Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 1.8e-105 386.3 261 100.0
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 4.2e-94 348.6 266 91.7
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 2.3e-92 342.8 261 88.1
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 9.6e-91 337.4 267 89.9
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 1.3e-90 337.0 261 88.1
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 2.5e-86 322.8 272 82.7
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 1.6e-85 320.1 271 85.2
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 6.1e-85 318.2 261 75.9
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 5.1e-84 315.1 261 84.3
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 1.8e-73 280.0 261 77.8
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 4.1e-73 278.9 261 82.0
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 1.4e-65 253.8 276 73.6
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 3.4e-51 206.1 280 62.5
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 7.5e-51 204.9 297 59.6
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 2.8e-50 203.0 277 63.5
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 6.3e-50 201.8 271 56.8
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 5.9e-48 195.3 282 57.8
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 7.7e-48 194.9 317 58.0
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.7e-48 194.9 272 63.2
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 8.5e-47 191.4 283 57.6
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 8.5e-47 191.4 330 55.2
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 1.1e-46 191.0 276 59.8
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 2.5e-46 189.9 276 61.6
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 7.2e-46 188.3 273 61.5
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 9.4e-46 188.0 269 55.0
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 9.4e-46 188.0 269 52.0
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 9.4e-46 188.0 303 58.7
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 2.1e-45 186.8 276 62.0
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.1e-45 186.8 270 56.3
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 3.6e-45 186.0 295 59.7
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 8.0e-45 184.9 303 59.4
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 8.0e-45 184.9 292 61.3
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 8.0e-45 184.9 317 55.5
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 1.0e-44 184.5 298 60.1
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.0e-44 184.5 322 55.6
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 1.0e-44 184.5 298 56.4
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 1.8e-44 183.7 321 54.5
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 1.8e-44 183.7 271 52.4
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 2.3e-44 183.3 303 56.1
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 2.3e-44 183.3 128 81.2
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 2.3e-44 183.3 265 47.9
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 2.3e-44 183.3 317 58.7
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 3.0e-44 183.0 286 58.0
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 3.0e-44 183.0 297 57.6
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 3.0e-44 183.0 299 57.9
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 5.2e-44 182.2 269 61.3
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 5.2e-44 182.2 316 56.3
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 6.8e-44 181.8 318 52.2
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 6.8e-44 181.8 296 54.7
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.2e-43 181.0 265 58.5
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.2e-43 181.0 309 57.0
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 2.0e-43 180.3 305 57.7
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 3.4e-43 179.5 322 54.3
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 3.4e-43 179.5 303 58.1
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 9.8e-43 177.9 307 56.7
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 9.8e-43 177.9 315 53.3
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 1.7e-42 177.2 315 53.7
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 2.8e-42 176.4 319 55.2
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 3.7e-42 176.0 318 56.0
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 3.7e-42 176.0 300 54.0
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 6.3e-42 175.3 285 56.1
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 6.3e-42 175.3 317 52.7
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 8.3e-42 174.9 336 50.6
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 1.1e-41 174.5 302 56.6
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 1.1e-41 174.5 290 58.6
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 1.4e-41 174.1 128 78.1
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.8e-41 173.7 292 59.9
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 2.4e-41 173.3 315 57.1
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 2.4e-41 173.3 302 43.0
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 3.1e-41 172.9 289 62.6
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 5.4e-41 172.2 295 61.4
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 5.4e-41 172.2 323 56.7
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 7.0e-41 171.8 313 55.9
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 7.0e-41 171.8 327 50.8
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.2e-40 171.0 288 59.4
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 1.6e-40 170.6 121 76.9
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 1.6e-40 170.6 291 57.0
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 2.7e-40 169.9 131 74.0
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 3.5e-40 169.5 314 51.9
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 3.5e-40 169.5 288 58.3
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 3.5e-40 169.5 123 75.6
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 3.5e-40 169.5 310 55.2
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 4.5e-40 169.1 263 44.5
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 4.5e-40 169.1 298 58.1
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 7.7e-40 168.3 314 53.8
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 1.0e-39 167.9 316 52.8
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 2.3e-39 166.8 315 54.0
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 2.9e-39 166.4 132 71.2
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 3.8e-39 166.0 311 56.6
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 5.0e-39 165.6 306 54.6
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-38 164.5 282 58.9
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.1e-38 164.5 288 58.0
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 1.5e-38 164.1 264 61.4
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 1.5e-38 164.1 277 56.0
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 3.3e-38 162.9 317 53.0
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 3.3e-38 162.9 290 55.2
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 7.3e-38 161.8 285 58.2
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 9.5e-38 161.4 261 57.5
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.2e-37 161.0 305 54.1
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 1.6e-37 160.6 114 76.3
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 4.7e-37 159.1 365 46.8
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 6.1e-37 158.7 124 71.8
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 8.0e-37 158.3 263 63.1
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 2.0e-35 153.7 139 62.6
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 3.4e-35 152.9 351 45.6
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 7.5e-35 151.8 97 80.4
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 7.5e-35 151.8 264 61.0
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 1.7e-34 150.6 102 79.4
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 2.4e-33 146.7 291 51.5
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 4.1e-33 146.0 281 51.2
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 5.4e-33 145.6 120 66.7
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 9.2e-33 144.8 95 77.9
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 4.6e-32 142.5 113 71.7
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 3.9e-31 139.4 128 62.5
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 3.9e-31 139.4 112 66.1
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 3.9e-31 139.4 112 66.1
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 2.1e-29 133.7 96 75.0
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 3.6e-29 132.9 93 75.3
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.4e-28 131.0 274 52.6
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 9.5e-22 108.2 78 73.1
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.6e-21 107.5 248 51.6
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.2e-21 105.5 241 52.3
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 1.8e-20 104.0 259 51.7
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 8.9e-20 101.7 224 50.4
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 8.9e-20 101.7 311 34.7
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 7.3e-14 82.0 136 44.9
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 1.2e-11 74.7 97 44.3
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 1.2e-11 74.7 91 51.6
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.0e-11 73.9 288 45.8
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 4.9e-10 69.3 51 62.7
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 1.6e-08 64.3 244 41.8


User provided reference genes

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