Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G08640 Arabidopsis thaliana HOM05D000278 ORTHO05D038558 4.6e-81 304.7 172 100.0
AL3G15140 Arabidopsis lyrata HOM05D001444 ORTHO05D003766 1.1e-31 140.6 170 49.4
A03p33480 Brassica napus HOM05D000278 ORTHO05D004031 5.9e-20 101.7 159 40.3
QL07p019694 Quercus lobata HOM05D000278 ORTHO05D004031 1.0e-19 100.9 159 40.3
BcaNung04528 Brassica carinata HOM05D000278 ORTHO05D004031 1.7e-19 100.1 159 40.3
AL3G13870 Arabidopsis lyrata HOM05D000278 ORTHO05D004031 3.8e-19 99.0 159 40.3
C03p40680 Brassica napus HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
BolC1t05791H Brassica oleracea HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
BolC1t05795H Brassica oleracea HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
BolC3t16333H Brassica oleracea HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
BraA01t04547Z Brassica rapa HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
BraA03t12523Z Brassica rapa HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
Sp3g02930 Schrenkiella parvula HOM05D000278 ORTHO05D004031 5.0e-19 98.6 159 39.6
AT3G03960 Arabidopsis thaliana HOM05D000278 ORTHO05D004031 6.5e-19 98.2 159 39.6
BraA05t23080Z Brassica rapa HOM05D000278 ORTHO05D004031 8.5e-19 97.8 159 39.0
BcaC05g29888 Brassica carinata HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.0
BcaC05g30297 Brassica carinata HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.0
A01p41240 Brassica napus HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.0
BNapus_Darmor_BZH_scaffold_78p00470 Brassica napus HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.0
C05p63100 Brassica napus HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.0
BolC5t34962H Brassica oleracea HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.0
Carub.0003s0321 Capsella rubella HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 40.3
Ca_04492_v3 Cicer arietinum L. HOM05D000278 ORTHO05D004031 1.1e-18 97.4 159 39.6
AL6G29410 Arabidopsis lyrata HOM05D000278 ORTHO05D004031 1.4e-18 97.1 159 37.7
CARHR078090 Cardamine hirsuta HOM05D000278 ORTHO05D004031 1.9e-18 96.7 159 39.0
Thhalv10020448m.g Eutrema salsugineum HOM05D000278 ORTHO05D004031 1.9e-18 96.7 159 39.0
SalBow8G1634 Salvia bowleyana HOM05D000278 ORTHO05D004031 2.5e-18 96.3 171 38.6
TPR.G36870 Trifolium pratense HOM05D000278 ORTHO05D004031 2.5e-18 96.3 162 37.7
Ciclev10019583m.g Citrus clementina HOM05D000278 ORTHO05D004031 3.2e-18 95.9 159 38.4
SalBow1G8202 Salvia bowleyana HOM05D000278 ORTHO05D004031 3.2e-18 95.9 159 39.0
A05p43400 Brassica napus HOM05D000278 ORTHO05D004031 4.2e-18 95.5 159 38.4
Psat0s2522g0160 Pisum sativum HOM05D000278 ORTHO05D004031 4.2e-18 95.5 159 37.7
