Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 5.5e-56 220.7 109 100.0
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 3.7e-44 181.4 91 98.9
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 2.6e-42 175.3 91 95.6
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 2.5e-40 168.7 91 94.5
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 1.2e-39 166.4 91 93.4
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 8.0e-39 163.7 91 92.3
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 2.3e-38 162.2 89 89.9
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 2.3e-38 162.2 89 89.9
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 6.7e-38 160.6 89 89.9
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.2e-37 159.8 89 91.0
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.2e-37 159.8 89 91.0
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 7.5e-37 157.1 77 100.0
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 7.7e-34 147.1 75 96.0
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 3.7e-28 128.3 75 85.3
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 8.3e-28 127.1 75 81.3
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 8.3e-28 127.1 75 81.3
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.1e-27 126.7 79 77.2
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.1e-27 126.7 75 82.7
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.8e-27 125.9 75 81.3
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 1.8e-27 125.9 78 80.8
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 2.4e-27 125.6 75 80.0
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 3.1e-27 125.2 75 78.7
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 5.4e-27 124.4 75 78.7
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 5.4e-27 124.4 75 81.3
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 5.4e-27 124.4 75 78.7
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 5.4e-27 124.4 75 80.0
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 5.4e-27 124.4 75 80.0
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 7.0e-27 124.0 75 81.3
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 9.1e-27 123.6 75 80.0
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.2e-26 123.2 75 78.7
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 1.2e-26 123.2 75 80.0
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.2e-26 123.2 75 80.0
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 2.7e-26 122.1 88 71.6
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 2.7e-26 122.1 75 78.7
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 2.7e-26 122.1 75 78.7
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 3.5e-26 121.7 77 79.2
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 3.5e-26 121.7 75 80.0
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 7.7e-26 120.6 74 78.4
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 7.7e-26 120.6 83 75.9
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.0e-25 120.2 75 77.3
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 1.0e-25 120.2 75 77.3
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.7e-25 119.4 81 76.5
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.7e-25 119.4 81 76.5
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 1.7e-25 119.4 75 77.3
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.3e-25 119.0 75 73.3
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.9e-25 118.6 81 76.5
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.9e-25 118.6 75 74.7
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 2.9e-25 118.6 75 76.0
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 2.9e-25 118.6 75 76.0
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 3.8e-25 118.2 81 75.3
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 3.8e-25 118.2 75 78.7
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 3.8e-25 118.2 75 78.7
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 5.0e-25 117.9 93 65.6
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 5.0e-25 117.9 81 67.9
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 6.5e-25 117.5 75 73.3
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 8.6e-25 117.1 80 67.5
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 8.6e-25 117.1 75 74.7
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 8.6e-25 117.1 76 76.3
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 1.1e-24 116.7 75 76.0
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.1e-24 116.7 81 67.9
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.1e-24 116.7 75 74.7
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 1.1e-24 116.7 75 73.3
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.5e-24 116.3 74 71.6
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 1.5e-24 116.3 75 74.7
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.5e-24 116.3 93 64.5
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.5e-24 116.3 93 65.6
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.5e-24 116.3 93 65.6
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.5e-24 116.3 75 76.0
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.5e-24 116.3 75 76.0
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.9e-24 115.9 75 76.0
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 3.3e-24 115.2 75 74.7
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 3.3e-24 115.2 81 75.3
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 3.3e-24 115.2 76 77.6
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 3.3e-24 115.2 75 73.3
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 4.2e-24 114.8 75 72.0
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 5.5e-24 114.4 75 73.3
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 1.2e-23 113.2 75 72.0
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.2e-23 113.2 81 69.1
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 3.6e-23 111.7 81 66.7
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 3.6e-23 111.7 75 70.7
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 6.1e-23 110.9 75 69.3
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 8.0e-23 110.5 73 72.6
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 8.0e-23 110.5 75 69.3
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.4e-22 109.8 75 69.3
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 3.0e-22 108.6 74 68.9
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 4.0e-22 108.2 75 68.0
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 5.2e-22 107.8 77 68.8
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 8.9e-22 107.1 75 65.3
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 1.2e-21 106.7 78 62.8
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 2.0e-21 105.9 71 67.6
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 2.6e-21 105.5 73 69.9
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 2.6e-21 105.5 75 68.0
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 2.6e-21 105.5 75 68.0
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 4.4e-21 104.8 75 66.7
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 4.4e-21 104.8 75 66.7
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 7.5e-21 104.0 73 69.9
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 3.7e-20 101.7 81 59.3
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 8.3e-20 100.5 75 61.3
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.1e-19 100.1 78 59.0
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 5.4e-19 97.8 75 66.7
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 7.0e-19 97.4 75 61.3
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 4.5e-18 94.7 76 60.5
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.7e-17 92.8 68 69.1
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 2.9e-17 92.0 64 65.6
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 5.6e-16 87.8 72 51.4
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.2e-15 86.7 75 57.3
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.1e-15 85.9 75 57.3
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 5.2e-14 81.3 58 62.1
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 6.8e-14 80.9 72 56.9
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.0e-10 69.3 63 54.0
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 1.8e-06 56.2 41 68.3


User provided reference genes

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