Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G00651 Arabidopsis thaliana HOM05D002348 ORTHO05D081009 4.2e-44 181.0 96 100.0
AL8G25350 Arabidopsis lyrata HOM05D002348 ORTHO05D002512 1.2e-22 109.8 78 75.6
AT5G51100 Arabidopsis thaliana HOM05D002348 ORTHO05D002512 1.6e-22 109.4 78 76.9
Carub.0008s1114 Capsella rubella HOM05D002348 ORTHO05D002512 6.6e-21 104.0 78 71.8
Thhalv10014192m.g Eutrema salsugineum HOM05D002348 ORTHO05D002512 8.6e-21 103.6 78 71.8
CARHR256990 Cardamine hirsuta HOM05D002348 ORTHO05D002512 3.3e-20 101.7 78 71.8
A10p07990 Brassica napus HOM05D002348 ORTHO05D002512 1.8e-18 95.9 61 85.2
Sp6g13290 Schrenkiella parvula HOM05D002348 ORTHO05D002512 2.3e-18 95.5 78 67.9
BraA03t10926Z Brassica rapa HOM05D000021 ORTHO05D000010 3.1e-18 95.1 58 89.7
Aa31LG3G7590 Aethionema arabicum HOM05D002348 ORTHO05D002512 1.2e-17 93.2 78 64.1
A03p16360 Brassica napus HOM05D002348 ORTHO05D002512 2.0e-17 92.4 75 68.0
BcaB08g35466 Brassica carinata HOM05D002348 ORTHO05D002512 3.4e-17 91.7 78 67.9
BcaC01g06106 Brassica carinata HOM05D002348 ORTHO05D002512 1.3e-16 89.7 78 65.4
BcaC01g06070 Brassica carinata HOM05D002348 ORTHO05D002512 2.2e-16 89.0 75 66.7
BolC3t14310H Brassica oleracea HOM05D002348 ORTHO05D002512 2.2e-16 89.0 75 66.7
C03p19240 Brassica napus HOM05D002348 ORTHO05D002512 2.9e-16 88.6 58 84.5
BraA03t10925Z Brassica rapa HOM05D002348 ORTHO05D002512 8.3e-16 87.0 75 64.0
TAR629G3415 Trochodendron aralioides HOM05D002348 ORTHO05D002512 1.1e-07 60.1 69 56.5


User provided reference genes

Program Settings