Lj1g0028009 Lotus japonicus HOM05D000278 ORTHO05D004031 5.5e-18 95.1 159 38.4
MD17G1264600 Malus domestica HOM05D000278 ORTHO05D004031 5.5e-18 95.1 163 37.4
Nitab4.5_0002187g0060 Nicotiana tabacum HOM05D000278 ORTHO05D004031 5.5e-18 95.1 159 38.4
BcaC09g47768 Brassica carinata HOM05D000278 ORTHO05D004031 7.2e-18 94.7 159 39.0
Migut.C00324 Erythranthe guttata HOM05D000278 ORTHO05D004031 7.2e-18 94.7 162 37.7
QL07p030356 Quercus lobata HOM05D000278 ORTHO05D004031 7.2e-18 94.7 159 37.1
CDE01G0608 Ceratophyllum demersum HOM05D000278 ORTHO05D004031 9.4e-18 94.4 158 37.3
MELO3C026888.2 Cucumis melo HOM05D000278 ORTHO05D004031 9.4e-18 94.4 159 38.4
FvH4_6g27660 Fragaria vesca HOM05D000278 ORTHO05D004031 9.4e-18 94.4 160 38.8
FAN02G2614 Fragaria x ananassa HOM05D000278 ORTHO05D004031 9.4e-18 94.4 160 38.8
FAN05G2827 Fragaria x ananassa HOM05D000278 ORTHO05D004031 9.4e-18 94.4 160 38.8
FAN09G2390 Fragaria x ananassa HOM05D000278 ORTHO05D004031 9.4e-18 94.4 160 38.8
FAN14G1825 Fragaria x ananassa HOM05D000278 ORTHO05D004031 9.4e-18 94.4 160 38.8
Solyc01g088080.3 Solanum lycopersicum HOM05D000278 ORTHO05D004031 9.4e-18 94.4 159 37.7
Sopen01g034950 Solanum pennellii HOM05D000278 ORTHO05D004031 9.4e-18 94.4 159 37.7
Atru.chr2.1362 Acer truncatum HOM05D000278 ORTHO05D004031 1.2e-17 94.0 159 37.7
CAN.G410.8 Capsicum annuum HOM05D000278 ORTHO05D004031 1.2e-17 94.0 158 36.1
ClCG10G013350 Citrullus lanatus HOM05D000278 ORTHO05D004031 1.2e-17 94.0 159 38.4
Glyma.02G071900 Glycine max HOM05D000278 ORTHO05D004031 1.2e-17 94.0 159 39.0
Nitab4.5_0006695g0030 Nicotiana tabacum HOM05D000278 ORTHO05D004031 1.2e-17 94.0 159 37.7
Prupe.3G113600 Prunus persica HOM05D000278 ORTHO05D004031 1.2e-17 94.0 160 38.1
Prupe.3G114000 Prunus persica HOM05D000278 ORTHO05D004031 1.2e-17 94.0 160 38.1
QL07p030735 Quercus lobata HOM05D000278 ORTHO05D004031 1.2e-17 94.0 157 37.6
Sed0026355 Sechium edule HOM05D000278 ORTHO05D004031 1.2e-17 94.0 159 38.4
Cfa016437 Carpinus fangiana HOM05D000278 ORTHO05D004031 1.6e-17 93.6 159 37.7
CDE05G1661 Ceratophyllum demersum HOM05D000278 ORTHO05D004031 1.6e-17 93.6 158 36.7
Medtr6g032870 Medicago truncatula HOM05D000278 ORTHO05D004031 1.6e-17 93.6 159 37.1
Nn7g35821 Nelumbo nucifera HOM05D000278 ORTHO05D004031 1.6e-17 93.6 162 36.4
Psat0s3407g0040 Pisum sativum HOM05D000278 ORTHO05D004031 1.6e-17 93.6 162 36.4
PGSC0003DMG400006829 Solanum tuberosum HOM05D000278 ORTHO05D004031 1.6e-17 93.6 159 37.7
CANSAT25G3570 Cannabis sativa HOM05D000278 ORTHO05D004031 2.1e-17 93.2 159 38.4
Phvul.004G079800 Phaseolus vulgaris HOM05D000278 ORTHO05D004031 2.1e-17 93.2 159 37.7
SGA_v2.0_scaffold274G46518 Striga asiatica HOM05D000278 ORTHO05D004031 2.1e-17 93.2 170 37.6
