Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 2.8e-132 475.3 243 100.0
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 9.9e-82 307.4 190 86.8
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 9.4e-64 247.7 142 94.4
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 3.6e-63 245.7 147 89.8
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 4.6e-63 245.4 181 78.5
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 5.7e-61 238.4 178 76.4
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 6.3e-60 235.0 141 89.4
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 4.5e-58 228.8 139 89.2
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 5.9e-58 228.4 139 90.6
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 5.9e-58 228.4 139 90.6
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 5.9e-58 228.4 139 90.6
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 4.8e-52 208.8 136 80.1
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 5.3e-43 178.7 135 68.9
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 4.2e-40 169.1 132 67.4
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 3.6e-39 166.0 132 71.2
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 8.0e-39 164.9 120 71.7
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 8.0e-39 164.9 126 67.5
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 8.0e-39 164.9 118 74.6
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.0e-38 164.5 129 65.9
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 1.4e-38 164.1 111 73.9
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 1.4e-38 164.1 115 73.0
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 1.8e-38 163.7 137 66.4
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 2.3e-38 163.3 131 67.2
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 2.3e-38 163.3 131 67.2
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 3.0e-38 162.9 131 66.4
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 4.0e-38 162.5 130 65.4
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 8.8e-38 161.4 131 66.4
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 8.8e-38 161.4 118 71.2
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 8.8e-38 161.4 126 68.3
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.5e-37 160.6 118 70.3
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 2.0e-37 160.2 131 62.6
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 7.5e-37 158.3 122 65.6
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 7.5e-37 158.3 135 65.2
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 7.5e-37 158.3 135 65.2
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.3e-36 157.5 133 63.9
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 2.2e-36 156.8 123 67.5
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 2.2e-36 156.8 132 65.2
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 2.8e-36 156.4 123 67.5
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 3.7e-36 156.0 117 67.5
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.1e-35 154.5 162 53.7
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 1.4e-35 154.1 118 66.9
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 2.4e-35 153.3 118 65.3
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.4e-35 153.3 122 64.8
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 3.1e-35 152.9 118 68.6
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 4.1e-35 152.5 133 60.9
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 4.1e-35 152.5 119 69.7
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 7.0e-35 151.8 127 61.4
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 9.1e-35 151.4 129 58.9
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 9.1e-35 151.4 114 69.3
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 1.2e-34 151.0 118 66.9
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.2e-34 151.0 114 69.3
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.2e-34 151.0 147 55.8
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.6e-34 150.6 124 64.5
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.0e-34 150.2 133 58.6
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.7e-34 149.8 135 63.7
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 3.5e-34 149.4 147 55.1
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 3.5e-34 149.4 115 67.0
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 3.5e-34 149.4 137 63.5
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 4.5e-34 149.1 115 67.8
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 5.9e-34 148.7 133 64.7
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 5.9e-34 148.7 112 69.6
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.8e-33 146.0 112 67.0
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 5.0e-33 145.6 97 83.5
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 5.0e-33 145.6 129 61.2
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 5.0e-33 145.6 117 64.1
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 8.5e-33 144.8 118 61.9
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 1.1e-32 144.4 118 61.0
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 3.2e-32 142.9 129 59.7
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 5.5e-32 142.1 113 67.3
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 5.5e-32 142.1 118 61.0
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 7.2e-32 141.7 122 62.3
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.2e-31 141.0 129 58.9
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 2.1e-31 140.2 119 63.0
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 3.6e-31 139.4 106 64.2
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 6.1e-31 138.7 149 53.0
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.0e-30 137.9 131 58.8
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.8e-30 137.1 132 58.3
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.3e-30 136.7 137 56.2
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 5.2e-30 135.6 109 64.2
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 8.8e-30 134.8 118 61.0
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 8.8e-30 134.8 109 66.1
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 1.2e-29 134.4 107 65.4
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 2.0e-29 133.7 109 66.1
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 2.6e-29 133.3 99 67.7
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 3.4e-29 132.9 115 60.9
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.3e-28 131.0 118 60.2
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.3e-28 131.0 119 60.5
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 2.8e-28 129.8 143 55.2
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.4e-27 126.7 124 58.1
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 3.1e-27 126.3 136 51.5
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 3.1e-27 126.3 119 58.8
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 4.1e-27 125.9 89 71.9
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.6e-26 124.0 124 56.5
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 7.7e-26 121.7 89 68.5
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.3e-25 120.9 89 68.5
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.8e-25 119.4 89 67.4
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 8.6e-25 118.2 80 85.0
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.9e-24 117.1 81 67.9
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.9e-24 117.1 81 67.9
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 5.5e-24 115.5 86 68.6
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 7.2e-24 115.2 111 52.3
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.6e-23 114.0 109 55.0
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 3.6e-23 112.8 146 46.6
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 8.9e-22 108.2 118 56.8
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.2e-21 107.8 75 68.0
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 1.3e-20 104.4 98 53.1
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.7e-20 104.0 76 64.5
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.6e-18 97.4 80 62.5
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 7.8e-18 95.1 67 68.7
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 3.3e-16 89.7 136 43.4
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 6.1e-15 85.5 67 68.7
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 3.4e-13 79.7 107 40.2
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.2e-07 61.2 92 41.3
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 1.4e-06 57.8 60 50.0
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 1.8e-06 57.4 39 66.7
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 3.1e-06 56.6 51 56.9


User provided reference genes

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