Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G54340 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 3.3e-133 478.4 245 100.0
AL8G29770 Arabidopsis lyrata HOM05D017374 ORTHO05D018424 2.9e-97 359.0 221 87.3
AL8G29650 Arabidopsis lyrata HOM05D017374 ORTHO05D018424 6.1e-87 324.7 251 77.3
AT5G54360 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 8.6e-33 144.8 281 41.6
Carub.0008s1467 Capsella rubella HOM05D017374 ORTHO05D018424 7.1e-19 98.6 75 68.0
Carub.0006s2470 Capsella rubella HOM05D008496 ORTHO05D010729 2.1e-18 97.1 189 38.1
Sp2g21000 Schrenkiella parvula HOM05D008496 ORTHO05D010729 5.1e-17 92.4 216 35.2
Carub.0008s1468 Capsella rubella HOM05D017374 ORTHO05D018424 2.1e-15 87.0 273 30.0
CARHR292220 Cardamine hirsuta HOM05D008496 ORTHO05D010729 8.1e-15 85.1 176 38.1
CARHR183000 Cardamine hirsuta HOM05D008496 ORTHO05D010729 1.1e-14 84.7 239 32.6
Sp6g16360 Schrenkiella parvula HOM05D016277 ORTHO05D014491 1.8e-14 84.0 390 28.5
CARHR292330 Cardamine hirsuta HOM05D008496 ORTHO05D010729 2.4e-14 83.6 159 38.4
AL6G39050 Arabidopsis lyrata HOM05D008496 ORTHO05D010729 4.0e-14 82.8 132 37.1
CARHR186360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 1.5e-13 80.9 183 35.5
BcaB07g34208 Brassica carinata HOM05D008496 ORTHO05D010729 4.4e-13 79.3 86 47.7
AT5G27880 Arabidopsis thaliana HOM05D008496 ORTHO05D010729 9.9e-13 78.2 181 34.8
A06p37240 Brassica napus HOM05D008496 ORTHO05D010729 4.9e-12 75.9 201 33.8
BraA06t26648Z Brassica rapa HOM05D008496 ORTHO05D010729 4.9e-12 75.9 201 33.8
A02p38800 Brassica napus HOM05D008496 ORTHO05D010729 6.4e-12 75.5 85 44.7
BraA02t08856Z Brassica rapa HOM05D008496 ORTHO05D010729 6.4e-12 75.5 85 44.7
Thhalv10005521m.g Eutrema salsugineum HOM05D008496 ORTHO05D010729 1.9e-11 73.9 165 35.2
A03p14690 Brassica napus HOM05D016277 ORTHO05D014491 2.4e-11 73.6 294 29.6
BraA03t10760Z Brassica rapa HOM05D016277 ORTHO05D014491 2.4e-11 73.6 294 29.6
BolC7t44648H Brassica oleracea HOM05D008496 ORTHO05D010729 3.2e-11 73.2 192 33.3
BcaC03g17812 Brassica carinata HOM05D008496 ORTHO05D010729 7.1e-11 72.0 126 40.5
BcaNung04743 Brassica carinata HOM05D008496 ORTHO05D010729 7.1e-11 72.0 144 39.6
BolC2t11900H Brassica oleracea HOM05D008496 ORTHO05D010729 7.1e-11 72.0 126 40.5
C07p41230 Brassica napus HOM05D008496 ORTHO05D010729 1.6e-10 70.9 192 32.8
CARHR266170 Cardamine hirsuta HOM05D008496 ORTHO05D010729 1.6e-10 70.9 206 31.6
BolC2t07812H Brassica oleracea HOM05D021249 ORTHO05D014491 3.5e-10 69.7 257 28.4
Aa31LG11G9630 Aethionema arabicum HOM05D008496 ORTHO05D010729 4.6e-10 69.3 88 44.3
C02p58360 Brassica napus HOM05D008496 ORTHO05D010729 7.8e-10 68.6 169 34.9
C02p17120 Brassica napus HOM05D021249 ORTHO05D014491 1.3e-09 67.8 257 28.0
AT5G54350 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 3.9e-09 66.2 92 48.9
BcaC03g14348 Brassica carinata HOM05D021249 ORTHO05D014491 6.6e-09 65.5 252 27.8
A02p10390 Brassica napus HOM05D021249 ORTHO05D014491 1.1e-08 64.7 255 26.7
BraA02t06105Z Brassica rapa HOM05D021249 ORTHO05D014491 1.1e-08 64.7 255 26.7
BcaB04g19693 Brassica carinata HOM05D008496 ORTHO05D010729 5.6e-08 62.4 128 37.5
CARHR182980 Cardamine hirsuta HOM05D008496 ORTHO05D010729 6.2e-07 58.9 115 34.8
BcaC04g23648 Brassica carinata HOM05D008496 ORTHO05D010729 1.4e-06 57.8 115 33.9
A09p05480 Brassica napus HOM05D008496 ORTHO05D010729 1.4e-06 57.8 115 34.8
C09p05960 Brassica napus HOM05D008496 ORTHO05D010729 1.4e-06 57.8 115 33.9
BolC9t53521H Brassica oleracea HOM05D008496 ORTHO05D010729 1.4e-06 57.8 115 33.9
BraA09t36186Z Brassica rapa HOM05D008496 ORTHO05D010729 1.4e-06 57.8 115 34.8
BcaB04g19694 Brassica carinata HOM05D008496 ORTHO05D010729 6.9e-06 55.5 100 35.0


User provided reference genes

Program Settings