Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.2e-228 795.4 435 100.0
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 3.1e-219 765.0 435 96.1
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 3.1e-211 738.4 435 91.5
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.1e-208 729.9 435 89.4
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 8.0e-207 723.8 435 90.6
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.0e-205 719.2 435 91.0
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 8.0e-199 697.2 437 86.0
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 2.3e-198 695.7 437 86.0
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.0e-197 692.6 431 86.3
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 2.8e-191 672.2 441 86.2
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.7e-185 652.9 435 83.7
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.5e-173 613.2 429 80.9
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 3.7e-164 582.0 434 74.0
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 2.9e-132 476.1 382 65.4
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 8.4e-132 474.6 376 65.7
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 5.1e-129 465.3 389 65.0
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 3.3e-128 462.6 368 66.6
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.3e-127 460.7 371 66.8
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 4.8e-127 458.8 411 61.3
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 2.4e-126 456.4 346 67.1
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 4.0e-126 455.7 367 64.6
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 5.3e-126 455.3 375 64.8
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 9.0e-126 454.5 367 66.5
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.8e-125 451.8 349 66.5
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 7.6e-125 451.4 347 65.7
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.3e-124 450.7 371 65.0
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.7e-124 450.3 370 65.7
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.7e-124 450.3 371 63.1
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 6.5e-124 448.4 378 63.8
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 8.4e-124 448.0 377 63.4
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.5e-123 446.4 377 62.6
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 2.5e-123 446.4 382 63.1
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 3.2e-123 446.0 381 62.7
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 5.5e-123 445.3 346 66.8
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 7.1e-123 444.9 346 66.5
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 7.1e-123 444.9 375 62.4
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 7.1e-123 444.9 377 62.9
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.2e-122 444.1 383 64.0
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.6e-122 443.7 342 65.2
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.6e-122 443.7 381 63.3
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.6e-122 443.7 380 62.9
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 2.1e-122 443.4 378 62.7
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 2.7e-122 443.0 345 65.5
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 6.1e-122 441.8 388 63.1
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 7.9e-122 441.4 380 61.1
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.8e-121 440.3 348 65.8
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 3.9e-121 439.1 381 63.0
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 6.7e-121 438.3 372 61.6
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.1e-120 437.6 370 60.8
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.1e-120 437.6 359 63.5
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.9e-120 436.8 345 65.8
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 2.5e-120 436.4 347 66.0
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.6e-119 433.7 380 60.3
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 1.6e-119 433.7 350 67.1
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 2.2e-119 433.3 373 60.1
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 6.3e-119 431.8 384 61.7
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 6.3e-119 431.8 381 61.7
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 6.3e-119 431.8 349 65.0
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.1e-118 431.0 380 60.5
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 1.1e-118 431.0 380 61.6
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 1.1e-118 431.0 379 61.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 1.4e-118 430.6 372 61.0
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 4.1e-118 429.1 373 62.2
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.0e-117 426.8 378 59.3
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 3.4e-117 426.0 381 61.2
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.0e-116 424.5 378 59.3
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 1.3e-116 424.1 370 61.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 1.7e-116 423.7 344 63.4
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.9e-116 422.9 368 60.9
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 5.0e-116 422.2 378 59.3
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.1e-115 421.0 379 59.4
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 1.9e-115 420.2 380 58.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 9.4e-115 417.9 338 63.9
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 9.4e-115 417.9 421 54.9
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.2e-114 417.5 371 58.8
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 4.6e-114 415.6 334 64.1
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 7.9e-114 414.8 377 59.4
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.8e-113 413.7 380 58.2
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 3.3e-112 409.5 380 57.4
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 7.4e-112 408.3 443 52.8
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 1.7e-111 407.1 349 61.0
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 1.7e-111 407.1 313 68.1
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 3.7e-111 406.0 371 58.8
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.1e-110 402.9 370 58.6
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.2e-109 401.0 344 60.8
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.2e-109 401.0 374 59.6
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 8.5e-108 394.8 354 59.6
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.9e-107 393.7 371 59.3
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.2e-106 391.0 339 60.8
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 4.7e-106 389.0 378 57.7
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 5.7e-104 382.1 385 56.1
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 9.1e-94 348.2 295 60.7
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.1e-91 341.3 241 70.5
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 1.1e-86 324.7 393 47.8
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.8e-86 323.9 377 49.9
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 2.4e-86 323.6 372 51.3
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.5e-83 314.3 356 50.6
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 1.6e-82 310.8 262 61.8
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 5.9e-77 292.4 345 50.1
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.6e-74 284.3 213 66.7
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 1.8e-70 270.8 350 44.3
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 3.9e-68 263.1 215 66.0
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.9e-67 260.8 359 41.5
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 3.3e-67 260.0 207 65.7
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 2.0e-64 250.8 350 42.9
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 6.8e-57 225.7 353 41.6
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 3.5e-53 213.4 224 50.0
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 1.8e-41 174.5 174 55.7
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 2.1e-37 161.0 175 53.1
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.4e-30 138.3 243 37.4
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 2.8e-26 124.0 78 76.9
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 1.5e-19 101.7 102 54.9
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 1.6e-18 98.2 96 54.2
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 5.3e-17 93.2 105 48.6
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.5e-16 91.7 199 31.7
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 3.4e-16 90.5 349 25.5
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 1.7e-15 88.2 120 47.5
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.1e-09 67.4 344 24.1


User provided reference genes

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