Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G08740 Arabidopsis thaliana HOM05D005727 ORTHO05D007324 1.2e-132 476.5 237 100.0
AL3G19740 Arabidopsis lyrata HOM05D005727 ORTHO05D007324 1.8e-128 462.6 237 97.9
Carub.0003s0787 Capsella rubella HOM05D005727 ORTHO05D007324 4.5e-119 431.4 239 90.8
CARHR083040 Cardamine hirsuta HOM05D005727 ORTHO05D007324 1.2e-111 406.8 242 86.4
Sp3g07170 Schrenkiella parvula HOM05D005727 ORTHO05D007324 2.6e-111 405.6 237 86.1
BcaC05g29610 Brassica carinata HOM05D005727 ORTHO05D007324 1.3e-110 403.3 239 84.9
C05p59120 Brassica napus HOM05D005727 ORTHO05D007324 1.3e-110 403.3 239 84.9
BolC5t34584H Brassica oleracea HOM05D005727 ORTHO05D007324 1.3e-110 403.3 239 85.4
A05p40060 Brassica napus HOM05D005727 ORTHO05D007324 2.2e-110 402.5 239 84.9
Thhalv10022392m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 8.7e-107 390.6 242 81.8
Thhalv10023841m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 3.3e-106 388.7 242 81.8
THA.LOC104823320 Tarenaya hassleriana HOM05D005727 ORTHO05D007324 3.9e-99 365.2 237 78.1
Thhalv10014581m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 2.5e-98 362.5 230 79.1
Aa31LG5G18760 Aethionema arabicum HOM05D005727 ORTHO05D007324 3.3e-98 362.1 237 79.7
Sp6g41120 Schrenkiella parvula HOM05D005727 ORTHO05D007324 7.7e-95 350.9 244 74.2
BcaNung03307 Brassica carinata HOM05D005727 ORTHO05D007324 1.0e-94 350.5 226 75.2
C09p74740 Brassica napus HOM05D005727 ORTHO05D007324 3.6e-92 342.0 186 85.5
BolC3t14633H Brassica oleracea HOM05D005727 ORTHO05D007324 4.6e-92 341.7 186 84.9
Atru.chr8.117 Acer truncatum HOM05D005727 ORTHO05D007324 1.0e-91 340.5 237 70.9
BcaNung03303 Brassica carinata HOM05D005727 ORTHO05D007324 1.0e-91 340.5 186 84.9
BcaC06g31951 Brassica carinata HOM05D005727 ORTHO05D007324 1.4e-91 340.1 186 84.9
A10p33800 Brassica napus HOM05D005727 ORTHO05D007324 3.0e-91 339.0 186 84.9
BraA10t45408Z Brassica rapa HOM05D005727 ORTHO05D007324 2.0e-90 336.3 186 83.9
TAR267G0001 Trochodendron aralioides HOM05D005727 ORTHO05D007324 1.7e-89 333.2 238 71.0
Cpa.g.sc86.59 Carica papaya HOM05D005727 ORTHO05D007324 2.8e-89 332.4 242 70.2
TAR636G3506 Trochodendron aralioides HOM05D005727 ORTHO05D007324 6.3e-89 331.3 238 70.6
Nn2g10300 Nelumbo nucifera HOM05D005727 ORTHO05D007324 1.8e-88 329.7 240 68.8
Gohir.A09G213660 Gossypium hirsutum HOM05D005727 ORTHO05D007324 9.1e-88 327.4 239 67.4
Gohir.D09G215000 Gossypium hirsutum HOM05D005727 ORTHO05D007324 1.2e-87 327.0 239 67.4
Gorai.006G235400 Gossypium raimondii HOM05D005727 ORTHO05D007324 1.2e-87 327.0 239 67.4
Migut.J00039 Erythranthe guttata HOM05D005727 ORTHO05D007324 3.4e-87 325.5 237 66.7
Ciclev10012658m.g Citrus clementina HOM05D005727 ORTHO05D007324 4.5e-87 325.1 237 68.8
QL07p032118 Quercus lobata HOM05D005727 ORTHO05D007324 5.9e-87 324.7 241 66.0
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 1.3e-86 323.6 243 67.1
Cfa017035 Carpinus fangiana HOM05D005727 ORTHO05D007324 5.0e-86 321.6 244 66.8
Psat3g118920 Pisum sativum HOM05D005727 ORTHO05D007324 6.5e-86 321.2 232 69.4
arahy.Tifrunner.gnm1.ann1.FBM6UZ Arachis hypogaea HOM05D005727 ORTHO05D007324 1.1e-85 320.5 239 66.9
CiPaw.09G221300 Carya illinoinensis HOM05D005727 ORTHO05D007324 1.1e-85 320.5 243 67.9
