Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 0.0e+00 1161.0 563 100.0
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 0.0e+00 1149.0 563 98.8
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 0.0e+00 1131.7 563 97.2
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 0.0e+00 1127.9 563 96.8
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 0.0e+00 1118.6 563 95.7
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 0.0e+00 1115.5 563 95.6
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 0.0e+00 1114.4 563 95.2
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 0.0e+00 1110.9 563 95.4
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 0.0e+00 1109.4 563 95.2
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 0.0e+00 1093.2 571 93.0
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 0.0e+00 1091.3 563 92.9
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 9.4e-301 1036.2 557 89.4
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 6.5e-294 1013.4 549 86.2
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 8.5e-294 1013.1 560 84.8
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 1.1e-293 1012.7 549 86.0
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 4.0e-291 1004.2 550 86.7
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 8.8e-291 1003.0 549 85.6
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 8.8e-291 1003.0 550 86.5
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 8.8e-291 1003.0 550 86.4
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 1.2e-290 1002.7 549 85.8
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.0e-290 1001.9 550 86.5
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 2.6e-290 1001.5 549 86.2
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 5.7e-290 1000.3 549 85.2
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 9.7e-290 999.6 549 85.2
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 2.2e-289 998.4 549 85.4
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 8.2e-289 996.5 552 84.1
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 2.4e-288 995.0 549 85.1
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 7.0e-288 993.4 553 86.1
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 1.2e-287 992.6 556 83.3
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 1.6e-287 992.3 549 84.7
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 4.5e-287 990.7 552 84.2
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 5.9e-287 990.3 559 83.9
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 5.9e-287 990.3 551 85.5
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.0e-286 989.6 564 82.6
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 2.2e-286 988.4 568 81.9
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 2.9e-286 988.0 549 84.2
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 2.9e-286 988.0 551 85.8
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 1.1e-285 986.1 549 84.0
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 1.1e-285 986.1 549 83.6
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 1.9e-285 985.3 549 83.8
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 4.2e-285 984.2 552 84.2
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 4.2e-285 984.2 549 83.6
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 5.5e-285 983.8 549 83.8
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 9.4e-285 983.0 549 83.8
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 9.4e-285 983.0 549 84.0
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.2e-284 982.6 549 84.0
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 2.1e-284 981.9 564 82.6
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 3.6e-284 981.1 549 83.6
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 3.6e-284 981.1 552 83.5
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 1.8e-283 978.8 546 84.1
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 2.3e-283 978.4 549 82.9
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 4.0e-283 977.6 549 83.2
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 8.8e-283 976.5 549 82.9
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 1.2e-282 976.1 551 83.3
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 1.2e-282 976.1 549 83.1
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 7.5e-282 973.4 549 83.1
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 1.3e-281 972.6 553 83.0
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 1.3e-281 972.6 551 83.7
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 3.7e-281 971.1 553 82.1
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 1.1e-280 969.5 548 83.4
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 1.4e-280 969.1 552 82.1
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 9.1e-280 966.5 552 81.7
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 1.2e-279 966.1 547 83.5
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 2.7e-279 964.9 549 82.5
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 3.5e-279 964.5 549 82.5
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 5.9e-279 963.8 573 79.9
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 1.0e-278 963.0 549 82.3
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 1.7e-278 962.2 547 82.6
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 2.3e-278 961.8 549 82.3
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.8e-278 961.1 555 81.8
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 5.0e-278 960.7 546 82.6
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 8.6e-278 959.9 552 82.2
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 1.5e-277 959.1 579 78.6
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 1.2e-274 949.5 549 80.1
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 2.6e-274 948.3 550 81.1
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 2.6e-274 948.3 549 80.9
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 2.6e-274 948.3 549 80.9
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 3.4e-274 948.0 542 81.5
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 1.3e-273 946.0 548 80.1
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.4e-272 942.6 549 80.1
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 1.2e-271 939.5 546 80.0
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 1.6e-271 939.1 546 81.0
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 7.8e-271 936.8 549 80.0
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 2.9e-270 934.9 569 77.2
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 2.9e-270 934.9 549 79.8
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 8.6e-270 933.3 569 78.0
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 4.3e-269 931.0 541 81.0
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 9.5e-269 929.9 545 79.4
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 1.0e-267 926.4 543 81.0
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 8.9e-267 923.3 499 87.4
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 1.2e-266 922.9 544 80.0
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 9.8e-266 919.8 513 84.4
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 4.9e-265 917.5 549 79.1
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.1e-264 916.4 554 79.8
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 2.5e-261 905.2 542 78.0
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 5.8e-258 894.0 549 78.7
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 3.2e-256 888.3 552 77.4
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 2.5e-253 878.6 543 76.4
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 4.7e-252 874.4 555 76.6
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 8.9e-251 870.2 549 75.6
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 9.9e-250 866.7 549 75.8
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 9.9e-250 866.7 538 75.7
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 1.3e-249 866.3 545 75.4
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.3e-249 866.3 538 75.7
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 1.1e-248 863.2 497 80.3
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 3.6e-244 848.2 559 72.6
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 7.6e-242 840.5 550 72.9
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 5.1e-238 827.8 555 73.9
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 4.0e-235 818.1 544 73.7
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 4.9e-233 811.2 455 85.5
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 2.7e-231 805.4 503 76.7
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 5.6e-229 797.7 549 69.8
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 1.4e-227 793.1 552 70.8
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 2.4e-224 782.3 541 69.1
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 6.0e-223 777.7 539 67.5
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 1.5e-221 773.1 423 86.8
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 2.5e-221 772.3 424 86.3
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 4.3e-213 745.0 536 66.8
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 9.0e-211 737.3 540 65.7
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 2.7e-207 725.7 539 64.9
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.4e-200 703.4 531 64.8
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.4e-200 703.4 531 64.8
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 3.1e-195 685.6 609 60.4
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 1.0e-166 590.9 330 84.8
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 2.4e-163 579.7 334 81.4
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 4.9e-156 555.4 555 55.9
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 1.2e-146 524.2 292 84.9
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 1.3e-145 520.8 546 50.0
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 7.1e-131 471.9 306 73.5
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 7.1e-131 471.9 309 74.8
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 6.0e-122 442.2 350 65.4
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 4.5e-101 372.9 199 87.9
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 7.4e-88 328.9 200 79.5
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.0e-85 320.9 501 40.9
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 8.2e-71 272.3 335 44.8
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 2.0e-61 241.1 129 89.9
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 1.5e-59 235.0 137 83.9
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 3.6e-58 230.3 133 82.0
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 1.8e-57 228.0 139 77.7
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 5.2e-57 226.5 127 86.6
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 5.2e-57 226.5 127 86.6
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 3.7e-55 220.3 120 87.5
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 3.7e-55 220.3 120 87.5
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 3.8e-52 210.3 119 85.7
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 3.8e-52 210.3 119 85.7
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 1.2e-48 198.7 109 78.9
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 4.1e-46 190.3 111 75.7
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.0e-44 185.7 114 72.8
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 6.6e-44 183.0 119 72.3
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 5.2e-41 173.3 95 81.1
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 5.0e-36 156.8 76 92.1
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 2.2e-31 141.4 79 83.5
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 2.6e-24 117.9 118 49.2
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 2.6e-24 117.9 189 41.8
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.4e-24 117.1 86 62.8
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 2.4e-22 111.3 121 47.9
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 1.3e-20 105.5 62 74.2
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 8.4e-15 86.3 63 66.7


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