Migut.J01891 Erythranthe guttata HOM05D000278 ORTHO05D004031 2.7e-17 92.8 162 37.7
VMungo0464G1078 Vigna mungo HOM05D000278 ORTHO05D004031 2.7e-17 92.8 159 37.7
AagrBONN_evm.TU.Sc2ySwM_117.3360 Anthoceros agrestis HOM05D000278 ORTHO05D004031 3.6e-17 92.4 158 37.3
Haze_19414 Corylus avellana HOM05D000278 ORTHO05D004031 3.6e-17 92.4 159 37.1
Glyma.16G153200 Glycine max HOM05D000278 ORTHO05D004031 3.6e-17 92.4 159 39.0
MD09G1235600 Malus domestica HOM05D000278 ORTHO05D004031 3.6e-17 92.4 160 37.5
RcHm_v2.0_Chr2g0130701 Rosa chinensis HOM05D000278 ORTHO05D004031 3.6e-17 92.4 160 37.5
Aa31LG5G14540 Aethionema arabicum HOM05D000278 ORTHO05D004031 4.7e-17 92.0 159 37.7
CsaV3_3G043280 Cucumis sativus L. HOM05D000278 ORTHO05D004031 4.7e-17 92.0 159 37.7
Dinv14581 Davidia involucrata HOM05D000278 ORTHO05D004031 4.7e-17 92.0 159 37.1
Dinv37012 Davidia involucrata HOM05D000278 ORTHO05D004031 4.7e-17 92.0 159 37.1
MD17G1264300 Malus domestica HOM05D000278 ORTHO05D004031 4.7e-17 92.0 160 37.5
Peaxi162Scf00071g00913 Petunia axillaris HOM05D000278 ORTHO05D004031 4.7e-17 92.0 158 36.7
Zm00001eb200400 Zea mays HOM05D000278 ORTHO05D004031 4.7e-17 92.0 158 36.7
ATR0697G160 Amborella trichopoda HOM05D000278 ORTHO05D004031 6.1e-17 91.7 162 36.4
Ca_25711_v3 Cicer arietinum L. HOM05D000278 ORTHO05D004031 7.9e-17 91.3 162 35.8
Hma1.2p1_1145F.1_g261380 Hydrangea macrophylla HOM05D000278 ORTHO05D004031 7.9e-17 91.3 162 37.7
Manes.08G143700 Manihot esculenta HOM05D000278 ORTHO05D004031 7.9e-17 91.3 159 37.7
THA.LOC104820734 Tarenaya hassleriana HOM05D000278 ORTHO05D004031 7.9e-17 91.3 159 36.5
GSVIVG01033394001 Vitis vinifera HOM05D000278 ORTHO05D004031 7.9e-17 91.3 162 36.4
Lj1A1137T80 Lonicera japonica HOM05D000278 ORTHO05D004031 1.0e-16 90.9 159 36.5
Manes.09G141800 Manihot esculenta HOM05D000278 ORTHO05D004031 1.0e-16 90.9 170 35.9
TPR.G34618 Trifolium pratense HOM05D000278 ORTHO05D004031 1.0e-16 90.9 162 35.2
TWI32G0619 Tripterygium wilfordii HOM05D000278 ORTHO05D004031 1.0e-16 90.9 159 37.7
TAR369G0685 Trochodendron aralioides HOM05D000278 ORTHO05D004031 1.0e-16 90.9 159 36.5
CiPaw.06G089700 Carya illinoinensis HOM05D000278 ORTHO05D004031 1.4e-16 90.5 159 37.1
CiPaw.09G001600 Carya illinoinensis HOM05D000278 ORTHO05D004031 1.4e-16 90.5 159 37.1
Lalb_Chr21g0316131 Lupinus albus HOM05D000278 ORTHO05D004031 1.4e-16 90.5 159 37.1
Lalb_Chr21g0316151 Lupinus albus HOM05D000278 ORTHO05D004031 1.4e-16 90.5 159 37.1
TWI34G1951 Tripterygium wilfordii HOM05D000278 ORTHO05D004031 1.4e-16 90.5 158 36.7
MSTRG.26066 Avicennia marina HOM05D000278 ORTHO05D004031 1.8e-16 90.1 171 36.8
Eucgr.A02095 Eucalyptus grandis HOM05D000278 ORTHO05D004031 1.8e-16 90.1 159 36.5
