Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G32820 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 1.5e-133 479.6 250 100.0
AL4G28320 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 3.2e-91 339.0 255 75.3
AL4G28640 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 1.4e-54 217.2 251 57.4
Carub.0004s1425 Capsella rubella HOM05D007973 ORTHO05D011027 7.6e-53 211.5 247 55.5
Thhalv10017685m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 3.3e-40 169.5 267 45.3
Thhalv10024105m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.3e-36 157.5 192 52.6
A03p18360 Brassica napus HOM05D007973 ORTHO05D011027 2.2e-36 156.8 181 54.7
BcaB01g03937 Brassica carinata HOM05D007973 ORTHO05D011027 8.5e-36 154.8 183 52.5
BcaC01g05887 Brassica carinata HOM05D007973 ORTHO05D011027 3.2e-35 152.9 181 53.6
BraA03t11099Z Brassica rapa HOM05D007973 ORTHO05D011027 5.5e-35 152.1 181 53.0
AT2G33300 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 1.2e-34 151.0 269 44.6
BcaB01g03935 Brassica carinata HOM05D007973 ORTHO05D011027 2.7e-34 149.8 171 54.4
BcaB01g03962 Brassica carinata HOM05D007973 ORTHO05D011027 1.5e-32 144.1 254 44.1
BcaB01g03963 Brassica carinata HOM05D007973 ORTHO05D011027 1.5e-32 144.1 254 44.1
BcaC01g05888 Brassica carinata HOM05D007973 ORTHO05D011027 1.5e-32 144.1 257 42.4
C03p21420 Brassica napus HOM05D007973 ORTHO05D011027 1.5e-32 144.1 257 42.4
BolC3t14525H Brassica oleracea HOM05D007973 ORTHO05D011027 4.4e-32 142.5 257 42.4
CARHR120790 Cardamine hirsuta HOM05D007973 ORTHO05D011027 1.4e-30 137.5 213 46.9
AT2G33090 Arabidopsis thaliana HOM05D007973 ORTHO05D011027 2.6e-29 133.3 250 39.2
BcaB01g03938 Brassica carinata HOM05D007973 ORTHO05D011027 2.6e-29 133.3 170 49.4
BolC3t14526H Brassica oleracea HOM05D007973 ORTHO05D011027 2.6e-29 133.3 169 50.9
Thhalv10017705m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 2.6e-29 133.3 258 41.9
AT2G13640 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 7.7e-29 131.7 266 38.3
C03p21430 Brassica napus HOM05D007973 ORTHO05D011027 2.9e-28 129.8 169 50.3
AL4G22500 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 6.5e-28 128.6 249 36.9
AL4G22510 Arabidopsis lyrata HOM05D007973 ORTHO05D011363 6.5e-28 128.6 249 36.9
Thhalv10023971m.g Eutrema salsugineum HOM05D007973 ORTHO05D011027 1.9e-27 127.1 193 45.1
BcaC01g05861 Brassica carinata HOM05D007973 ORTHO05D011027 2.7e-26 123.2 183 45.9
AT2G27780 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 6.1e-26 122.1 271 37.3
AT5G27310 Arabidopsis thaliana HOM05D007973 ORTHO05D011363 6.1e-26 122.1 272 40.1
C03p21640 Brassica napus HOM05D007973 ORTHO05D011027 9.7e-24 114.8 178 44.4
BolC3t14548H Brassica oleracea HOM05D007973 ORTHO05D011027 9.7e-24 114.8 178 44.4
Aa31LG10G13500 Aethionema arabicum HOM05D007973 ORTHO05D011027 1.7e-23 114.0 106 55.7
CARHR126530 Cardamine hirsuta HOM05D007973 ORTHO05D011363 2.8e-23 113.2 261 36.0
Aa31LG10G13910 Aethionema arabicum HOM05D007973 ORTHO05D011027 1.1e-22 111.3 119 52.1
A05p12970 Brassica napus HOM05D007973 ORTHO05D011363 2.7e-21 106.7 110 53.6
BraA05t20237Z Brassica rapa HOM05D007973 ORTHO05D011363 2.7e-21 106.7 110 53.6
C04p17050 Brassica napus HOM05D007973 ORTHO05D011363 2.9e-20 103.2 249 34.1
BolC4t23258H Brassica oleracea HOM05D007973 ORTHO05D011363 2.9e-20 103.2 249 34.1
A05p13330 Brassica napus HOM05D007973 ORTHO05D011363 8.5e-20 101.7 110 51.8
A05p13350 Brassica napus HOM05D007973 ORTHO05D011363 8.5e-20 101.7 187 38.0
