Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 3.2e-220 768.1 375 100.0
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.8e-207 725.7 375 94.1
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 1.3e-189 666.4 375 86.1
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.0e-186 656.8 372 86.3
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 3.3e-185 651.7 373 84.2
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 1.3e-184 649.8 373 84.2
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 1.3e-184 649.8 372 84.7
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.6e-184 649.4 373 83.6
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 1.6e-184 649.4 373 83.9
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.1e-183 646.7 373 83.9
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 1.7e-181 639.4 374 83.4
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 6.3e-176 620.9 374 81.3
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 2.3e-170 602.4 372 79.8
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 1.6e-150 536.6 391 68.5
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 4.2e-140 501.9 391 67.5
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 6.4e-112 408.3 378 54.5
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 1.1e-111 407.5 385 54.5
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 5.4e-111 405.2 385 52.7
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 3.5e-110 402.5 387 54.0
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 6.0e-110 401.7 386 52.8
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.0e-109 401.0 386 53.1
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.3e-109 400.6 382 54.2
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 2.3e-109 399.8 384 53.1
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.9e-108 396.7 382 54.2
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.6e-107 393.7 384 53.1
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 4.7e-107 392.1 386 51.6
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.7e-104 383.6 396 50.8
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 2.2e-104 383.3 382 52.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 2.9e-104 382.9 386 50.8
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 1.9e-103 380.2 374 52.1
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.6e-102 375.6 386 52.6
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 4.6e-102 375.6 385 50.6
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 3.0e-101 372.9 389 50.1
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 3.9e-101 372.5 385 52.5
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 6.6e-101 371.7 385 52.2
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 1.1e-100 370.9 392 48.0
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 6.2e-99 365.2 386 48.4
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 1.7e-96 357.1 388 49.5
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.7e-96 357.1 386 48.7
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 1.7e-96 357.1 390 48.5
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 6.4e-96 355.1 385 48.1
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 2.4e-95 353.2 388 47.7
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 4.6e-94 349.0 380 49.2
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.3e-93 347.4 385 46.0
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 1.7e-93 347.1 386 47.9
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 2.3e-93 346.7 338 51.8
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 8.7e-93 344.7 462 42.4
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 1.5e-92 344.0 386 47.7
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 1.9e-92 343.6 391 47.8
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.9e-92 343.6 382 47.4
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 2.5e-92 343.2 386 47.4
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.1e-91 340.1 344 50.6
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 1.4e-90 337.4 386 46.9
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 2.4e-90 336.7 400 45.5
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 6.9e-90 335.1 379 46.7
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 1.2e-89 334.3 378 46.3
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.0e-89 333.6 336 51.5
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 9.9e-89 331.3 380 46.6
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.7e-88 330.5 386 46.6
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 1.7e-88 330.5 385 45.7
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 8.4e-88 328.2 378 45.8
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 7.1e-87 325.1 386 46.1
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 1.6e-86 323.9 388 46.1
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 4.6e-86 322.4 343 48.7
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.3e-85 320.9 387 43.9
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.3e-85 320.9 380 45.8
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 3.0e-85 319.7 380 45.3
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.9e-84 317.0 379 45.9
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.9e-84 317.0 382 46.3
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 2.5e-84 316.6 392 44.4
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 3.7e-83 312.8 418 41.9
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.7e-83 312.8 379 45.1
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 1.3e-80 304.3 380 43.7
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 8.4e-80 301.6 435 40.2
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 1.4e-79 300.8 388 43.3
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.4e-79 300.8 388 43.3
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.6e-78 297.4 392 43.1
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 7.9e-78 295.0 335 48.7
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 3.0e-77 293.1 339 48.7
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 5.1e-77 292.4 337 46.3
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.8e-75 286.6 386 41.5
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.1e-74 284.6 332 45.5
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.8e-74 283.9 389 40.1
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 7.9e-70 268.5 410 38.0
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.5e-68 263.5 301 47.8
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 3.7e-67 259.6 321 43.9
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 4.8e-67 259.2 337 42.7
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 6.9e-66 255.4 281 48.0
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 7.7e-65 251.9 308 44.5
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 8.5e-64 248.4 345 43.2
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 5.5e-63 245.7 263 46.0
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 7.9e-62 241.9 232 53.9
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 2.9e-56 223.4 331 38.4
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 1.7e-51 207.6 234 48.7
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 4.2e-47 193.0 229 42.4
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 8.8e-45 185.3 227 43.2
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 1.1e-42 178.3 292 35.3
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 4.4e-36 156.4 278 38.8
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 2.8e-35 153.7 384 30.2
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.4e-34 150.6 213 39.0
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 3.6e-30 136.7 213 39.4
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 1.5e-28 131.3 366 28.4
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 2.0e-20 104.4 70 68.6
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 8.0e-14 82.4 97 39.2
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.2e-12 78.6 169 32.5
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 2.0e-12 77.8 97 37.1


User provided reference genes

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