Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 6.2e-233 810.4 414 100.0
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 2.8e-225 785.0 413 96.9
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 8.9e-216 753.4 414 91.8
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 3.0e-211 738.4 413 90.8
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 8.1e-209 730.3 414 87.9
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 8.1e-201 703.7 412 85.0
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 4.5e-199 698.0 412 84.5
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 9.9e-199 696.8 414 84.5
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 2.2e-198 695.7 412 83.7
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 3.8e-198 694.9 414 83.1
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 3.8e-198 694.9 414 83.1
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 1.9e-197 692.6 414 82.9
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 4.2e-197 691.4 414 82.9
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 7.1e-197 690.6 413 84.0
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 1.2e-196 689.9 414 82.6
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 3.5e-196 688.3 414 82.4
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 4.6e-196 688.0 412 82.8
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 1.5e-194 682.9 412 83.0
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 2.9e-182 642.1 412 77.7
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 1.1e-181 640.2 411 76.6
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 1.6e-180 636.3 411 77.9
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 1.6e-180 636.3 411 77.6
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 1.0e-179 633.6 411 76.9
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 1.0e-179 633.6 411 77.1
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 5.7e-178 627.9 412 76.5
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 7.4e-178 627.5 411 75.7
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 9.7e-178 627.1 410 76.6
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 2.2e-177 625.9 411 76.2
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 2.8e-177 625.5 411 75.4
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 4.8e-177 624.8 411 74.9
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 1.1e-176 623.6 413 75.1
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 1.1e-176 623.6 411 75.2
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 1.8e-176 622.9 411 75.7
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 2.4e-176 622.5 414 75.1
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 5.3e-176 621.3 413 74.8
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 2.0e-175 619.4 410 73.7
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 5.9e-175 617.8 409 75.3
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 5.9e-175 617.8 413 74.1
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 5.9e-175 617.8 410 74.9
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 7.7e-175 617.5 411 74.2
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 7.7e-175 617.5 410 74.4
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 1.0e-174 617.1 410 74.9
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 1.7e-174 616.3 413 73.4
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.7e-174 616.3 410 74.9
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.2e-174 615.9 410 74.6
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 2.9e-174 615.5 410 74.6
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 2.9e-174 615.5 409 75.1
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.9e-174 615.5 410 74.6
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 2.9e-174 615.5 412 73.3
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 3.8e-174 615.1 410 74.4
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 5.0e-174 614.8 410 74.4
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 6.5e-174 614.4 411 74.0
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 1.1e-173 613.6 411 73.0
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 3.2e-173 612.1 410 73.9
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 4.2e-173 611.7 412 74.0
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 7.2e-173 610.9 417 73.6
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 1.2e-172 610.1 416 74.0
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 1.2e-172 610.1 415 73.3
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 1.2e-172 610.1 410 73.4
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 1.6e-172 609.8 410 73.9
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 2.1e-172 609.4 413 71.9
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 2.1e-172 609.4 410 73.4
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 2.7e-172 609.0 411 72.0
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 4.6e-172 608.2 412 73.3
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 6.1e-172 607.8 416 73.6
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 6.1e-172 607.8 413 73.1
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 7.9e-172 607.4 413 71.9
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 7.9e-172 607.4 413 73.1
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 3.0e-171 605.5 415 73.3
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 3.9e-171 605.1 411 74.0
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 6.7e-171 604.4 412 72.3
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 8.8e-171 604.0 413 71.9
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 8.8e-171 604.0 413 71.4
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 1.1e-170 603.6 416 72.1
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 1.5e-170 603.2 410 72.2
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 2.0e-170 602.8 412 72.8
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 2.0e-170 602.8 414 72.9
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 3.3e-170 602.1 410 72.2
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 4.3e-170 601.7 411 72.7
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 5.7e-170 601.3 412 72.1
