Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 1.5e-217 759.2 386 100.0
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 6.9e-202 707.2 382 93.5
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 2.9e-200 701.8 385 91.7
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 3.8e-200 701.4 385 91.7
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 4.9e-200 701.0 385 91.7
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 1.1e-199 699.9 385 91.7
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 4.2e-199 698.0 385 91.9
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 2.1e-198 695.7 386 90.7
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 1.3e-197 693.0 386 90.7
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 2.3e-197 692.2 386 90.2
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 5.6e-196 687.6 387 90.2
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 1.9e-188 662.5 385 86.8
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 1.2e-185 653.3 339 96.5
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 1.1e-172 610.1 382 79.3
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 6.1e-150 534.6 382 69.6
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 2.4e-146 522.7 383 66.8
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 9.1e-146 520.8 383 66.6
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 5.9e-145 518.1 386 68.1
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 2.9e-144 515.8 386 67.6
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 3.8e-144 515.4 383 68.1
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 5.0e-144 515.0 385 66.5
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 6.5e-144 514.6 382 66.8
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 2.5e-143 512.7 385 66.2
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 2.5e-143 512.7 383 66.3
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 3.2e-143 512.3 384 65.6
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 9.4e-143 510.8 392 65.1
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 9.4e-143 510.8 358 69.6
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 1.2e-142 510.4 349 69.9
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 2.1e-142 509.6 385 65.7
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 2.1e-142 509.6 384 65.4
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 6.1e-142 508.1 383 66.6
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 1.4e-141 506.9 349 69.3
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 1.2e-140 503.8 386 65.3
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 1.2e-140 503.8 387 66.4
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 1.5e-140 503.4 382 64.9
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 5.7e-140 501.5 387 64.1
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 5.7e-140 501.5 373 67.3
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 9.7e-140 500.7 350 69.4
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 1.7e-139 500.0 385 64.9
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 2.2e-139 499.6 336 71.7
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 2.8e-139 499.2 349 68.8
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 3.7e-139 498.8 384 65.1
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 4.8e-139 498.4 361 67.0
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 8.2e-139 497.7 382 66.8
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 1.8e-138 496.5 387 63.6
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 2.4e-138 496.1 382 64.1
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 3.1e-138 495.7 382 64.1
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 4.1e-138 495.4 382 63.9
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 4.1e-138 495.4 382 64.4
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 2.0e-137 493.0 363 65.6
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 3.5e-137 492.3 385 62.9
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 3.5e-137 492.3 335 70.4
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 3.8e-136 488.8 348 67.5
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 5.0e-136 488.4 373 64.9
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 5.0e-136 488.4 382 64.4
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 6.5e-136 488.0 391 62.9
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 1.1e-135 487.3 385 62.9
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 1.9e-135 486.5 359 66.3
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 2.5e-135 486.1 375 64.3
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 3.2e-135 485.7 352 67.3
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 5.5e-135 485.0 377 63.9
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 9.4e-135 484.2 390 62.3
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.6e-134 483.4 382 63.9
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 2.1e-134 483.0 373 64.1
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 2.7e-134 482.6 352 67.0
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 2.7e-134 482.6 354 67.5
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 4.7e-134 481.9 388 62.4
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 1.0e-133 480.7 382 63.9
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 1.8e-133 479.9 387 62.5
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 2.3e-133 479.6 348 66.1
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 3.0e-133 479.2 384 62.5
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 5.2e-133 478.4 379 64.1
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 1.5e-132 476.9 463 54.4
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.3e-131 473.8 343 65.6
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 1.7e-131 473.4 405 59.8
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.8e-130 469.9 343 65.3
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 3.1e-130 469.2 346 66.8
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 4.1e-130 468.8 387 60.7
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 7.0e-130 468.0 354 65.3
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 7.0e-130 468.0 336 66.4
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 1.1e-127 460.7 361 63.2
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 4.7e-126 455.3 335 65.7
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 6.8e-125 451.4 342 63.5
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 4.4e-124 448.7 331 66.8
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 5.7e-124 448.4 382 59.7
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 8.3e-123 444.5 336 63.4
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 4.3e-119 432.2 344 60.8
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 2.3e-117 426.4 390 58.5
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 3.4e-116 422.5 335 63.9
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 5.7e-116 421.8 297 67.3
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.3e-111 406.0 390 55.6
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 2.6e-108 396.4 392 54.8
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 1.3e-107 394.0 369 54.2
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 1.6e-105 387.1 366 52.7
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 1.6e-105 387.1 271 66.1
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 2.7e-105 386.3 342 55.0
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 3.0e-104 382.9 354 54.2
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 3.9e-96 355.9 368 51.6
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 3.2e-82 309.7 233 66.1
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 1.5e-79 300.8 335 47.8
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 3.6e-78 296.2 244 60.2
SGA_v2.0_scaffold159G37563 Striga asiatica HOM05D002380 ORTHO05D001198 1.2e-76 291.2 321 50.8
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 6.0e-73 278.9 359 40.9
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 1.9e-63 247.3 209 58.4
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 1.3e-62 244.6 303 42.6
Hund20419 Selenicereus undatus HOM05D002380 ORTHO05D008286 2.4e-45 187.2 116 71.6
Hma1.2p1_0895F.1_g233700 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 3.4e-44 183.3 116 71.6
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 7.2e-42 175.6 159 57.9
PGSC0003DMG400020719 Solanum tuberosum HOM05D002380 ORTHO05D008286 1.4e-40 171.4 106 72.6
Aqoxy1G02984 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 4.7e-33 146.4 99 66.7
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 2.6e-31 140.6 163 48.5
Hund20420 Selenicereus undatus HOM05D002380 ORTHO05D010615 5.9e-28 129.4 85 71.8
CBR_g8452 Chara braunii HOM05D002380 ORTHO05D008286 7.0e-21 105.9 90 50.0
Gohir.A07G186850 Gossypium hirsutum HOM05D002380 ORTHO05D026288 3.0e-16 90.5 65 69.2
CBR_g8454 Chara braunii HOM05D002380 ORTHO05D008286 3.1e-13 80.5 85 43.5
Lalb_Chr04g0249911 Lupinus albus HOM05D002380 ORTHO05D026288 9.5e-10 68.9 80 51.2
Actinidia09729 Actinidia chinensis HOM05D002380 ORTHO05D026288 2.1e-09 67.8 83 50.6
CBR_g8455 Chara braunii HOM05D002380 ORTHO05D008286 3.7e-06 57.0 61 50.8
Lj1P772T14 Lonicera japonica HOM05D002380 ORTHO05D008286 6.3e-06 56.2 77 46.8


User provided reference genes

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