Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 6.7e-215 750.4 367 100.0
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 3.4e-211 738.0 367 98.1
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 5.5e-209 730.7 367 97.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 6.3e-205 717.2 371 93.8
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.8e-204 715.7 371 94.3
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 1.3e-202 709.5 368 94.6
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 2.9e-202 708.4 368 94.3
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 5.0e-202 707.6 368 94.3
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 8.2e-197 690.3 399 86.7
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 1.4e-196 689.5 371 89.8
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.4e-196 689.5 371 89.5
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.4e-196 689.5 371 89.5
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 4.5e-195 684.5 359 92.5
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.9e-194 681.8 371 87.6
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.1e-193 679.9 360 91.4
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.1e-193 679.9 360 91.4
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.1e-193 679.9 360 91.4
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.1e-193 679.9 360 91.4
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.1e-193 679.9 360 91.4
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 5.5e-193 677.6 369 88.6
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.7e-189 666.0 371 86.5
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.8e-189 664.5 371 86.8
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 4.1e-188 661.4 371 86.3
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.0e-187 659.1 371 86.3
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 2.7e-187 658.7 371 85.4
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.9e-187 657.5 371 86.0
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 2.9e-186 655.2 371 85.7
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 8.5e-186 653.7 372 85.2
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.5e-185 652.9 378 84.9
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.2e-184 649.8 371 84.9
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.2e-184 649.8 371 84.9
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 2.1e-184 649.0 371 84.6
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 2.7e-184 648.7 371 84.4
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 8.0e-184 647.1 371 84.6
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 1.8e-183 646.0 371 84.4
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 2.3e-183 645.6 371 84.6
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 3.0e-183 645.2 371 84.1
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 4.0e-183 644.8 371 83.8
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.2e-182 643.3 372 84.7
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.5e-182 642.9 371 83.8
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 2.0e-182 642.5 371 83.6
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.4e-182 641.3 371 83.6
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 5.7e-182 641.0 371 83.6
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 5.7e-182 641.0 372 83.9
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.7e-182 641.0 371 83.6
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 5.7e-182 641.0 371 83.6
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 2.2e-181 639.0 384 81.2
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 3.7e-181 638.3 371 82.7
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 3.7e-181 638.3 371 83.8
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 4.9e-181 637.9 366 84.4
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 6.3e-181 637.5 368 83.4
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.8e-180 636.0 372 83.1
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 2.4e-180 635.6 371 83.0
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 4.1e-180 634.8 372 83.3
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 7.0e-180 634.0 371 83.3
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.6e-179 632.9 371 81.1
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.0e-179 632.5 410 77.1
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 5.9e-179 630.9 371 82.2
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 5.9e-179 630.9 368 83.7
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.0e-178 630.2 371 82.2
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.9e-178 628.6 372 83.1
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 2.9e-178 628.6 366 82.5
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 5.0e-178 627.9 364 83.0
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.9e-177 625.9 371 82.7
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.9e-177 625.9 366 81.4
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 5.6e-177 624.4 372 82.3
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 7.3e-177 624.0 371 81.7
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 9.5e-177 623.6 370 81.9
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 3.6e-176 621.7 362 84.0
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 3.6e-176 621.7 373 80.7
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.0e-175 620.2 372 82.3
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 1.8e-175 619.4 371 80.3
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.8e-175 619.4 373 80.4
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.3e-175 619.0 373 80.4
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 4.0e-175 618.2 371 81.7
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 5.2e-175 617.8 370 81.4
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 1.5e-174 616.3 371 80.1
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.5e-174 616.3 373 81.5
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 2.2e-173 612.5 371 79.5
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.7e-173 611.7 371 80.9
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 6.4e-173 610.9 360 82.2
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.1e-172 610.1 357 82.9
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.4e-172 609.8 373 81.0
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.4e-172 609.8 371 79.8
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.8e-172 609.4 373 80.7
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.4e-172 609.0 359 82.5
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 4.1e-172 608.2 372 77.4
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 7.0e-172 607.4 366 79.8
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.6e-171 606.3 369 78.3
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.0e-171 605.9 398 75.9
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 3.5e-171 605.1 371 80.1
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.6e-171 604.7 368 79.6
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 4.6e-171 604.7 371 78.7
