Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G42540 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 1.2e-55 219.9 140 100.0
AL4G41090 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 2.2e-49 199.1 140 90.7
Carub.0004s2499 Capsella rubella HOM05D010227 ORTHO05D012306 1.1e-48 196.8 140 87.9
AL4G41070 Arabidopsis lyrata HOM05D010227 ORTHO05D012306 2.0e-42 176.0 140 80.7
AT2G42530 Arabidopsis thaliana HOM05D010227 ORTHO05D012306 2.7e-39 165.6 140 77.1
Sp4g24660 Schrenkiella parvula HOM05D010227 ORTHO05D012306 1.0e-38 163.7 141 77.3
Thhalv10017393m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 4.3e-37 158.3 140 75.7
BraA03t11585Z Brassica rapa HOM05D010227 ORTHO05D012306 7.3e-37 157.5 146 65.1
Carub.0004s2498 Capsella rubella HOM05D010227 ORTHO05D012306 1.3e-36 156.8 129 80.6
A03p23680 Brassica napus HOM05D010227 ORTHO05D012306 6.2e-36 154.5 141 66.0
C03p28240 Brassica napus HOM05D010227 ORTHO05D012306 1.8e-35 152.9 141 65.2
Thhalv10017395m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 7.6e-34 147.5 140 74.3
BcaC01g05276 Brassica carinata HOM05D010227 ORTHO05D012306 3.8e-33 145.2 140 67.1
C03p28260 Brassica napus HOM05D010227 ORTHO05D012306 3.8e-33 145.2 140 67.1
BcaB01g03455 Brassica carinata HOM05D010227 ORTHO05D012306 4.9e-33 144.8 106 76.4
CARHR137650 Cardamine hirsuta HOM05D010227 ORTHO05D012306 1.1e-32 143.7 140 72.9
BolC3t15199H Brassica oleracea HOM05D010227 ORTHO05D012306 1.4e-32 143.3 101 78.2
Sp4g24670 Schrenkiella parvula HOM05D010227 ORTHO05D012306 9.3e-32 140.6 140 72.1
CARHR137660 Cardamine hirsuta HOM05D010227 ORTHO05D012306 3.5e-31 138.7 141 71.6
A03p23700 Brassica napus HOM05D010227 ORTHO05D012306 1.8e-30 136.3 107 72.0
Thhalv10017394m.g Eutrema salsugineum HOM05D010227 ORTHO05D012306 1.9e-29 132.9 140 68.6
BcaC01g05278 Brassica carinata HOM05D010227 ORTHO05D012306 5.8e-26 121.3 141 56.0
BolC3t15197H Brassica oleracea HOM05D010227 ORTHO05D012306 1.9e-21 106.3 141 51.1
CARHR146250 Cardamine hirsuta HOM05D009656 ORTHO05D011940 2.7e-07 59.3 124 40.3
CARHR146130 Cardamine hirsuta HOM05D009656 ORTHO05D011940 3.6e-07 58.9 117 41.0
Sp2g14560 Schrenkiella parvula HOM05D009656 ORTHO05D011940 1.8e-06 56.6 155 33.5
BcaB07g30284 Brassica carinata HOM05D009656 ORTHO05D011940 2.3e-06 56.2 156 32.1
Aa31LG7G410 Aethionema arabicum HOM05D000133 ORTHO05D005407 3.0e-06 55.8 70 55.7
AL5G13530 Arabidopsis lyrata HOM05D009656 ORTHO05D011940 3.0e-06 55.8 121 39.7
AT2G03740 Arabidopsis thaliana HOM05D009656 ORTHO05D011940 5.1e-06 55.1 121 39.7


User provided reference genes

Program Settings