CsaV3_3G033100 Cucumis sativus L. HOM05D005727 ORTHO05D007324 1.1e-85 320.5 238 68.5
Thecc.04G151700 Theobroma cacao HOM05D005727 ORTHO05D007324 1.1e-85 320.5 239 69.0
Cc06_g00400 Coffea canephora HOM05D005727 ORTHO05D007324 1.4e-85 320.1 237 68.8
Sabra04G0153300 Salix brachista HOM05D005727 ORTHO05D007324 1.4e-85 320.1 230 67.8
Actinidia20792 Actinidia chinensis HOM05D005727 ORTHO05D007324 1.9e-85 319.7 243 65.8
Potri.016G136600 Populus trichocarpa HOM05D005727 ORTHO05D007324 1.9e-85 319.7 230 68.3
MD12G1188200 Malus domestica HOM05D005727 ORTHO05D007324 3.2e-85 318.9 241 69.3
Haze_21174 Corylus avellana HOM05D005727 ORTHO05D007324 5.5e-85 318.2 244 66.0
MELO3C009104.2 Cucumis melo HOM05D005727 ORTHO05D007324 7.2e-85 317.8 233 67.4
Phvul.008G082900 Phaseolus vulgaris HOM05D005727 ORTHO05D007324 7.2e-85 317.8 237 66.2
Aa31LG5G11490 Aethionema arabicum HOM05D005727 ORTHO05D007324 1.2e-84 317.0 204 79.4
Aqoxy4G02424 Aquilegia oxysepala HOM05D005727 ORTHO05D007324 1.6e-84 316.6 241 66.8
DCAR_023975 Daucus carota HOM05D005727 ORTHO05D007324 2.7e-84 315.8 221 69.2
RcHm_v2.0_Chr3g0460491 Rosa chinensis HOM05D005727 ORTHO05D007324 2.7e-84 315.8 242 68.6
Sed0002775 Sechium edule HOM05D005727 ORTHO05D007324 2.7e-84 315.8 237 65.4
PSO017G0584 Papaver somniferum HOM05D005727 ORTHO05D007324 4.7e-84 315.1 246 65.0
FAN05G4930 Fragaria x ananassa HOM05D005727 ORTHO05D007324 7.9e-84 314.3 243 68.3
PGR031G0696 Punica granatum HOM05D005727 ORTHO05D007324 7.9e-84 314.3 218 68.8
FvH4_6g09890 Fragaria vesca HOM05D005727 ORTHO05D007324 1.0e-83 313.9 243 67.9
FAN14G2915 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.0e-83 313.9 242 67.8
VMungo1383G0728 Vigna mungo HOM05D005727 ORTHO05D007324 1.0e-83 313.9 237 65.0
ECA248G0208 Erigeron canadensis HOM05D005727 ORTHO05D007324 1.4e-83 313.5 215 70.2
Glyma.18G213900 Glycine max HOM05D005727 ORTHO05D007324 1.8e-83 313.2 237 65.8
SalBow8G0913 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.8e-83 313.2 237 64.6
Hund19761 Selenicereus undatus HOM05D005727 ORTHO05D007324 1.8e-83 313.2 235 66.4
HanXRQChr11g0345321 Helianthus annuus HOM05D005727 ORTHO05D007324 3.0e-83 312.4 226 67.7
Dinv16978 Davidia involucrata HOM05D005727 ORTHO05D007324 5.1e-83 311.6 240 65.8
Lj1g0000237 Lotus japonicus HOM05D005727 ORTHO05D007324 5.1e-83 311.6 238 64.7
GSVIVG01030181001 Vitis vinifera HOM05D005727 ORTHO05D007324 5.1e-83 311.6 238 63.9
CSS0016709 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 8.8e-83 310.8 241 66.4
Lalb_Chr01g0023751 Lupinus albus HOM05D005727 ORTHO05D007324 8.8e-83 310.8 218 70.2
BcaC01g05776 Brassica carinata HOM05D005727 ORTHO05D007324 2.0e-82 309.7 186 81.2
CANSAT35G1579 Cannabis sativa HOM05D005727 ORTHO05D007324 3.3e-82 308.9 241 65.1
FAN09G3145 Fragaria x ananassa HOM05D005727 ORTHO05D007324 3.3e-82 308.9 243 67.1
PSO170G4055 Papaver somniferum HOM05D005727 ORTHO05D007324 3.3e-82 308.9 246 64.2
Sc02g0000150 Simmondsia chinensis HOM05D005727 ORTHO05D007324 4.4e-82 308.5 216 68.5
arahy.Tifrunner.gnm1.ann1.CT9SCB Arachis hypogaea HOM05D005727 ORTHO05D007324 5.7e-82 308.1 247 63.6
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 5.7e-82 308.1 238 65.5
