Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 3.2e-78 295.0 153 100.0
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.2e-71 272.3 147 95.2
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 2.2e-71 272.3 150 91.3
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 6.5e-71 270.8 150 91.3
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 3.2e-70 268.5 150 90.0
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 3.2e-70 268.5 150 90.0
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 7.2e-70 267.3 150 89.3
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 2.1e-69 265.8 150 88.7
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 1.1e-67 260.0 153 87.6
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 1.5e-67 259.6 146 89.7
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.3e-66 256.5 150 88.7
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 5.3e-65 251.1 149 85.2
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 2.0e-59 232.6 150 74.7
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 6.5e-47 191.0 149 63.8
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.7e-45 185.7 143 64.3
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 3.6e-45 185.3 139 66.2
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 4.0e-44 181.8 120 71.7
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.0e-43 179.5 120 70.8
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 3.4e-43 178.7 150 61.3
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 4.4e-43 178.3 143 62.2
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 1.3e-42 176.8 127 66.9
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 3.7e-42 175.3 135 63.0
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 1.1e-41 173.7 155 57.4
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.4e-41 173.3 143 62.2
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.4e-41 173.3 143 61.5
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.4e-41 173.3 131 64.1
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.4e-41 173.3 143 62.9
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 1.8e-41 172.9 129 65.9
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 2.4e-41 172.6 132 62.9
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 2.4e-41 172.6 126 64.3
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 3.1e-41 172.2 120 68.3
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 3.1e-41 172.2 143 59.4
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 4.1e-41 171.8 127 65.4
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 5.4e-41 171.4 126 66.7
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 7.0e-41 171.0 150 60.0
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 9.2e-41 170.6 129 64.3
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 1.2e-40 170.2 148 58.8
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 1.6e-40 169.9 141 62.4
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 1.6e-40 169.9 120 65.8
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.7e-40 169.1 150 59.3
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 4.5e-40 168.3 132 62.9
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 7.7e-40 167.5 140 63.6
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 7.7e-40 167.5 124 64.5
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.0e-39 167.2 150 59.3
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 1.3e-39 166.8 132 61.4
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.9e-39 165.6 120 65.0
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 5.0e-39 164.9 133 59.4
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 8.6e-39 164.1 145 60.0
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 8.6e-39 164.1 132 60.6
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 8.6e-39 164.1 152 57.9
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 8.6e-39 164.1 152 57.9
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.1e-38 163.7 124 62.9
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 2.5e-38 162.5 132 59.8
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 3.3e-38 162.2 127 62.2
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 4.3e-38 161.8 120 64.2
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.6e-38 161.4 124 60.5
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 5.6e-38 161.4 120 63.3
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 7.3e-38 161.0 121 66.1
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 7.3e-38 161.0 125 62.4
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 7.3e-38 161.0 133 58.6
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.8e-37 159.1 120 64.2
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.8e-37 159.1 120 64.2
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 2.8e-37 159.1 127 59.8
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 2.8e-37 159.1 121 62.0
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 3.6e-37 158.7 127 60.6
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 4.7e-37 158.3 133 57.1
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 4.7e-37 158.3 137 56.9
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 6.1e-37 157.9 155 54.2
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 8.0e-37 157.5 121 61.2
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.0e-36 157.1 121 61.2
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.4e-36 156.8 125 60.0
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 6.8e-36 154.5 133 55.6
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 3.4e-35 152.1 132 55.3
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.4e-35 152.1 132 55.3
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 5.7e-35 151.4 120 60.0
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 9.8e-35 150.6 105 67.6
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 1.3e-34 150.2 131 55.0
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.7e-34 149.8 111 65.8
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 2.9e-34 149.1 127 55.9
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 2.9e-34 149.1 125 58.4
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.9e-34 148.3 105 66.7
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 6.4e-34 147.9 128 56.2
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.4e-33 146.7 125 58.4
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 2.4e-33 146.0 134 52.2
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 2.7e-32 142.5 164 50.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.5e-32 142.1 102 64.7
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 3.5e-32 142.1 100 64.0
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.6e-32 141.7 120 55.8
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 3.0e-31 139.0 99 63.6
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 8.6e-31 137.5 120 55.0
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.1e-30 137.1 120 54.2
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 3.6e-29 132.1 115 60.0
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 6.2e-29 131.3 113 58.4
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 6.2e-29 131.3 155 50.3
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 5.2e-28 128.3 118 50.0
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 5.8e-27 124.8 96 63.5
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 9.8e-27 124.0 169 42.0
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 1.7e-26 123.2 117 58.1
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.7e-26 122.1 121 52.9
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.4e-25 120.2 118 51.7
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 5.4e-25 118.2 98 58.2
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 9.2e-25 117.5 102 56.9
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.6e-24 116.7 98 57.1
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 2.7e-24 115.9 123 46.3
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 2.7e-24 115.9 122 52.5
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 6.0e-24 114.8 119 46.2
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.7e-23 113.2 92 60.9
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 3.6e-21 105.5 98 55.1
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 8.1e-21 104.4 92 54.3
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 1.8e-20 103.2 102 48.0
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 3.1e-20 102.4 98 54.1
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.7e-18 95.5 88 54.5
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 4.9e-18 95.1 101 40.6
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.7e-16 89.4 99 43.4
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 7.8e-16 87.8 116 45.7
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.0e-15 87.4 92 48.9
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 1.7e-15 86.7 74 56.8
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 7.3e-14 81.3 118 33.9
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 6.2e-13 78.2 69 55.1
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 8.1e-13 77.8 64 56.2
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.4e-09 67.0 80 48.8


User provided reference genes

Program Settings