Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G18830 Arabidopsis thaliana HOM05D000845 ORTHO05D023345 1.6e-29 132.1 66 100.0
CARHR043480 Cardamine hirsuta HOM05D000845 ORTHO05D003813 2.3e-20 101.7 61 82.0
Carub.0001s4243 Capsella rubella HOM05D000845 ORTHO05D003813 2.9e-20 101.3 61 82.0
AL1G61660 Arabidopsis lyrata HOM05D000845 ORTHO05D003813 3.8e-20 100.9 61 80.3
Thhalv10011518m.g Eutrema salsugineum HOM05D000845 ORTHO05D003813 9.5e-19 96.3 63 76.2
Sp1g39820 Schrenkiella parvula HOM05D000845 ORTHO05D003813 9.5e-19 96.3 61 75.4
BcaC08g44068 Brassica carinata HOM05D000845 ORTHO05D003813 1.2e-16 89.4 61 72.1
BcaB02g10944 Brassica carinata HOM05D000845 ORTHO05D003813 2.0e-16 88.6 61 70.5
A05p18460 Brassica napus HOM05D000845 ORTHO05D003813 3.4e-16 87.8 61 68.9
BraA05t20738Z Brassica rapa HOM05D000845 ORTHO05D003813 3.4e-16 87.8 61 68.9
C06p14640 Brassica napus HOM05D000845 ORTHO05D003813 1.1e-14 82.8 61 67.2
BolC6t36646H Brassica oleracea HOM05D000845 ORTHO05D003813 1.1e-14 82.8 61 67.2
Aa31LG10G1900 Aethionema arabicum HOM05D000845 ORTHO05D003813 1.4e-14 82.4 63 68.3
AL3G27340 Arabidopsis lyrata HOM05D000845 ORTHO05D003813 4.1e-14 80.9 61 67.2
BcaB07g33343 Brassica carinata HOM05D000845 ORTHO05D003813 4.1e-14 80.9 61 63.9
AT3G15010 Arabidopsis thaliana HOM05D000845 ORTHO05D003813 1.2e-13 79.3 61 67.2
THA.LOC104804848 Tarenaya hassleriana HOM05D000845 ORTHO05D003813 5.9e-13 77.0 61 63.9
BcaB04g17098 Brassica carinata HOM05D000845 ORTHO05D003813 2.3e-12 75.1 61 63.9
A06p01100 Brassica napus HOM05D000845 ORTHO05D003813 5.0e-12 73.9 61 62.3
C06p09020 Brassica napus HOM05D000845 ORTHO05D003813 5.0e-12 73.9 61 62.3
BolC6t35980H Brassica oleracea HOM05D000845 ORTHO05D003813 5.0e-12 73.9 61 62.3
BraA06t23337Z Brassica rapa HOM05D000845 ORTHO05D003813 5.0e-12 73.9 61 62.3
Cpa.g.sc131.61 Carica papaya HOM05D000845 ORTHO05D003813 1.5e-11 72.4 61 60.7
CANSAT35G0425 Cannabis sativa HOM05D000845 ORTHO05D003813 1.9e-11 72.0 63 58.7
Sp3g13210 Schrenkiella parvula HOM05D000845 ORTHO05D003813 2.5e-11 71.6 61 59.0
Potri.001G377400 Populus trichocarpa HOM05D000845 ORTHO05D003813 9.5e-11 69.7 61 57.4
Sabra16G0248600 Salix brachista HOM05D000845 ORTHO05D003813 9.5e-11 69.7 61 59.0
AUR62027307 Chenopodium quinoa HOM05D000845 ORTHO05D003813 2.8e-10 68.2 66 53.0
Cc05_g11330 Coffea canephora HOM05D000845 ORTHO05D003813 2.8e-10 68.2 65 56.9
BcaC08g43514 Brassica carinata HOM05D000845 ORTHO05D003813 3.6e-10 67.8 61 57.4
arahy.Tifrunner.gnm1.ann1.R3FDKV Arachis hypogaea HOM05D000845 ORTHO05D003813 6.1e-10 67.0 62 61.3
AUR62007431 Chenopodium quinoa HOM05D000845 ORTHO05D003813 6.1e-10 67.0 66 51.5
