Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 2.2e-54 215.3 102 100.0
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 1.0e-51 206.5 102 94.1
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 1.9e-50 202.2 102 95.1
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 1.6e-49 199.1 102 93.1
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 7.9e-49 196.8 102 92.2
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 3.3e-47 191.4 102 88.2
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 5.7e-47 190.7 102 89.2
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 9.7e-47 189.9 102 88.2
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 9.7e-47 189.9 102 88.2
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 9.7e-47 189.9 102 88.2
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 9.7e-47 189.9 102 88.2
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 1.7e-46 189.1 102 88.2
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 3.1e-45 184.9 102 86.3
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 4.1e-45 184.5 102 86.3
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 7.0e-45 183.7 102 87.3
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 1.2e-44 183.0 102 86.3
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 4.5e-44 181.0 102 84.3
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 4.5e-44 181.0 102 85.3
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 5.9e-44 180.6 102 84.3
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 7.7e-44 180.3 102 83.3
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 7.7e-44 180.3 102 86.3
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 1.0e-43 179.9 102 85.3
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 1.3e-43 179.5 101 83.2
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 1.3e-43 179.5 102 81.4
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 1.7e-43 179.1 102 85.3
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 1.7e-43 179.1 102 85.3
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 2.2e-43 178.7 102 84.3
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 2.2e-43 178.7 102 84.3
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 2.2e-43 178.7 102 83.3
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 2.2e-43 178.7 102 84.3
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 2.9e-43 178.3 102 84.3
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 2.9e-43 178.3 102 83.3
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 5.0e-43 177.6 102 83.3
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 5.0e-43 177.6 102 83.3
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 5.0e-43 177.6 102 84.3
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 5.0e-43 177.6 102 82.4
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 6.5e-43 177.2 102 84.3
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 6.5e-43 177.2 102 84.3
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 6.5e-43 177.2 102 84.3
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 1.1e-42 176.4 102 83.3
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.1e-42 176.4 102 81.4
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 1.1e-42 176.4 102 81.4
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 1.5e-42 176.0 102 82.4
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 1.9e-42 175.6 102 81.4
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 2.5e-42 175.3 102 80.4
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 2.5e-42 175.3 102 81.4
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 3.2e-42 174.9 102 82.4
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 3.2e-42 174.9 102 82.4
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 3.2e-42 174.9 102 81.4
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 3.2e-42 174.9 102 81.4
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 3.2e-42 174.9 102 79.4
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 4.2e-42 174.5 102 81.4
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 4.2e-42 174.5 100 84.0
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 5.5e-42 174.1 102 83.3
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 5.5e-42 174.1 102 83.3
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 5.5e-42 174.1 102 80.4
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 5.5e-42 174.1 102 81.4
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 5.5e-42 174.1 102 81.4
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 7.2e-42 173.7 102 83.3
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 7.2e-42 173.7 102 81.4
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 1.2e-41 172.9 102 81.4
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 2.1e-41 172.2 102 78.4
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 2.7e-41 171.8 102 82.4
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 2.7e-41 171.8 102 81.4
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 2.7e-41 171.8 101 80.2
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 2.7e-41 171.8 102 81.4
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 3.6e-41 171.4 102 83.3
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 4.7e-41 171.0 102 80.4
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 6.1e-41 170.6 102 81.4
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 6.1e-41 170.6 102 81.4
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 6.1e-41 170.6 102 78.4
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 6.1e-41 170.6 102 78.4
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 8.0e-41 170.2 102 79.4
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 1.0e-40 169.9 102 80.4
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.8e-40 169.1 102 80.4
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.8e-40 169.1 102 80.4
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 1.8e-40 169.1 102 81.4
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 3.0e-40 168.3 102 81.4
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 3.0e-40 168.3 102 79.4
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 4.0e-40 167.9 102 80.4
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 4.0e-40 167.9 102 79.4
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 4.0e-40 167.9 102 79.4
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 8.8e-40 166.8 102 79.4
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 8.8e-40 166.8 102 79.4
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 8.8e-40 166.8 102 79.4
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 1.2e-39 166.4 102 78.4
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 1.5e-39 166.0 112 72.3
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 3.3e-39 164.9 100 79.0
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 5.7e-39 164.1 89 87.6
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 5.7e-39 164.1 102 79.4
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 9.7e-39 163.3 100 81.0
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 2.2e-38 162.2 94 84.0
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 2.8e-38 161.8 93 82.8
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 2.8e-38 161.8 128 66.4
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.6e-36 156.0 106 74.5
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 5.9e-36 154.1 102 73.5
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 7.7e-36 153.7 93 79.6
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 2.2e-35 152.1 73 97.3
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 2.9e-35 151.8 93 79.6
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 3.8e-35 151.4 102 68.6
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.1e-34 149.8 102 66.7
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 6.1e-33 144.1 102 67.6
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 1.2e-31 139.8 102 65.7
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 2.2e-30 135.6 102 61.8
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 2.4e-29 132.1 95 67.4
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 1.6e-28 129.4 100 61.0
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 2.0e-28 129.0 102 55.9
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 4.5e-28 127.9 66 90.9
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 5.9e-28 127.5 66 86.4
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.7e-27 125.9 65 84.6
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 2.9e-27 125.2 65 87.7
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 8.6e-27 123.6 65 84.6
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 2.5e-26 122.1 95 67.4
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 2.8e-25 118.6 94 61.7
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 6.1e-25 117.5 102 55.9
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 1.8e-24 115.9 63 87.3
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 2.8e-22 108.6 74 70.3
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 6.6e-19 97.4 103 45.6
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.7e-14 82.8 55 72.7
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 4.1e-13 78.2 45 80.0
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 5.4e-13 77.8 63 63.5
SHI13486 Sapria himalayana HOM05D006419 ORTHO05D008096 9.8e-07 57.0 39 64.1


User provided reference genes

Program Settings