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 2.2e-169 599.4 411 73.2
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 2.2e-169 599.4 415 72.8
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 3.7e-169 598.6 414 72.9
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 6.3e-169 597.8 416 71.6
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 6.3e-169 597.8 410 72.2
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 8.2e-169 597.4 412 71.6
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 1.4e-168 596.7 415 72.5
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 1.8e-168 596.3 415 72.5
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 3.1e-168 595.5 414 71.5
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 5.3e-168 594.7 415 72.3
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 7.7e-167 590.9 415 71.3
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 3.8e-166 588.6 409 68.9
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 1.1e-165 587.0 413 71.2
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 1.4e-165 586.6 409 69.9
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 1.4e-165 586.6 444 67.3
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 9.4e-165 583.9 418 69.1
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 6.1e-164 581.3 413 70.5
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 7.9e-164 580.9 415 71.1
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 5.1e-163 578.2 456 65.1
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 4.4e-162 575.1 410 69.8
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 7.4e-162 574.3 414 68.4
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 1.7e-161 573.2 413 68.3
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 4.8e-161 571.6 413 67.3
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 1.8e-160 569.7 410 68.8
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 9.1e-160 567.4 417 67.6
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 5.9e-159 564.7 419 69.5
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 1.3e-158 563.5 413 66.8
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 2.9e-158 562.4 477 62.1
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 2.7e-156 555.8 376 72.9
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 1.4e-155 553.5 411 66.2
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 3.0e-155 552.4 466 60.9
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 1.7e-153 546.6 403 69.5
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 4.1e-152 542.0 348 76.1
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 5.3e-152 541.6 506 57.9
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 3.8e-150 535.4 433 62.6
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 1.6e-148 530.0 416 65.4
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 2.6e-146 522.7 411 64.2
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 1.6e-143 513.5 411 61.6
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 1.1e-136 490.7 329 72.9
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 4.1e-136 488.8 410 58.8
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 5.9e-135 485.0 333 72.4
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 1.0e-131 474.2 303 75.6
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 7.0e-128 461.5 410 57.8
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 9.2e-128 461.1 417 61.4
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 1.0e-123 447.6 335 67.5
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 3.1e-123 446.0 350 64.0
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 2.6e-122 443.0 418 58.4
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 2.2e-121 439.9 418 58.6
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.3e-118 430.6 238 88.7
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 8.9e-99 364.8 240 74.2
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 6.7e-86 322.0 181 87.3
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 1.1e-83 314.7 432 44.7
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 1.0e-70 271.6 392 41.6
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 5.1e-70 269.2 237 60.8
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 7.9e-63 245.4 183 72.7
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 3.7e-60 236.5 329 41.9
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 2.8e-44 183.7 115 77.4
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 1.3e-41 174.9 220 47.3
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 1.2e-39 168.3 239 44.8
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 2.7e-34 150.6 125 60.8
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 5.7e-29 132.9 79 79.7
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 2.7e-26 124.0 74 79.7
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 2.7e-26 124.0 74 79.7
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 1.3e-25 121.7 85 65.9
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 3.8e-25 120.2 98 64.3
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 3.8e-25 120.2 98 64.3
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 5.0e-25 119.8 74 77.0
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 2.1e-23 114.4 91 67.0
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 1.0e-22 112.1 83 61.4
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 6.8e-22 109.4 88 61.4
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 1.3e-20 105.1 66 75.8
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 1.7e-20 104.8 183 42.6
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 1.7e-20 104.8 84 61.9
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 5.0e-17 93.2 81 58.0
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 6.6e-17 92.8 66 71.2
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 8.6e-17 92.4 73 58.9
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 3.3e-16 90.5 115 49.6
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 4.3e-16 90.1 115 48.7
A09p54850 Brassica napus HOM05D004491 ORTHO05D102086 9.2e-11 72.4 125 44.8
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 1.2e-10 72.0 59 55.9
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 6.6e-09 66.2 87 43.7


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