Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G30370 Arabidopsis thaliana HOM05D008420 ORTHO05D009795 5.6e-98 360.9 180 100.0
AL2G13960 Arabidopsis lyrata HOM05D008420 ORTHO05D009795 6.5e-70 267.7 160 75.6
AL6G32670 Arabidopsis lyrata HOM05D008420 ORTHO05D009795 4.4e-50 201.8 123 77.2
Aa31LG4G11800 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.9e-39 164.9 167 49.1
Aa31sc24G120 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.9e-39 164.9 167 46.7
Aa31csc22G160 Aethionema arabicum HOM05D000017 ORTHO05D000013 1.3e-38 163.7 167 46.1
Aa31LG9G7060 Aethionema arabicum HOM05D000017 ORTHO05D000013 1.3e-38 163.7 167 46.1
BolC1t02098H Brassica oleracea HOM05D008420 ORTHO05D009795 8.0e-36 154.5 125 56.8
BolC1t02099H Brassica oleracea HOM05D008420 ORTHO05D009795 8.0e-36 154.5 125 56.8
Aa31sc26G100 Aethionema arabicum HOM05D008420 ORTHO05D009795 1.0e-35 154.1 178 45.5
Aa31LG7G12240 Aethionema arabicum HOM05D000017 ORTHO05D009795 4.8e-33 145.2 162 43.8
Aa31sc376G20 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.2e-31 140.6 166 41.0
Aa31sc53G90 Aethionema arabicum HOM05D000017 ORTHO05D009795 4.5e-31 138.7 165 41.8
Aa31LG11G8300 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.9e-31 138.3 144 49.3
Aa31LG3G5220 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.9e-31 138.3 171 39.2
Aa31LG9G5040 Aethionema arabicum HOM05D000017 ORTHO05D009795 2.3e-30 136.3 166 41.0
Aa31LG3G5940 Aethionema arabicum HOM05D000017 ORTHO05D009795 6.5e-30 134.8 171 43.3
Aa31sc107G50 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.1e-29 134.0 153 42.5
AT1G18050 Arabidopsis thaliana HOM05D008420 ORTHO05D009795 1.1e-29 134.0 96 69.8
Aa31LG2G16800 Aethionema arabicum HOM05D008420 ORTHO05D009795 8.0e-28 127.9 152 42.1
Aa31LG8G12430 Aethionema arabicum HOM05D000017 ORTHO05D009795 6.8e-27 124.8 150 40.0
Aa31LG6G10560 Aethionema arabicum HOM05D000017 ORTHO05D000013 3.7e-25 119.0 143 41.3
Thhalv10011148m.g Eutrema salsugineum HOM05D008420 ORTHO05D009795 4.9e-25 118.6 151 41.1
Aa31LG9G5120 Aethionema arabicum HOM05D000017 ORTHO05D009795 3.1e-24 115.9 106 46.2
Aa31sc1125G30 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.6e-23 113.6 150 43.3
Carub.0027s0003 Capsella rubella HOM05D000977 ORTHO05D001094 4.5e-23 112.1 105 49.5
Sp5g19390 Schrenkiella parvula HOM05D008420 ORTHO05D009795 1.0e-22 110.9 139 38.1
BolC5t32252H Brassica oleracea HOM05D008420 ORTHO05D009795 8.6e-22 107.8 147 38.1
Sp2g07510 Schrenkiella parvula HOM05D008420 ORTHO05D015376 1.5e-21 107.1 151 38.4
Aa31sc57G40 Aethionema arabicum HOM05D000017 ORTHO05D009795 2.2e-17 93.2 160 33.8
Aa31LG1G8050 Aethionema arabicum HOM05D000017 ORTHO05D000013 3.7e-17 92.4 149 31.5
Aa31sc110G30 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.4e-16 90.5 125 40.8
Aa31LG1G1520 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.8e-16 90.1 131 41.2
Aa31sc200G10 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.8e-16 90.1 118 46.6
AT5G15685 Arabidopsis thaliana HOM05D000017 ORTHO05D000013 9.2e-16 87.8 147 34.7
Aa31sc119G30 Aethionema arabicum HOM05D000017 ORTHO05D009795 3.5e-15 85.9 60 50.0
Aa31sc14G20 Aethionema arabicum HOM05D000017 ORTHO05D009795 4.6e-15 85.5 118 39.8
Aa31sc364G20 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.9e-15 85.1 156 33.3
Aa31sc29G10 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.7e-14 83.6 150 30.0
Aa31sc63G50 Aethionema arabicum HOM05D000017 ORTHO05D009795 3.0e-14 82.8 113 39.8
CARHR218510 Cardamine hirsuta HOM05D008420 ORTHO05D009795 3.0e-14 82.8 69 56.5
Aa31LG8G10710 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.1e-13 80.9 102 44.1
Sp5g15340 Schrenkiella parvula HOM05D009848 ORTHO05D011321 1.1e-13 80.9 136 34.6
Thhalv10022508m.g Eutrema salsugineum HOM05D008420 ORTHO05D009795 3.3e-13 79.3 124 41.1
Aa31LG8G12590 Aethionema arabicum HOM05D000017 ORTHO05D009795 1.2e-12 77.4 107 43.9
SpUn0117_0030 Schrenkiella parvula HOM05D008420 ORTHO05D009795 1.2e-12 77.4 120 38.3
Sp3g25190 Schrenkiella parvula HOM05D008420 ORTHO05D009795 1.6e-12 77.0 111 41.4
Sp3g32500 Schrenkiella parvula HOM05D008420 ORTHO05D009795 2.8e-12 76.3 88 42.0
Sp5g19960 Schrenkiella parvula HOM05D008420 ORTHO05D009795 3.6e-12 75.9 77 42.9
Sp6g08490 Schrenkiella parvula HOM05D008420 ORTHO05D009795 4.7e-12 75.5 93 44.1
Aa31sc586G40 Aethionema arabicum HOM05D000017 ORTHO05D009795 6.8e-11 71.6 113 35.4
BolC3t19522H Brassica oleracea HOM05D000017 ORTHO05D000013 3.4e-10 69.3 172 32.6
Thhalv10023887m.g Eutrema salsugineum HOM05D008420 ORTHO05D009795 2.9e-09 66.2 99 40.4
A04p20160 Brassica napus HOM05D000017 ORTHO05D000013 3.7e-09 65.9 150 34.7
BolC2t08305H Brassica oleracea HOM05D011769 ORTHO05D000013 1.1e-08 64.3 145 32.4
Thhalv10026773m.g Eutrema salsugineum HOM05D009848 ORTHO05D011321 1.1e-08 64.3 140 30.0
Thhalv10019515m.g Eutrema salsugineum HOM05D008420 ORTHO05D009795 1.4e-08 63.9 91 42.9
THA.LOC104808850 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.2e-08 62.8 158 31.6
Sp5g16050 Schrenkiella parvula HOM05D008420 ORTHO05D009795 1.2e-07 60.8 147 27.9
Sp6g07940 Schrenkiella parvula HOM05D011769 ORTHO05D000065 2.0e-07 60.1 153 30.7
Rhsim01G0063200 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.0e-06 56.2 74 33.8
Aa31csc509G20 Aethionema arabicum HOM05D000017 ORTHO05D009795 5.0e-06 55.5 93 38.7


User provided reference genes

Program Settings