Lalb_Chr19g0133881 Lupinus albus HOM05D000845 ORTHO05D003813 6.1e-10 67.0 61 59.0
Duzib170G0780 Durio zibethinus HOM05D000845 ORTHO05D003813 1.0e-09 66.2 62 56.5
Lj3g0007758 Lotus japonicus HOM05D000845 ORTHO05D003813 1.0e-09 66.2 61 57.4
BcaC08g43516 Brassica carinata HOM05D002049 ORTHO05D023345 1.8e-09 65.5 61 55.7
COL.COLO4_17604 Corchorus olitorius HOM05D000845 ORTHO05D003813 1.8e-09 65.5 61 57.4
Glyma.12G159600 Glycine max HOM05D000845 ORTHO05D003813 1.8e-09 65.5 61 55.7
MBI07_g21393_MAGBIO Magnolia biondii HOM05D000845 ORTHO05D003813 1.8e-09 65.5 57 64.9
Sed0024539 Sechium edule HOM05D000845 ORTHO05D003813 1.8e-09 65.5 61 57.4
Sc16g0007470 Simmondsia chinensis HOM05D000845 ORTHO05D003813 1.8e-09 65.5 61 52.5
MD11G1259900 Malus domestica HOM05D000845 ORTHO05D003813 2.3e-09 65.1 61 55.7
MD03G1240500 Malus domestica HOM05D000845 ORTHO05D003813 3.1e-09 64.7 61 55.7
Manes.16G038000 Manihot esculenta HOM05D000845 ORTHO05D003813 3.1e-09 64.7 61 52.5
MELO3C016101.2 Cucumis melo HOM05D000845 ORTHO05D003813 5.2e-09 63.9 61 54.1
CsaV3_4G008320 Cucumis sativus L. HOM05D000845 ORTHO05D003813 5.2e-09 63.9 61 54.1
Manes.17G054700 Manihot esculenta HOM05D000845 ORTHO05D003813 5.2e-09 63.9 61 52.5
Prupe.4G170100 Prunus persica HOM05D000845 ORTHO05D003813 5.2e-09 63.9 61 55.7
Psat4g135480 Pisum sativum HOM05D000845 ORTHO05D003813 6.8e-09 63.5 61 52.5
Thecc.07G105400 Theobroma cacao HOM05D000845 ORTHO05D003813 6.8e-09 63.5 61 55.7
TPR.G34594 Trifolium pratense HOM05D000845 ORTHO05D003813 6.8e-09 63.5 61 54.1
PSO541G4253 Papaver somniferum HOM05D000845 ORTHO05D003813 8.9e-09 63.2 58 58.6
Ca_23075_v3 Cicer arietinum L. HOM05D000845 ORTHO05D003813 1.2e-08 62.8 61 54.1
ClCG07G010010 Citrullus lanatus HOM05D000845 ORTHO05D003813 1.2e-08 62.8 61 50.8
Ciclev10008394m.g Citrus clementina HOM05D000845 ORTHO05D003813 1.2e-08 62.8 61 57.4
Lj2C297T16 Lonicera japonica HOM05D000845 ORTHO05D003813 1.2e-08 62.8 61 54.1
Gohir.A04G038900 Gossypium hirsutum HOM05D000845 ORTHO05D003813 1.5e-08 62.4 62 58.1
Oeu061345.1 Olea europaea HOM05D000845 ORTHO05D003813 1.5e-08 62.4 61 47.5
Gohir.D01G044200 Gossypium hirsutum HOM05D000845 ORTHO05D003813 2.0e-08 62.0 61 54.1
Gohir.D05G344200 Gossypium hirsutum HOM05D000845 ORTHO05D003813 2.0e-08 62.0 62 58.1
Gorai.002G063400 Gossypium raimondii HOM05D000845 ORTHO05D003813 2.0e-08 62.0 61 54.1
Gorai.009G372200 Gossypium raimondii HOM05D000845 ORTHO05D003813 2.0e-08 62.0 62 58.1
Medtr8g463890 Medicago truncatula HOM05D000845 ORTHO05D003813 2.0e-08 62.0 61 52.5
TWI38G0971 Tripterygium wilfordii HOM05D000845 ORTHO05D003813 2.0e-08 62.0 61 52.5
