Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.5e-141 506.1 257 100.0
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.5e-141 506.1 257 100.0
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 1.0e-140 503.4 257 99.2
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 4.8e-135 484.6 246 99.6
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 2.0e-133 479.2 251 97.2
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 1.3e-132 476.5 243 99.6
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 1.3e-132 476.5 243 99.6
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 1.3e-132 476.5 243 99.6
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 1.1e-131 473.4 243 99.2
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 4.1e-126 454.9 243 95.5
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 3.8e-124 448.4 243 94.2
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 1.5e-123 446.4 243 94.2
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 9.4e-123 443.7 243 93.4
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 2.3e-121 439.1 240 93.8
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 3.0e-121 438.7 243 92.6
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 6.7e-121 437.6 243 93.8
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-120 436.8 240 93.3
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-120 436.8 240 93.3
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-120 436.8 240 93.3
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 1.5e-120 436.4 243 91.8
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 1.5e-120 436.4 243 91.8
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 9.7e-120 433.7 232 94.8
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 6.3e-119 431.0 242 91.3
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 3.1e-118 428.7 239 91.2
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 3.1e-118 428.7 239 91.2
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 3.1e-118 428.7 252 88.9
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 9.1e-118 427.2 242 90.1
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.0e-116 421.4 243 89.3
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 5.0e-116 421.4 243 89.3
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 3.2e-115 418.7 235 90.2
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 4.7e-114 414.8 243 88.9
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 4.0e-113 411.8 228 92.5
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 6.8e-113 411.0 242 88.0
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 1.2e-112 410.2 232 91.8
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.4e-110 403.3 232 88.4
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.8e-110 402.9 215 94.0
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.8e-110 402.9 215 94.0
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 4.1e-110 401.7 203 99.5
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 1.6e-109 399.8 228 91.2
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 4.5e-109 398.3 212 95.3
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 6.5e-108 394.4 212 94.3
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 8.0e-106 387.5 229 88.2
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 8.0e-106 387.5 212 92.9
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 4.0e-105 385.2 192 100.0
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 1.6e-101 373.2 210 89.0
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 3.5e-101 372.1 200 93.5
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 2.9e-100 369.0 213 87.8
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 1.9e-99 366.3 192 97.4
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 7.5e-96 354.4 206 86.4
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 2.4e-94 349.4 185 94.1
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 3.2e-94 349.0 209 86.1
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 5.4e-94 348.2 198 89.4
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 1.6e-93 346.7 230 80.0
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-92 343.6 201 85.6
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 2.8e-90 335.9 243 75.3
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 7.5e-88 327.8 170 95.3
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.7e-87 325.5 203 82.3
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 3.9e-84 315.5 173 93.1
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 6.6e-84 314.7 209 78.9
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 8.6e-84 314.3 178 87.1
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 8.1e-82 307.8 168 92.3
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.4e-80 302.0 209 78.5
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 9.8e-80 300.8 189 84.7
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.6e-77 293.5 210 76.7
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 8.9e-73 277.7 148 92.6
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 5.1e-68 261.9 133 96.2
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 3.3e-67 259.2 212 67.5
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 3.9e-60 235.7 139 85.6
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.8e-58 229.6 129 89.1
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 8.1e-58 228.0 129 90.7
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 5.3e-57 225.3 112 96.4
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 8.4e-55 218.0 124 90.3
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 6.9e-49 198.4 144 73.6
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 1.3e-47 194.1 118 81.4
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 3.8e-47 192.6 108 89.8
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 9.3e-46 188.0 99 99.0
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 2.3e-44 183.3 107 86.9
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 3.0e-44 183.0 108 85.2
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.1e-42 176.8 98 88.8
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 8.2e-42 174.9 88 95.5
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 9.0e-41 171.4 105 85.7
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 2.2e-39 166.8 168 60.1
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 2.7e-37 159.8 110 75.5
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.8e-36 157.1 96 87.5
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 2.3e-36 156.8 101 82.2
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 2.8e-34 149.8 73 97.3
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 6.3e-34 148.7 77 90.9
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 2.4e-33 146.7 75 93.3
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.1e-30 137.9 69 92.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.4e-30 137.5 72 88.9
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 3.2e-30 136.3 186 40.3
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.5e-30 135.6 68 94.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.2e-26 123.6 79 78.5
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.1e-25 119.8 65 87.7
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 4.1e-25 119.4 60 95.0
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.0e-23 114.8 69 82.6
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 5.0e-23 112.5 59 96.6
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.9e-22 110.5 90 71.1
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 6.9e-17 92.0 52 86.5
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 1.2e-16 91.3 132 45.5
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.5e-14 83.6 55 76.4
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 1.0e-12 78.2 53 81.1
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 4.1e-09 66.2 37 89.2
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.6e-08 64.3 46 73.9
Aqoxy4G01620 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.0e-08 63.9 35 91.4
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.5e-08 63.2 44 75.0
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 1.0e-07 61.6 35 85.7


User provided reference genes

Program Settings