Lsat_1_v5_gn_5_152381 Lactuca sativa HOM05D005727 ORTHO05D007324 1.3e-81 307.0 231 66.2
PGSC0003DMG400031234 Solanum tuberosum HOM05D005727 ORTHO05D007324 2.2e-81 306.2 237 65.8
Glyma.09G275000 Glycine max HOM05D005727 ORTHO05D007324 2.8e-81 305.8 241 63.5
Sopen10g027500 Solanum pennellii HOM05D005727 ORTHO05D007324 8.2e-81 304.3 238 66.4
FAN05G2146 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.8e-80 303.1 263 62.7
FAN05G2443 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.8e-80 303.1 261 63.6
Solyc10g075020.3 Solanum lycopersicum HOM05D005727 ORTHO05D007324 2.4e-80 302.8 219 68.9
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 2.4e-80 302.8 238 63.0
CAN.G487.5 Capsicum annuum HOM05D005727 ORTHO05D007324 3.1e-80 302.4 231 65.8
TWI53G1599 Tripterygium wilfordii HOM05D005727 ORTHO05D007324 3.1e-80 302.4 240 62.9
HPP92_018087 Vanilla planifolia HOM05D005727 ORTHO05D007324 5.3e-80 301.6 240 62.9
Os12g0115900 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 9.1e-80 300.8 214 65.4
CSS0006704 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 1.2e-79 300.4 186 74.7
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 1.5e-79 300.1 217 65.4
Os11g0116400 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 1.5e-79 300.1 214 65.0
ATR1127G235 Amborella trichopoda HOM05D005727 ORTHO05D007324 2.0e-79 299.7 186 75.3
HanXRQChr01g0000121 Helianthus annuus HOM05D005727 ORTHO05D007324 2.6e-79 299.3 224 63.8
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 2.6e-79 299.3 199 74.4
Oeu057982.1 Olea europaea HOM05D005727 ORTHO05D007324 5.9e-79 298.1 218 67.0
Eucgr.A00739 Eucalyptus grandis HOM05D005727 ORTHO05D007324 1.7e-78 296.6 215 65.6
AUR62006416 Chenopodium quinoa HOM05D005727 ORTHO05D007324 2.2e-78 296.2 238 62.6
Peaxi162Scf01238g00221 Petunia axillaris HOM05D005727 ORTHO05D007324 2.2e-78 296.2 241 63.5
Actinidia32567 Actinidia chinensis HOM05D005727 ORTHO05D007324 5.0e-78 295.0 225 66.7
SalBow1G7101 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.5e-77 293.5 265 57.0
MSTRG.5500 Avicennia marina HOM05D005727 ORTHO05D007324 1.2e-76 290.4 229 62.4
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 1.2e-76 290.4 241 62.7
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 1.6e-76 290.0 237 65.0
AUR62029764 Chenopodium quinoa HOM05D005727 ORTHO05D007324 8.0e-76 287.7 252 59.9
Lj3A941T101 Lonicera japonica HOM05D005727 ORTHO05D007324 8.8e-75 284.3 236 63.1
SalBow1G5580 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.1e-74 283.9 197 67.5
AagrBONN_evm.TU.Sc2ySwM_228.1047 Anthoceros agrestis HOM05D005727 ORTHO05D007324 2.6e-74 282.7 210 64.8
COL.COLO4_06480 Corchorus olitorius HOM05D005727 ORTHO05D007324 1.6e-71 273.5 220 63.2
Pp3c23_18430 Physcomitrium patens HOM05D005727 ORTHO05D007324 3.5e-71 272.3 235 56.6
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 2.9e-70 269.2 186 64.0
SGA_v2.0_scaffold85G26621 Striga asiatica HOM05D005727 ORTHO05D007324 5.5e-69 265.0 160 76.2
Prupe.6G293500 Prunus persica HOM05D005727 ORTHO05D007324 7.2e-69 264.6 241 60.2
SalBow5G2514 Salvia bowleyana HOM05D005727 ORTHO05D007324 2.1e-68 263.1 163 74.8
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 8.0e-68 261.2 184 60.9