Actinidia35572 Actinidia chinensis HOM05D000845 ORTHO05D003813 2.6e-08 61.6 61 55.7
Phvul.011G159400 Phaseolus vulgaris HOM05D000845 ORTHO05D003813 2.6e-08 61.6 61 52.5
FAN21G3848 Fragaria x ananassa HOM05D000845 ORTHO05D003813 3.4e-08 61.2 61 55.7
FAN25G2485 Fragaria x ananassa HOM05D000845 ORTHO05D003813 3.4e-08 61.2 61 55.7
Gohir.A01G057800 Gossypium hirsutum HOM05D000845 ORTHO05D003813 3.4e-08 61.2 62 54.8
Peaxi162Scf01503g00022 Petunia axillaris HOM05D000845 ORTHO05D003813 3.4e-08 61.2 61 52.5
Hund14327 Selenicereus undatus HOM05D000845 ORTHO05D003813 3.4e-08 61.2 67 47.8
TAR624G0065 Trochodendron aralioides HOM05D000845 ORTHO05D003813 3.4e-08 61.2 61 57.4
Glyma.06G231000 Glycine max HOM05D000845 ORTHO05D003813 4.4e-08 60.8 61 52.5
Lj1A833G53 Lonicera japonica HOM05D000845 ORTHO05D003813 4.4e-08 60.8 61 52.5
Oeu051115.1 Olea europaea HOM05D000845 ORTHO05D003813 4.4e-08 60.8 61 47.5
FvH4_3g18630 Fragaria vesca HOM05D000845 ORTHO05D003813 5.8e-08 60.5 61 55.7
Sed0021023 Sechium edule HOM05D000845 ORTHO05D003813 5.8e-08 60.5 57 50.9
AUR62019527 Chenopodium quinoa HOM05D000845 ORTHO05D003813 7.5e-08 60.1 61 52.5
FAN16G1008 Fragaria x ananassa HOM05D000845 ORTHO05D003813 7.5e-08 60.1 61 54.1
PGSC0003DMG400015382 Solanum tuberosum HOM05D000845 ORTHO05D003813 7.5e-08 60.1 61 50.8
AUR62036111 Chenopodium quinoa HOM05D000845 ORTHO05D003813 9.8e-08 59.7 61 52.5
Solyc12g014210.3 Solanum lycopersicum HOM05D000845 ORTHO05D003813 9.8e-08 59.7 61 49.2
Sopen12g006000 Solanum pennellii HOM05D000845 ORTHO05D003813 9.8e-08 59.7 61 49.2
SGA_v2.0_scaffold130G34314 Striga asiatica HOM05D000845 ORTHO05D003813 9.8e-08 59.7 61 50.8
TAR626G0860 Trochodendron aralioides HOM05D000845 ORTHO05D003813 9.8e-08 59.7 61 52.5
VMungo1127G0421 Vigna mungo HOM05D000845 ORTHO05D003813 1.3e-07 59.3 61 54.1
Lalb_Chr03g0031081 Lupinus albus HOM05D000845 ORTHO05D003813 1.7e-07 58.9 61 52.5
Nitab4.5_0000035g0070 Nicotiana tabacum HOM05D000845 ORTHO05D003813 1.7e-07 58.9 61 50.8
Nitab4.5_0005440g0010 Nicotiana tabacum HOM05D000845 ORTHO05D003813 1.7e-07 58.9 61 50.8
Potri.011G065200 Populus trichocarpa HOM05D000845 ORTHO05D003813 1.7e-07 58.9 61 50.8
Hund14326 Selenicereus undatus HOM05D000845 ORTHO05D003813 1.7e-07 58.9 67 47.8
Eucgr.F03253 Eucalyptus grandis HOM05D000845 ORTHO05D003813 2.2e-07 58.5 60 45.0
Sabra04G0036100 Salix brachista HOM05D000845 ORTHO05D003813 2.2e-07 58.5 61 47.5
TWI39G0195 Tripterygium wilfordii HOM05D000845 ORTHO05D003813 2.2e-07 58.5 61 50.8
CSS0009805 Camellia sinensis var. sinensis HOM05D000845 ORTHO05D003813 2.9e-07 58.2 61 54.1
