Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 6.2e-106 387.9 260 100.0
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 5.8e-80 301.6 238 92.9
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 5.8e-80 301.6 241 90.9
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 2.1e-77 293.1 241 88.0
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 1.4e-73 280.4 264 79.9
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 2.6e-72 276.2 242 85.1
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 4.2e-70 268.9 240 85.4
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 3.6e-69 265.8 256 82.0
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 6.1e-69 265.0 256 82.0
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 3.9e-68 262.3 242 85.1
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 3.9e-68 262.3 242 85.1
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 4.5e-64 248.8 262 78.6
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 1.2e-53 214.2 241 74.7
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 5.7e-51 205.3 241 72.2
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 2.8e-50 203.0 241 71.4
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 4.8e-50 202.2 241 71.4
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 1.1e-49 201.1 167 99.4
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 5.3e-49 198.7 240 69.2
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 3.5e-48 196.1 242 68.6
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 1.0e-47 194.5 242 67.8
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 1.0e-47 194.5 241 66.8
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 1.3e-47 194.1 241 68.9
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-47 194.1 243 66.7
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 1.7e-47 193.7 242 68.6
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 3.8e-47 192.6 234 68.4
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 3.8e-47 192.6 214 74.8
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 5.0e-47 192.2 241 67.2
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 5.0e-47 192.2 244 69.3
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 6.5e-47 191.8 241 68.9
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.5e-47 191.8 191 80.1
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 8.5e-47 191.4 226 71.2
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 1.1e-46 191.0 255 63.9
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 1.1e-46 191.0 235 68.9
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 1.5e-46 190.7 206 77.2
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 1.5e-46 190.7 248 65.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.9e-46 190.3 191 80.1
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 2.5e-46 189.9 245 67.3
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 3.2e-46 189.5 241 66.4
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 3.2e-46 189.5 241 66.8
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 3.2e-46 189.5 210 74.3
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 4.2e-46 189.1 191 79.6
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 4.2e-46 189.1 236 70.3
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 5.5e-46 188.7 216 72.2
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 5.5e-46 188.7 213 75.1
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 7.2e-46 188.3 251 65.3
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 7.2e-46 188.3 241 66.8
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 7.2e-46 188.3 237 69.2
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 1.2e-45 187.6 205 76.6
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 1.2e-45 187.6 206 75.7
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 1.6e-45 187.2 213 75.1
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.6e-45 187.2 213 75.1
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 1.6e-45 187.2 208 76.9
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 1.6e-45 187.2 191 79.1
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 2.1e-45 186.8 242 66.9
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 4.7e-45 185.7 244 67.6
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 1.0e-44 184.5 194 81.4
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.0e-44 184.5 213 74.6
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 1.4e-44 184.1 235 68.1
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.8e-44 183.7 191 51.8
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 2.3e-44 183.3 214 71.5
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 2.3e-44 183.3 191 79.6
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 3.0e-44 183.0 204 74.0
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 4.0e-44 182.6 191 78.0
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 4.0e-44 182.6 216 72.2
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 5.2e-44 182.2 206 74.8
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 5.2e-44 182.2 240 66.7
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 5.2e-44 182.2 238 66.4
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 6.7e-44 181.8 185 76.8
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 6.7e-44 181.8 229 69.0
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 6.7e-44 181.8 224 58.5
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 6.7e-44 181.8 241 67.6
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 8.8e-44 181.4 184 82.1
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 1.2e-43 181.0 238 66.0
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 1.5e-43 180.6 253 63.6
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 2.6e-43 179.9 238 66.8
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.3e-43 179.5 190 77.9
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 3.3e-43 179.5 211 72.0
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 3.3e-43 179.5 241 66.0
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 3.3e-43 179.5 238 64.7
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 4.4e-43 179.1 216 73.6
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.4e-43 179.1 241 64.7
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 4.4e-43 179.1 230 69.1
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 7.5e-43 178.3 242 66.1
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.5e-43 178.3 191 61.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 7.5e-43 178.3 188 78.7
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 7.5e-43 178.3 197 77.2
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 2.8e-42 176.4 241 64.7
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 2.8e-42 176.4 221 70.1
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 2.8e-42 176.4 206 71.8
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.7e-42 176.0 185 77.8
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 1.1e-41 174.5 183 78.1
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 1.8e-41 173.7 238 64.7
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 1.8e-41 173.7 191 77.0
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 2.4e-41 173.3 213 56.8
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 4.1e-41 172.6 144 61.1
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 5.3e-41 172.2 209 73.7
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 7.0e-41 171.8 212 73.6
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 7.0e-41 171.8 185 79.5
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 2.0e-40 170.2 183 80.3
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 2.0e-40 170.2 184 79.3
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.5e-40 169.5 191 49.7
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 1.9e-38 163.7 198 71.7
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 3.2e-38 162.9 206 59.7
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 9.4e-38 161.4 133 60.9
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.1e-37 160.2 138 60.1
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 2.7e-37 159.8 209 69.9
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-36 157.5 121 65.3
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-36 157.5 121 65.3
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.0e-36 156.4 121 64.5
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 5.2e-36 155.6 121 63.6
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 8.8e-36 154.8 157 86.0
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 8.8e-36 154.8 169 80.5
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-35 154.1 121 63.6
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-35 154.1 121 64.5
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-35 153.3 121 63.6
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 7.5e-35 151.8 212 66.0
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.2e-34 150.2 241 60.2
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 1.1e-33 147.9 210 63.8
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-33 147.5 182 50.5
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.4e-33 146.7 174 47.7
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.4e-33 146.7 174 47.7
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 8.6e-31 138.3 125 58.4
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 8.0e-29 131.7 182 47.8
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 4.0e-28 129.4 101 66.3
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.2e-28 129.0 71 83.1
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 1.5e-27 127.5 156 76.3
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 1.1e-22 111.3 191 64.4
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 2.0e-16 90.5 58 67.2
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 3.7e-10 69.7 152 32.9
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 3.9e-07 59.7 115 73.0


User provided reference genes

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