Medtr1g030650 Medicago truncatula HOM05D000278 ORTHO05D004031 1.8e-16 90.1 162 35.2
Os03g0804800 Oryza sativa ssp. japonica HOM05D000278 ORTHO05D004031 1.8e-16 90.1 159 36.5
Rhsim03G0001500 Rhododendron simsii HOM05D000278 ORTHO05D004031 2.3e-16 89.7 159 36.5
Hund19239 Selenicereus undatus HOM05D000278 ORTHO05D004031 2.3e-16 89.7 159 35.8
Aqoxy2G00582 Aquilegia oxysepala HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 35.2
CSS0000727 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 36.5
CSS0033021 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 36.5
CSS0036387 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 36.5
Lj8A582T9 Lonicera japonica HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 36.5
PGR142G1170 Punica granatum HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 36.5
THA.LOC104802866 Tarenaya hassleriana HOM05D000278 ORTHO05D004031 3.0e-16 89.4 159 36.5
Cc06_g22900 Coffea canephora HOM05D000278 ORTHO05D004031 3.9e-16 89.0 159 36.5
Pp3c15_13410 Physcomitrium patens HOM05D000278 ORTHO05D004031 3.9e-16 89.0 162 36.4
Pp3c15_13420 Physcomitrium patens HOM05D000278 ORTHO05D004031 3.9e-16 89.0 162 36.4
Ah.13g075330 Amaranthus hybridus HOM05D000278 ORTHO05D004031 5.1e-16 88.6 176 33.5
MSTRG.10861 Avicennia marina HOM05D000278 ORTHO05D004031 5.1e-16 88.6 164 36.6
Rhsim01G0190500 Rhododendron simsii HOM05D000278 ORTHO05D004031 5.1e-16 88.6 159 35.8
Sc13g0002700 Simmondsia chinensis HOM05D000278 ORTHO05D004031 5.1e-16 88.6 162 35.2
Sabra19G0042100 Salix brachista HOM05D000278 ORTHO05D004031 6.7e-16 88.2 159 35.8
EL10Ac3g06816 Beta vulgaris HOM05D000278 ORTHO05D004031 8.8e-16 87.8 156 34.0
PSO339G2052 Papaver somniferum HOM05D000278 ORTHO05D004031 8.8e-16 87.8 162 35.2
Potri.019G034200 Populus trichocarpa HOM05D000278 ORTHO05D004031 8.8e-16 87.8 159 35.8
unitig_899.g15071 Utricularia gibba HOM05D000861 ORTHO05D004031 8.8e-16 87.8 159 35.2
vmacro12568 Vaccinium macrocarpon HOM05D000278 ORTHO05D004031 8.8e-16 87.8 159 36.5
TAR623G0935 Trochodendron aralioides HOM05D000278 ORTHO05D004031 1.1e-15 87.4 159 35.2
COL.COLO4_13606 Corchorus olitorius HOM05D000278 ORTHO05D004031 1.5e-15 87.0 159 35.8
ECA232G4643 Erigeron canadensis HOM05D000278 ORTHO05D004031 1.5e-15 87.0 163 35.0
HanXRQChr08g0227471 Helianthus annuus HOM05D000278 ORTHO05D004031 1.5e-15 87.0 160 35.0
Duzib177G1081 Durio zibethinus HOM05D000278 ORTHO05D004031 2.0e-15 86.7 159 35.8
Sabra13G0052100 Salix brachista HOM05D000278 ORTHO05D004031 2.6e-15 86.3 161 34.2
PSO384G2052 Papaver somniferum HOM05D000278 ORTHO05D004031 3.3e-15 85.9 162 34.0
DCAR_019879 Daucus carota HOM05D000278 ORTHO05D004031 5.7e-15 85.1 147 34.7