BraA05t20272Z Brassica rapa HOM05D007973 ORTHO05D011363 8.5e-20 101.7 110 51.8
BraA05t20274Z Brassica rapa HOM05D007973 ORTHO05D011363 8.5e-20 101.7 187 38.0
BcaB02g10486 Brassica carinata HOM05D007973 ORTHO05D011363 1.1e-19 101.3 105 51.4
C04p17030 Brassica napus HOM05D007973 ORTHO05D011363 1.1e-19 101.3 91 58.2
C04p17440 Brassica napus HOM05D007973 ORTHO05D011363 1.1e-19 101.3 91 58.2
BolC4t23294H Brassica oleracea HOM05D007973 ORTHO05D011363 1.1e-19 101.3 91 58.2
Sp4g14980 Schrenkiella parvula HOM05D007973 ORTHO05D011363 3.2e-19 99.8 290 34.1
BcaB02g10456 Brassica carinata HOM05D007973 ORTHO05D011363 9.4e-19 98.2 249 32.5
BcaB02g10454 Brassica carinata HOM05D007973 ORTHO05D011363 2.1e-18 97.1 105 50.5
Carub.0004s1401 Capsella rubella HOM05D007973 ORTHO05D011363 2.1e-18 97.1 279 35.5
A05p12940 Brassica napus HOM05D007973 ORTHO05D011363 2.7e-18 96.7 105 51.4
BraA05t20234Z Brassica rapa HOM05D007973 ORTHO05D011363 2.7e-18 96.7 105 51.4
BcaB02g10484 Brassica carinata HOM05D007973 ORTHO05D011363 3.6e-18 96.3 106 49.1
THA.LOC104819096 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 3.6e-18 96.3 97 49.5
THA.LOC104820138 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.8e-17 94.0 97 48.5
THA.LOC104820139 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 1.8e-17 94.0 97 48.5
THA.LOC104798702 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 2.8e-15 86.7 92 48.9
THA.LOC104813254 Tarenaya hassleriana HOM05D007973 ORTHO05D011027 3.7e-15 86.3 93 48.4
BcaC02g11347 Brassica carinata HOM05D007973 ORTHO05D011363 3.1e-14 83.2 106 47.2
BolC8t48477H Brassica oleracea HOM05D007973 ORTHO05D011363 2.3e-12 77.0 234 32.1
BolC8t48474H Brassica oleracea HOM05D007973 ORTHO05D011363 8.6e-12 75.1 234 32.1
BcaC07g38070 Brassica carinata HOM05D007973 ORTHO05D011363 1.5e-11 74.3 246 32.5
BcaC02g11344 Brassica carinata HOM05D007973 ORTHO05D011363 1.2e-10 71.2 223 28.3
BcaC01g05890 Brassica carinata HOM05D007973 ORTHO05D011027 1.8e-09 67.4 189 37.0
Cpa.g.sc17.122 Carica papaya HOM05D002276 ORTHO05D002381 5.2e-09 65.9 81 46.9
AL6G33790 Arabidopsis lyrata HOM05D007973 ORTHO05D011027 6.8e-09 65.5 118 40.7
Cpa.g.c30173.2 Carica papaya HOM05D002276 ORTHO05D002381 1.2e-08 64.7 81 45.7
Cpa.g.sc17.140 Carica papaya HOM05D002276 ORTHO05D002381 2.6e-08 63.5 81 44.4
Cpa.g.c31254 Carica papaya HOM05D002276 ORTHO05D002381 3.4e-08 63.2 81 44.4
Cpa.g.c34878 Carica papaya HOM05D002276 ORTHO05D002381 3.4e-08 63.2 81 44.4
Cpa.g.sc17.144 Carica papaya HOM05D002276 ORTHO05D002381 3.4e-08 63.2 81 44.4
Cpa.g.sc17.131 Carica papaya HOM05D002276 ORTHO05D002381 4.4e-08 62.8 81 43.2
Sp4g15210 Schrenkiella parvula HOM05D007973 ORTHO05D011027 4.4e-08 62.8 184 35.3
Cpa.g.c27218.2 Carica papaya HOM05D002276 ORTHO05D002381 5.7e-08 62.4 79 45.6
Cpa.g.sc17.136 Carica papaya HOM05D002276 ORTHO05D002381 7.5e-08 62.0 81 44.4
Cpa.g.sc17.145 Carica papaya HOM05D002276 ORTHO05D002381 7.5e-08 62.0 81 44.4
Cpa.g.c40325 Carica papaya HOM05D002276 ORTHO05D002381 2.2e-07 60.5 79 44.3
Cpa.g.sc17.139 Carica papaya HOM05D007973 ORTHO05D011027 2.8e-07 60.1 78 44.9
Cpa.g.c41267 Carica papaya HOM05D002276 ORTHO05D002381 3.7e-07 59.7 77 45.5
Cpa.g.sc17.143 Carica papaya HOM05D007973 ORTHO05D011027 3.7e-07 59.7 77 45.5
Cpa.g.sc956.1 Carica papaya HOM05D002276 ORTHO05D002381 6.3e-07 58.9 72 48.6
Cpa.g.sc736.3 Carica papaya HOM05D002276 ORTHO05D002381 8.3e-07 58.5 83 42.2
PGR031G2695 Punica granatum HOM05D002276 ORTHO05D002381 9.2e-06 55.1 83 38.6


User provided reference genes

Program Settings