Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 0.0e+00 1254.6 676 100.0
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 4.0e-282 974.5 694 80.7
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 8.8e-253 877.1 698 72.6
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 1.5e-241 839.7 709 70.0
AL52U10020 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 6.5e-240 834.3 694 71.5
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 2.9e-224 782.3 714 66.5
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 7.5e-204 714.5 703 64.2
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 7.5e-204 714.5 703 64.2
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 7.5e-204 714.5 703 64.2
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 3.7e-203 712.2 694 65.3
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 5.0e-200 701.8 692 64.5
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 8.0e-198 694.5 709 64.3
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 1.5e-156 557.4 540 63.1
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.9e-114 417.5 572 49.7
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 9.4e-114 415.2 621 48.3
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.0e-91 342.0 370 62.2
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 5.0e-30 137.1 341 37.0
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 7.9e-28 129.8 331 36.3
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 2.3e-27 128.3 301 39.2
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 3.0e-27 127.9 465 31.6
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 3.9e-27 127.5 328 36.0
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 1.1e-26 125.9 398 32.4
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 3.3e-26 124.4 425 33.6
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 3.7e-25 120.9 537 29.6
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 1.4e-24 119.0 532 31.8
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 2.0e-23 115.2 415 32.5
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 3.4e-23 114.4 580 28.3
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 3.4e-23 114.4 603 29.7
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 4.5e-23 114.0 462 32.7
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 1.0e-22 112.8 459 31.6
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 2.9e-22 111.3 542 31.0
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 6.5e-22 110.2 314 37.6
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 8.5e-22 109.8 461 31.0
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 5.5e-21 107.1 428 32.9
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 7.2e-21 106.7 361 33.0
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 1.6e-20 105.5 407 31.2
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 2.1e-20 105.1 234 37.2
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 2.7e-20 104.8 454 29.3
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 4.6e-20 104.0 601 27.0
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 4.6e-20 104.0 349 32.7
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 6.1e-20 103.6 362 33.1
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 7.9e-20 103.2 419 29.6
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 7.9e-20 103.2 111 59.5
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 7.9e-20 103.2 711 27.8
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 1.0e-19 102.8 349 29.5
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 1.4e-19 102.4 295 36.9
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 3.0e-19 101.3 522 28.4
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 3.0e-19 101.3 275 36.0
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 3.9e-19 100.9 605 28.3
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 1.1e-18 99.4 344 32.3
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 1.5e-18 99.0 300 34.7
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 2.6e-18 98.2 557 28.4
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.3e-17 95.9 290 30.7
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 1.3e-17 95.9 346 33.5
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 2.8e-17 94.7 395 32.9
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 2.8e-17 94.7 477 30.8
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 3.7e-17 94.4 236 37.7
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 3.7e-17 94.4 252 38.9
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 8.2e-17 93.2 122 50.0
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 1.4e-16 92.4 272 33.5
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 1.8e-16 92.0 404 31.2
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 3.1e-16 91.3 675 28.0
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 3.1e-16 91.3 71 54.9
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 4.1e-16 90.9 484 29.8
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 5.3e-16 90.5 470 31.1
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 1.2e-15 89.4 330 31.5
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.5e-15 89.0 250 38.4
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 2.6e-15 88.2 400 31.5
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 2.6e-15 88.2 356 32.0
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 3.4e-15 87.8 55 76.4
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 3.4e-15 87.8 55 76.4
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 3.4e-15 87.8 494 29.4
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 4.5e-15 87.4 142 46.5
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 7.7e-15 86.7 583 26.9
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 1.7e-14 85.5 136 50.7
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 1.7e-14 85.5 247 36.8
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 2.2e-14 85.1 516 30.8
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 2.2e-14 85.1 692 27.7
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.2e-14 85.1 457 29.1
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 3.8e-14 84.3 409 30.3
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 5.0e-14 84.0 247 37.2
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 6.5e-14 83.6 451 27.7
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 8.5e-14 83.2 109 41.3
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 1.1e-13 82.8 543 27.1
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 1.9e-13 82.0 289 36.7
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 1.9e-13 82.0 336 31.5
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 3.2e-13 81.3 467 28.1
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 3.2e-13 81.3 310 34.8
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 4.2e-13 80.9 299 32.8
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 4.2e-13 80.9 596 25.3
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 5.5e-13 80.5 189 30.7
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 7.2e-13 80.1 605 25.0
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 9.4e-13 79.7 123 48.0
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.6e-12 79.0 69 58.0
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.6e-12 79.0 574 26.3
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.7e-12 78.2 623 25.8
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.0e-11 76.3 599 27.9
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 3.0e-11 74.7 200 33.5
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 3.0e-11 74.7 534 26.6
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 5.2e-11 73.9 539 26.5
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 5.2e-11 73.9 325 31.4
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 8.8e-11 73.2 514 27.6
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 2.6e-10 71.6 375 27.7
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 2.6e-10 71.6 572 26.7
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 3.3e-10 71.2 182 37.9
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 5.7e-10 70.5 602 25.7
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 5.7e-10 70.5 370 31.1
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 7.4e-10 70.1 295 31.5
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 1.3e-09 69.3 56 67.9
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 2.8e-09 68.2 574 26.5
SMO147G0117 Selaginella moellendorffii HOM05D010535 ORTHO05D005895 2.8e-09 68.2 70 52.9
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 6.3e-09 67.0 359 30.9
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 2.4e-08 65.1 731 24.5
Hma1.2p1_3164F.1_g333530 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 4.1e-08 64.3 68 42.6
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 7.0e-08 63.5 245 32.2
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 1.2e-07 62.8 348 26.7
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 1.6e-07 62.4 176 34.7
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 3.5e-07 61.2 632 24.8
Hma1.2p1_1540F.1_g289660 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 4.5e-07 60.8 148 33.1


User provided reference genes

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