Lsat_1_v5_gn_4_42920 Lactuca sativa HOM05D000278 ORTHO05D004031 9.7e-15 84.3 162 34.6
CSS0002970 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004031 1.3e-14 84.0 156 34.6
Potri.013G058500 Populus trichocarpa HOM05D000278 ORTHO05D004031 1.3e-14 84.0 162 34.6
Thecc.05G294000 Theobroma cacao HOM05D000278 ORTHO05D004031 2.2e-14 83.2 159 34.0
Gohir.A11G258900 Gossypium hirsutum HOM05D000278 ORTHO05D004031 2.8e-14 82.8 159 34.0
Gohir.D11G269000 Gossypium hirsutum HOM05D000278 ORTHO05D004031 2.8e-14 82.8 159 34.0
Gorai.007G288800 Gossypium raimondii HOM05D000278 ORTHO05D004031 2.8e-14 82.8 159 34.0
Mapoly0052s0054 Marchantia polymorpha HOM05D000278 ORTHO05D004031 3.7e-14 82.4 161 34.2
Duzib106G1656 Durio zibethinus HOM05D000278 ORTHO05D004031 4.8e-14 82.0 159 34.0
AUR62032060 Chenopodium quinoa HOM05D000278 ORTHO05D004031 6.3e-14 81.6 186 30.6
Gohir.D11G310200 Gossypium hirsutum HOM05D000278 ORTHO05D004031 8.2e-14 81.3 162 33.3
Gorai.007G343600 Gossypium raimondii HOM05D000278 ORTHO05D004031 8.2e-14 81.3 162 33.3
Sed0013215 Sechium edule HOM05D000278 ORTHO05D004031 8.2e-14 81.3 168 35.1
SMO353G0351 Selaginella moellendorffii HOM05D000278 ORTHO05D004031 1.1e-13 80.9 158 31.6
CBR_g26488 Chara braunii HOM05D000278 ORTHO05D004031 2.4e-13 79.7 159 32.7
Gohir.A11G296700 Gossypium hirsutum HOM05D000278 ORTHO05D004031 2.4e-13 79.7 162 32.7
PRCOL_00000219 Prasinoderma coloniale HOM05D000278 ORTHO05D004031 5.3e-13 78.6 169 32.5
BcaC07g40580 Brassica carinata HOM05D000278 ORTHO05D004031 9.1e-13 77.8 110 41.8
Gohir.D11G312410 Gossypium hirsutum HOM05D000278 ORTHO05D004031 1.5e-12 77.0 162 32.1
Oeu012404.4 Olea europaea HOM05D000278 ORTHO05D004031 4.5e-12 75.5 186 31.2
Actinidia22085 Actinidia chinensis HOM05D000278 ORTHO05D004031 7.7e-12 74.7 134 34.3
HPP92_017517 Vanilla planifolia HOM05D000278 ORTHO05D004031 3.8e-11 72.4 92 41.3
AUR62032687 Chenopodium quinoa HOM05D000278 ORTHO05D004031 5.0e-11 72.0 92 41.3
Cre03.g168450 Chlamydomonas reinhardtii HOM05D000278 ORTHO05D004031 1.1e-10 70.9 159 32.7
EL10Ac5g12659 Beta vulgaris HOM05D000278 ORTHO05D004031 1.4e-10 70.5 207 27.1
BcaC05g30238 Brassica carinata HOM05D000278 ORTHO05D004031 3.2e-10 69.3 160 34.4
Rhsim03G0008300 Rhododendron simsii HOM05D000278 ORTHO05D004031 4.2e-10 68.9 92 39.1
MCO11G566 Micromonas commoda HOM05D000278 ORTHO05D004031 7.2e-10 68.2 162 30.2
Aa31sc26G80 Aethionema arabicum HOM05D000278 ORTHO05D004031 2.3e-08 63.2 132 33.3
Haze_26940 Corylus avellana HOM05D000278 ORTHO05D004031 2.3e-08 63.2 162 27.2
Cc02_g37620 Coffea canephora HOM05D000278 ORTHO05D004031 3.0e-08 62.8 92 40.2
AL2G23870 Arabidopsis lyrata HOM05D001444 ORTHO05D038558 3.9e-08 62.4 46 60.9


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