51.3
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1236.9 1504 54.5
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1233.4 1493 54.4
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1232.6 1374 57.0
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1230.7 1469 55.6
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1226.8 1413 56.6
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1209.1 1493 53.7
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1203.7 1387 56.4
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1200.7 1468 54.1
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1196.4 1455 52.7
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1196.4 1461 52.7
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1192.2 1451 52.8
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1183.3 1479 54.0
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1182.5 1374 55.7
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1181.0 1480 53.6
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1173.3 1430 54.6
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1172.9 1505 53.5
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1171.8 1464 54.0
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1168.7 1376 55.6
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1167.1 1469 52.3
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1164.8 1380 53.8
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1164.4 1481 53.4
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1164.4 1481 53.3
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1164.1 1380 53.9
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1163.7 1481 53.3
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1162.5 1459 54.3
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1161.0 1365 56.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1161.0 1442 53.2
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1159.4 1481 53.3
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1158.3 1382 54.4
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1158.3 1528 51.1
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1154.4 1411 54.6
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1154.0 1475 53.1
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1152.5 1488 53.4
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1151.3 1511 51.8
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1149.4 1434 53.6
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1148.3 1499 51.4
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1144.0 1372 54.0
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1140.6 1467 52.0
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1134.0 1366 54.5
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1130.9 1463 52.5
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1124.0 1492 47.7
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1122.8 1376 53.0
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1120.1 1467 51.6
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1119.0 1454 52.5
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1114.8 1470 49.3
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1112.4 1420 51.8
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1107.0 1459 50.4
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1091.6 1459 49.2
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 0.0e+00 1084.3 1356 53.5
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1078.2 1209 57.3
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 1.3e-311 1074.7 1204 56.9
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 2.2e-306 1056.6 1265 56.0
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 1.9e-302 1043.5 1187 54.5
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 2.4e-297 1026.5 1276 54.2
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 7.9e-296 1021.5 1332 53.1
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 6.2e-293 1011.9 1496 45.4
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 5.6e-286 988.8 1279 52.2
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 2.4e-284 983.4 1279 52.9
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 1.1e-278 964.5 1262 52.4
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 6.5e-274 948.7 1276 49.9
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 1.1e-273 948.0 967 56.0
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 1.3e-271 941.0 1209 52.9
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 4.1e-268 929.5 1163 55.2
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.2e-255 885.9 969 56.7
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 3.4e-238 830.1 1656 40.5
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 1.7e-237 827.8 948 57.7
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 4.9e-229 799.7 1058 53.0
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 1.1e-228 798.5 1268 47.3
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 1.7e-221 774.6 839 54.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.7e-213 748.0 1152 44.9
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.3e-210 738.4 1140 46.9
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 2.3e-162 578.2 702 58.3
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 5.7e-161 573.5 880 44.0
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.3e-136 492.7 542 58.1
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 9.1e-127 459.9 544 52.9
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.9e-116 425.6 1253 31.4
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 1.5e-92 346.3 443 49.4
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.2e-83 316.6 427 48.7
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 3.1e-66 258.8 261 52.1
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 7.1e-63 247.7 236 55.5
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.9e-56 225.7 308 47.4
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 9.6e-52 210.7 228 50.0
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 6.2e-51 208.0 212 50.9
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 9.7e-44 184.1 344 43.3
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.4e-39 170.2 176 53.4
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 5.1e-37 161.8 259 40.5
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 1.4e-34 153.7 153 56.9
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 5.3e-34 151.8 119 68.1
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 3.4e-33 149.1 159 54.7
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.2e-32 146.4 165 47.9
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 7.0e-26 124.8 1379 21.5
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 3.5e-25 122.5 228 36.4
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-24 119.4 104 62.5
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 9.4e-23 114.4 117 48.7
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 8.2e-19 101.3 153 41.8
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.1e-18 100.9 111 55.9
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 1.0e-16 94.4 278 27.0
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 5.0e-16 92.0 300 30.0
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 8.5e-16 91.3 171 37.4
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-14 86.7 71 52.1
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 1.0e-13 84.3 57 70.2
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 2.6e-12 79.7 59 66.1
ATR0030G060 Amborella trichopoda HOM05D001674 ORTHO05D008599 4.1e-10 72.4 67 61.2


User provided reference genes

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