Duzib268G0979 Durio zibethinus HOM05D005727 ORTHO05D007324 2.3e-67 259.6 214 64.5
vmacro08938 Vaccinium macrocarpon HOM05D005727 ORTHO05D007324 1.2e-66 257.3 298 51.3
unitig_578.g15912 Utricularia gibba HOM05D005727 ORTHO05D007324 2.8e-65 252.7 197 64.0
Mapoly0080s0087 Marchantia polymorpha HOM05D005727 ORTHO05D007324 1.0e-62 244.2 242 50.0
MCO07G614 Micromonas commoda HOM05D005727 ORTHO05D007324 5.7e-58 228.4 183 57.9
Rhsim04G0121700 Rhododendron simsii HOM05D005727 ORTHO05D007324 2.2e-57 226.5 350 40.6
Cre16.g691000 Chlamydomonas reinhardtii HOM05D005727 ORTHO05D007324 1.0e-54 217.6 203 52.2
MD04G1174600 Malus domestica HOM05D005727 ORTHO05D007324 1.1e-53 214.2 133 73.7
SEGI_30349 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 1.2e-44 184.1 129 62.0
ClCG10G022720 Citrullus lanatus HOM05D005727 ORTHO05D007324 1.2e-39 167.5 104 72.1
Sopen10g027490 Solanum pennellii HOM05D005727 ORTHO05D007324 2.7e-39 166.4 104 76.0
CDE04G3002 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 3.6e-36 156.0 137 62.8
Zm00001eb406060 Zea mays HOM05D005727 ORTHO05D007324 1.2e-23 114.4 99 57.6
PRCOL_00007056 Prasinoderma coloniale HOM05D005727 ORTHO05D007324 5.1e-22 109.0 166 39.8
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 8.1e-20 101.7 186 25.3
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 7.6e-18 95.1 188 27.7
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 7.6e-18 95.1 184 25.0
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 9.9e-18 94.7 180 27.8
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 1.3e-17 94.4 183 30.6
CDE04G0740 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 2.9e-17 93.2 63 68.3
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 1.1e-16 91.3 180 24.4
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 1.1e-16 91.3 180 26.7
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 1.1e-16 91.3 183 26.8
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 3.2e-16 89.7 164 28.0
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 9.3e-16 88.2 183 25.7
MCO01G577 Micromonas commoda HOM05D005727 ORTHO05D009419 3.5e-15 86.3 186 25.8
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 7.8e-15 85.1 186 25.3
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 1.7e-14 84.0 186 26.3
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 1.5e-13 80.9 184 23.9
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 5.6e-13 79.0 183 24.0
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 5.6e-13 79.0 183 24.0
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 7.3e-13 78.6 183 24.0
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 1.3e-12 77.8 183 25.7
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 3.6e-12 76.3 185 24.3
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 1.2e-10 71.2 186 24.2
SEGI_29867 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 1.2e-10 71.2 41 78.0
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 1.2e-10 71.2 165 26.7
Ciclev10010465m.g Citrus clementina HOM05D005727 ORTHO05D007324 3.2e-08 63.2 40 70.0
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 2.3e-06 57.0 234 23.1


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