Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G31196 Arabidopsis thaliana HOM05D001013 ORTHO05D015958 4.2e-19 97.1 50 100.0
AT3G04390 Arabidopsis thaliana HOM05D001013 ORTHO05D015958 5.3e-14 80.1 48 83.3
A09p01610 Brassica napus HOM05D001013 ORTHO05D004597 1.8e-06 55.1 42 76.2
BcaB01g02072 Brassica carinata HOM05D001013 ORTHO05D004597 3.1e-06 54.3 42 73.8
BcaC04g24043 Brassica carinata HOM05D001013 ORTHO05D004597 3.1e-06 54.3 42 73.8
C09p01710 Brassica napus HOM05D001013 ORTHO05D004597 3.1e-06 54.3 42 73.8
BolC9t53105H Brassica oleracea HOM05D001013 ORTHO05D004597 3.1e-06 54.3 42 73.8
BraA09t35819Z Brassica rapa HOM05D001013 ORTHO05D004597 3.1e-06 54.3 42 73.8
AL6G50970 Arabidopsis lyrata HOM05D001013 ORTHO05D004597 4.1e-06 53.9 42 73.8
A09p01640 Brassica napus HOM05D001013 ORTHO05D004597 4.1e-06 53.9 42 76.2
CARHR250380 Cardamine hirsuta HOM05D001013 ORTHO05D004597 4.1e-06 53.9 42 73.8
Aa31LG2G15640 Aethionema arabicum HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
AL7G16310 Arabidopsis lyrata HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
AT4G34890 Arabidopsis thaliana HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
BcaNung00646 Brassica carinata HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
A01p03620 Brassica napus HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
BolC1t00384H Brassica oleracea HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
BraA01t00348Z Brassica rapa HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
CARHR243170 Cardamine hirsuta HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
Ciclev10014051m.g Citrus clementina HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
Thhalv10024224m.g Eutrema salsugineum HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
Sp7g32650 Schrenkiella parvula HOM05D001013 ORTHO05D004597 7.0e-06 53.1 42 73.8
arahy.Tifrunner.gnm1.ann1.WY0JR2 Arachis hypogaea HOM05D005693 ORTHO05D015958 9.1e-06 52.8 49 61.2
ClCG03G013290 Citrullus lanatus HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
MELO3C015199.2 Cucumis melo HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
CsaV3_1G042760 Cucumis sativus L. HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
FvH4_3g29000 Fragaria vesca HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
FAN11G2909 Fragaria x ananassa HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
FAN21G2353 Fragaria x ananassa HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
FAN25G0972 Fragaria x ananassa HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
Gohir.A09G114800 Gossypium hirsutum HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
Gohir.D09G111500 Gossypium hirsutum HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
Gorai.006G129200 Gossypium raimondii HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
MD11G1161000 Malus domestica HOM05D001013 ORTHO05D004597 9.1e-06 52.8 36 80.6
MD11G1197900 Malus domestica HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
RcHm_v2.0_Chr5g0051661 Rosa chinensis HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
Sed0014521 Sechium edule HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
Hund22038 Selenicereus undatus HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4
TWI34G0448 Tripterygium wilfordii HOM05D001013 ORTHO05D004597 9.1e-06 52.8 42 71.4


User provided reference genes

Program Settings