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 7.8e-171 604.0 371 80.1
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.9e-169 599.4 371 78.4
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.9e-169 599.4 384 77.3
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 1.9e-169 599.4 373 78.3
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 5.6e-169 597.8 373 79.1
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 7.3e-169 597.4 371 77.1
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.0e-167 593.6 351 82.1
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.4e-167 593.2 371 75.7
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.3e-167 592.4 369 78.0
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.6e-166 589.0 373 78.0
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.6e-166 589.0 368 77.7
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.6e-166 589.0 371 76.3
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 2.2e-165 585.9 375 76.5
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 4.1e-164 581.6 368 76.1
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 6.0e-163 577.8 352 80.4
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 6.6e-162 574.3 371 74.9
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 8.6e-162 573.9 368 75.5
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 4.3e-161 571.6 359 78.0
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 5.6e-161 571.2 370 75.4
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 6.2e-160 567.8 352 77.8
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 8.1e-160 567.4 371 74.4
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 8.1e-160 567.4 360 77.2
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.8e-159 566.2 371 76.8
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.8e-159 566.2 366 77.6
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 2.3e-159 565.8 367 76.3
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 1.5e-158 563.1 434 66.8
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 2.6e-158 562.4 367 76.6
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 3.4e-158 562.0 365 75.1
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 3.4e-158 562.0 371 75.2
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.8e-158 560.5 368 74.2
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.4e-156 556.6 370 73.8
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 3.2e-156 555.4 367 73.6
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.2e-156 555.4 370 73.8
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.1e-155 552.7 273 98.5
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.7e-155 552.4 352 78.4
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.7e-155 552.4 367 73.6
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 7.8e-155 550.8 369 70.7
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.7e-154 549.7 350 76.0
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 3.9e-154 548.5 369 70.7
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 3.3e-153 545.4 370 72.7
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 3.3e-153 545.4 367 72.8
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.2e-152 543.5 367 71.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.9e-149 532.3 359 71.6
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 7.1e-148 527.7 373 71.3
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 3.5e-147 525.4 397 69.0
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.3e-146 523.5 371 66.3
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.6e-144 516.5 371 65.8
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 2.4e-143 512.7 372 66.7
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 2.0e-142 509.6 371 65.0
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 5.8e-142 508.1 362 68.0
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 9.9e-142 507.3 370 65.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 7.1e-140 501.1 374 65.2
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 3.3e-137 492.3 360 64.4
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 6.2e-136 488.0 368 64.4
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 4.9e-133 478.4 352 67.0
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 9.3e-132 474.2 359 65.7
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.2e-131 473.8 281 83.3
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 7.9e-131 471.1 326 72.1
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.0e-130 470.7 284 80.3
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.8e-130 469.9 280 81.4
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.4e-127 460.3 343 70.6
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.8e-127 459.9 279 78.9
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 2.4e-127 459.5 291 77.7
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 2.4e-124 449.5 386 57.3
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 5.1e-122 441.8 327 67.9
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.9e-121 439.9 278 78.4
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.4e-116 423.7 364 55.2
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 5.5e-116 421.8 390 54.4
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 3.5e-115 419.1 271 76.4
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.8e-114 416.8 369 55.3
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 9.6e-113 411.0 240 84.6
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.8e-111 406.8 273 71.1
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 2.9e-109 399.4 275 69.5
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.9e-90 335.9 198 81.8
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 7.4e-89 331.6 270 64.8
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 4.5e-86 322.4 223 73.1
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 2.7e-83 313.2 178 84.8
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 9.7e-81 304.7 168 89.9
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.7e-80 303.9 197 73.6
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 1.3e-56 224.6 261 52.5
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 1.1e-47 194.9 437 29.1
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 7.0e-47 192.2 359 32.0
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.2e-43 181.4 393 27.7
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.5e-41 174.5 114 79.8
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 1.3e-37 161.4 119 65.5
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 2.3e-37 160.6 207 44.0
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 3.3e-36 156.8 119 63.9
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 2.6e-33 147.1 293 30.4
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.1e-31 141.7 84 76.2
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 5.4e-31 139.4 113 60.2
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 4.5e-09 66.6 68 52.9
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 5.8e-09 66.2 49 69.4


User provided reference genes

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