Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 3.3e-144 515.0 257 100.0
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 2.0e-128 462.6 251 88.4
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.0e-121 440.3 255 85.9
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 5.2e-121 438.0 250 86.4
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 8.8e-121 437.2 250 86.4
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 7.5e-120 434.1 254 83.9
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.3e-119 433.3 253 85.0
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 3.1e-118 428.7 243 86.4
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 7.2e-107 391.0 249 79.5
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.3e-103 380.2 258 74.8
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 5.0e-92 341.7 219 77.6
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 2.8e-90 335.9 221 71.0
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 2.2e-87 326.2 245 65.7
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 8.3e-87 324.3 248 64.9
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 3.5e-85 318.9 204 73.5
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 7.8e-85 317.8 206 73.3
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 2.3e-84 316.2 228 65.8
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 2.3e-84 316.2 208 72.1
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.5e-83 313.5 217 68.7
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.9e-83 313.2 245 62.4
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 2.5e-83 312.8 218 69.3
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 5.6e-83 311.6 197 74.1
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 7.3e-83 311.2 206 70.4
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.2e-82 310.5 249 61.8
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.2e-82 310.5 249 61.8
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 2.1e-82 309.7 211 69.2
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 2.8e-82 309.3 222 67.6
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.4e-81 307.0 242 63.2
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 1.8e-81 306.6 220 65.5
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 5.2e-81 305.1 204 72.5
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 6.8e-81 304.7 207 71.0
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.5e-80 303.5 244 63.1
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 1.5e-80 303.5 212 66.5
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 2.6e-80 302.8 249 60.6
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 5.8e-80 301.6 224 63.4
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 7.5e-80 301.2 264 59.8
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.7e-79 300.1 213 69.0
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 1.7e-79 300.1 216 66.2
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 1.7e-79 300.1 210 66.2
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 3.7e-79 298.9 214 65.9
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 4.9e-79 298.5 211 68.2
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 6.4e-79 298.1 225 64.0
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.1e-78 297.4 210 64.8
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.1e-78 297.4 239 62.8
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 2.4e-78 296.2 213 67.6
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 4.1e-78 295.4 243 60.1
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 7.1e-78 294.7 218 65.6
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 7.1e-78 294.7 214 67.8
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.2e-77 293.9 218 64.7
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 3.5e-77 292.4 225 64.4
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 4.6e-77 292.0 209 64.1
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 5.1e-76 288.5 203 67.0
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.1e-75 287.3 219 62.1
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.1e-75 287.3 233 62.7
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 2.5e-75 286.2 209 66.0
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 5.6e-75 285.0 216 63.4
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.6e-74 283.5 216 63.9
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.1e-74 283.1 236 63.1
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 3.6e-74 282.3 193 69.4
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 4.7e-74 282.0 235 60.9
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 1.1e-73 280.8 190 70.0
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 1.1e-73 280.8 198 67.2
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 3.1e-73 279.3 201 65.7
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 3.4e-72 275.8 214 64.0
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 7.6e-72 274.6 206 65.0
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 3.8e-71 272.3 181 71.8
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 7.1e-70 268.1 188 69.7
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.1e-69 266.5 205 64.9
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 5.2e-65 251.9 258 54.3
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 4.4e-64 248.8 182 68.7
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 8.4e-63 244.6 240 52.9
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.8e-58 229.6 197 62.4
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 2.8e-58 229.6 206 57.3
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 7.6e-56 221.5 195 55.9
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.7e-55 220.3 134 82.1
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 8.4e-55 218.0 242 49.2
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 9.3e-54 214.5 161 60.2
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 7.9e-53 211.5 209 51.2
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 1.3e-52 210.7 189 56.6
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 2.1e-50 203.4 187 54.5
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 2.0e-48 196.8 98 91.8
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.2e-46 189.1 132 68.2
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 7.1e-46 188.3 118 72.0
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 7.1e-46 188.3 167 58.7
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.0e-44 184.5 208 47.1
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.3e-44 183.3 239 44.8
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.6e-40 169.9 94 87.2
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.0e-36 157.9 121 65.3
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 3.3e-35 152.9 172 49.4
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 3.8e-31 139.4 113 62.8
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.5e-30 136.7 85 70.6
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.6e-29 132.5 107 63.6
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.1e-25 121.3 141 50.4
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 4.6e-21 105.9 196 37.2
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 4.8e-10 69.3 65 55.4
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 7.2e-06 55.5 166 28.3


User provided reference genes

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