Gene: Carub.0008s1114
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0008s1114
- Transcript Identifier Carub.0008s1114.1
- Gene Type Coding gene
- Location scaffold_8 : 6759790-6762076 : negative
Gene Family Information
- ID HOM05D002348
- #Genes/#Species 289/96
- Phylogenetic origin
- ID ORTHO05D002512
- #Genes/#Species 283/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0008s1114.v1.1
- pacid 39252978
- synonym Carubv10026846m.g
Descriptions
- Description PTHR11404//PTHR11404:SF24 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006801 | IEA | InterPro | superoxide metabolic process | |
| GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT5G51100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004784 | IEA | InterPro | superoxide dismutase activity | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G51100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G51100 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT5G51100 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT5G51100 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily |
| IPR019831 | Manganese/iron superoxide dismutase, N-terminal |
| IPR036324 | Manganese/iron superoxide dismutase, N-terminal domain superfamily |
| IPR019832 | Manganese/iron superoxide dismutase, C-terminal |
| IPR001189 | Manganese/iron superoxide dismutase |
| Mapman id | Description |
|---|---|
| 10.2.1.1 | Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.iron superoxide dismutase (FSD) |
| 15.6.1.2.2.9 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP9/FSD2 |