Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 2.9e-137 491.9 251 100.0
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 5.1e-81 305.1 182 79.1
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.9e-80 303.1 183 78.1
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 2.1e-79 299.7 185 76.2
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 2.8e-79 299.3 183 79.2
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 2.8e-79 299.3 183 77.0
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 4.8e-79 298.5 183 77.6
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 1.1e-78 297.4 187 76.5
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 4.0e-78 295.4 182 77.5
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 5.3e-78 295.0 183 77.0
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 6.9e-78 294.7 188 76.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.2e-77 293.9 183 74.3
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.5e-77 293.5 187 76.5
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 2.0e-77 293.1 182 76.9
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 2.6e-77 292.7 189 74.1
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 2.6e-77 292.7 182 75.8
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 4.5e-77 292.0 188 73.4
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 7.6e-77 291.2 178 75.3
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 2.2e-76 289.7 187 72.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 2.9e-76 289.3 183 74.3
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 4.9e-76 288.5 183 74.3
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 6.5e-76 288.1 183 75.4
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 8.4e-76 287.7 187 73.8
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 8.4e-76 287.7 187 73.8
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 8.4e-76 287.7 187 73.8
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 1.4e-75 287.0 182 75.3
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 1.4e-75 287.0 193 68.9
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.9e-75 286.6 177 76.3
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.9e-75 286.6 183 73.8
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 3.2e-75 285.8 183 73.8
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 3.2e-75 285.8 188 73.4
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 4.2e-75 285.4 183 72.1
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 7.1e-75 284.6 182 73.1
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 7.1e-75 284.6 182 74.2
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 9.3e-75 284.3 182 75.3
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 1.2e-74 283.9 182 73.6
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.6e-74 283.5 182 73.1
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 2.1e-74 283.1 183 72.1
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 4.6e-74 282.0 183 72.7
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 4.6e-74 282.0 183 73.8
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 6.0e-74 281.6 183 72.7
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 6.0e-74 281.6 185 74.1
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 6.0e-74 281.6 183 73.2
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 6.0e-74 281.6 185 72.4
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 6.0e-74 281.6 185 72.4
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 7.9e-74 281.2 183 72.1
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 7.9e-74 281.2 183 72.1
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 7.9e-74 281.2 183 72.1
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 1.0e-73 280.8 183 71.0
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 1.0e-73 280.8 183 72.7
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 1.3e-73 280.4 182 72.0
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 3.9e-73 278.9 183 70.5
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 6.7e-73 278.1 178 73.6
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 6.7e-73 278.1 178 73.6
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.5e-72 276.9 183 69.9
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 3.3e-72 275.8 183 71.0
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 4.3e-72 275.4 183 69.9
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.4e-72 274.6 181 70.7
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 9.6e-72 274.2 182 72.5
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.6e-71 273.5 182 72.5
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 2.1e-71 273.1 177 72.9
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.7e-71 272.3 182 72.0
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 3.7e-71 272.3 183 68.9
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 4.8e-71 271.9 188 69.1
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 4.8e-71 271.9 183 69.9
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 4.8e-71 271.9 172 72.1
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 6.2e-71 271.6 183 68.9
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 6.2e-71 271.6 174 74.7
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.4e-70 270.4 158 80.4
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 1.4e-70 270.4 183 69.4
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.4e-70 270.4 181 69.1
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 5.3e-70 268.5 182 69.2
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 5.3e-70 268.5 183 69.4
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 5.3e-70 268.5 187 67.9
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 5.3e-70 268.5 182 70.9
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 6.9e-70 268.1 182 70.9
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 9.0e-70 267.7 186 68.8
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.5e-69 266.9 190 67.9
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.6e-69 266.2 184 67.4
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 2.6e-69 266.2 183 68.3
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 2.6e-69 266.2 192 66.1
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 5.8e-69 265.0 183 69.9
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 3.8e-68 262.3 183 66.7
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 6.5e-68 261.5 183 66.7
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 1.1e-67 260.8 183 67.8
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 4.2e-67 258.8 183 67.8
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 9.3e-67 257.7 183 67.2
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 9.3e-67 257.7 183 66.1
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 6.1e-66 255.0 183 65.6
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 8.7e-65 251.1 167 69.5
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 5.3e-62 241.9 172 66.9
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 2.6e-61 239.6 145 75.9
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.4e-59 233.8 181 61.9
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.4e-59 233.8 181 61.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 5.5e-59 231.9 183 62.8
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 3.6e-58 229.2 177 63.8
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 6.1e-58 228.4 190 63.2
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 5.1e-57 225.3 144 72.2
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 4.8e-55 218.8 180 61.1
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 4.1e-54 215.7 188 60.1
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 4.1e-54 215.7 182 61.5
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.0e-52 211.1 174 58.6
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.7e-47 193.7 137 68.6
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 4.8e-47 192.2 130 72.3
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 2.1e-42 176.8 231 44.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 3.6e-26 122.9 179 40.2
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.2e-24 117.9 76 72.4
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 4.4e-24 115.9 168 38.1
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 5.2e-17 92.4 77 55.8
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.5e-11 74.3 56 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 2.1e-10 70.5 96 40.6


User provided reference genes

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