Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 4.4e-184 648.7 585 100.0
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 3.3e-171 605.9 585 95.9
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 1.2e-165 587.4 585 94.5
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 5.8e-160 568.5 587 86.5
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 1.2e-157 560.8 585 92.0
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 7.8e-157 558.1 587 89.6
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 8.9e-153 544.7 584 88.9
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 5.8e-152 542.0 590 88.3
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 1.1e-145 521.2 590 86.8
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 7.8e-141 505.0 563 87.9
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 2.2e-135 486.9 562 87.4
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 5.3e-129 465.7 644 75.0
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 1.9e-126 457.2 585 81.7
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 3.9e-116 422.9 583 75.5
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.3e-114 417.9 585 75.4
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 3.1e-113 413.3 585 77.4
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 5.8e-112 409.1 585 77.1
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 5.8e-112 409.1 585 74.7
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 2.9e-111 406.8 518 88.0
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 2.7e-109 400.2 585 74.2
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 1.3e-108 397.9 585 75.2
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 8.2e-106 388.7 585 74.5
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 6.9e-105 385.6 585 73.7
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.5e-104 384.4 581 75.0
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 3.4e-104 383.3 581 73.1
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 2.9e-103 380.2 583 73.4
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 3.6e-101 373.2 582 67.7
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 4.6e-101 372.9 587 70.4
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 5.7e-99 365.9 583 72.7
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 2.2e-98 364.0 581 74.9
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 5.3e-97 359.4 581 65.2
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 2.0e-96 357.5 585 69.2
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 2.6e-96 357.1 591 68.9
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 5.9e-96 355.9 581 70.7
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 3.2e-94 350.1 655 61.1
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 5.5e-94 349.4 588 67.3
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 3.9e-92 343.2 583 70.2
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 5.1e-92 342.8 509 77.2
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 1.1e-91 341.7 585 70.1
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 4.4e-91 339.7 585 68.0
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 9.7e-91 338.6 591 68.4
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 3.1e-89 333.6 583 67.4
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.5e-88 331.3 583 53.3
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 2.2e-87 327.4 585 72.6
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 1.1e-86 325.1 585 66.2
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 4.2e-86 323.2 585 68.2
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 7.2e-86 322.4 505 72.3
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.6e-85 321.2 574 58.4
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 1.6e-85 321.2 600 66.0
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 3.0e-84 317.0 585 66.7
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 3.9e-84 316.6 581 69.2
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 8.8e-84 315.5 585 67.4
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 1.5e-83 314.7 585 69.2
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 1.5e-83 314.7 585 71.8
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 2.2e-82 310.8 585 66.2
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 3.7e-82 310.1 593 63.1
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 9.1e-81 305.4 585 66.8
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 5.9e-80 302.8 583 67.2
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 1.1e-78 298.5 583 65.4
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 1.1e-78 298.5 509 69.7
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 3.2e-78 297.0 534 69.5
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 9.4e-78 295.4 585 67.2
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 1.6e-77 294.7 585 67.2
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 3.6e-77 293.5 589 55.5
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 8.8e-76 288.9 582 66.3
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 2.0e-75 287.7 564 68.3
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 4.4e-75 286.6 454 77.8
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 7.5e-75 285.8 583 65.2
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 1.4e-73 281.6 319 60.2
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 3.1e-73 280.4 602 64.5
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.2e-72 278.5 314 62.1
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 2.0e-72 277.7 564 71.8
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 3.5e-72 276.9 556 62.1
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 4.5e-72 276.6 630 62.4
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 1.3e-71 275.0 514 57.4
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 8.5e-71 272.3 585 63.9
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 1.1e-70 271.9 592 61.0
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 4.2e-70 270.0 598 57.9
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 5.5e-70 269.6 582 64.8
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 2.7e-69 267.3 685 57.4
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.0e-68 265.4 582 64.3
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 1.4e-68 265.0 586 64.5
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 2.3e-68 264.2 596 57.2
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 4.0e-68 263.5 587 62.9
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 4.4e-67 260.0 585 60.2
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 1.7e-66 258.1 409 61.6
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 8.3e-66 255.8 592 62.7
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 1.6e-64 251.5 584 65.1
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 1.0e-63 248.8 558 58.4
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 5.0e-63 246.5 584 60.8
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 8.6e-63 245.7 328 65.2
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 2.1e-61 241.1 409 59.2
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 1.4e-60 238.4 562 63.7
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 1.2e-59 235.3 583 62.1
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 1.5e-59 235.0 562 58.4
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 2.0e-59 234.6 594 58.1
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 7.5e-59 232.6 586 61.8
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 3.2e-57 227.3 588 60.9
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 6.6e-55 219.5 301 54.5
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 9.5e-54 215.7 559 38.1
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 8.3e-50 202.6 542 60.5
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 3.5e-48 197.2 584 59.8
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 5.8e-43 179.9 223 57.0
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 3.7e-34 150.6 198 59.1
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 3.0e-31 141.0 146 54.1
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 3.8e-26 124.0 120 66.7
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 1.9e-22 111.7 244 32.8
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 3.3e-22 110.9 75 68.0
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 4.3e-22 110.5 75 69.3
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 4.3e-22 110.5 75 69.3
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 1.3e-21 109.0 75 68.0
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 2.8e-21 107.8 75 68.0
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 6.2e-21 106.7 144 61.1
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 6.2e-21 106.7 144 61.1
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 6.2e-21 106.7 144 61.1
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 5.3e-20 103.6 98 57.1
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 1.6e-16 92.0 101 76.2
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 7.3e-14 83.2 60 61.7
Sc13g0008670 Simmondsia chinensis HOM05D006220 ORTHO05D007590 1.6e-13 82.0 97 75.3
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 4.8e-13 80.5 40 97.5
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 4.0e-12 77.4 75 48.0
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 6.9e-12 76.6 150 38.7
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 9.0e-12 76.3 53 67.9
Atru.chr2.2722 Acer truncatum HOM05D006220 ORTHO05D017154 1.5e-11 75.5 116 44.0
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 4.5e-11 73.9 237 42.6
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 9.3e-09 66.2 119 37.0
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 1.2e-08 65.9 301 28.9


User provided reference genes

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