Actinidia12557 Actinidia chinensis HOM05D000845 ORTHO05D003813 3.7e-07 57.8 61 54.1
Actinidia16801 Actinidia chinensis HOM05D000845 ORTHO05D023345 3.7e-07 57.8 61 52.5
unitig_0.g2273 Utricularia gibba HOM05D000845 ORTHO05D003813 3.7e-07 57.8 61 52.5
CSS0049139 Camellia sinensis var. sinensis HOM05D000845 ORTHO05D003813 4.9e-07 57.4 61 55.7
Gohir.D05G343950 Gossypium hirsutum HOM05D000845 ORTHO05D023345 4.9e-07 57.4 61 50.8
RcHm_v2.0_Chr5g0031451 Rosa chinensis HOM05D000845 ORTHO05D003813 4.9e-07 57.4 61 54.1
Actinidia31609 Actinidia chinensis HOM05D000845 ORTHO05D003813 6.4e-07 57.0 61 55.7
CANSAT35G0291 Cannabis sativa HOM05D000845 ORTHO05D003813 8.3e-07 56.6 62 46.8
Potri.004G055400 Populus trichocarpa HOM05D000845 ORTHO05D003813 8.3e-07 56.6 61 47.5
Prupe.4G060300 Prunus persica HOM05D000845 ORTHO05D003813 8.3e-07 56.6 61 50.8
Oeu001089.1 Olea europaea HOM05D000845 ORTHO05D003813 1.4e-06 55.8 69 43.5
MSTRG.16145 Avicennia marina HOM05D000845 ORTHO05D003813 1.9e-06 55.5 69 46.4
Cfa019589 Carpinus fangiana HOM05D000845 ORTHO05D003813 1.9e-06 55.5 61 49.2
Eucgr.F01217 Eucalyptus grandis HOM05D000845 ORTHO05D003813 1.9e-06 55.5 65 43.1
MD10G1280800 Malus domestica HOM05D000845 ORTHO05D003813 1.9e-06 55.5 61 49.2
PGR083G0635 Punica granatum HOM05D000845 ORTHO05D003813 1.9e-06 55.5 61 44.3
unitig_746.g26740 Utricularia gibba HOM05D000845 ORTHO05D003813 1.9e-06 55.5 69 47.8
vmacro11914 Vaccinium macrocarpon HOM05D000845 ORTHO05D003813 1.9e-06 55.5 61 50.8
ATR0602G183 Amborella trichopoda HOM05D000845 ORTHO05D003813 2.4e-06 55.1 57 56.1
MSTRG.14221 Avicennia marina HOM05D000845 ORTHO05D003813 2.4e-06 55.1 61 49.2
Lsat_1_v5_gn_7_23020 Lactuca sativa HOM05D000845 ORTHO05D003813 2.4e-06 55.1 66 50.0
Lj8P151T14 Lonicera japonica HOM05D000845 ORTHO05D003813 2.4e-06 55.1 61 50.8
SGA_v2.0_scaffold1G00033 Striga asiatica HOM05D000845 ORTHO05D003813 2.4e-06 55.1 69 47.8
Duzib213G0296 Durio zibethinus HOM05D000845 ORTHO05D003813 3.2e-06 54.7 65 50.8
Nn1g09094 Nelumbo nucifera HOM05D000845 ORTHO05D003813 3.2e-06 54.7 57 56.1
vmacro15967 Vaccinium macrocarpon HOM05D000845 ORTHO05D003813 3.2e-06 54.7 60 53.3
FvH4_3g07890 Fragaria vesca HOM05D000845 ORTHO05D003813 4.1e-06 54.3 61 47.5
FAN16G3147 Fragaria x ananassa HOM05D000845 ORTHO05D003813 4.1e-06 54.3 61 47.5
FAN21G2031 Fragaria x ananassa HOM05D000845 ORTHO05D003813 4.1e-06 54.3 61 47.5
Lj4g0025569 Lotus japonicus HOM05D000845 ORTHO05D003813 4.1e-06 54.3 65 49.2
Mapoly0188s0017 Marchantia polymorpha HOM05D000845 ORTHO05D003813 4.1e-06 54.3 58 48.3
SalBow8G5399 Salvia bowleyana HOM05D000845 ORTHO05D003813 4.1e-06 54.3 69 47.8
CiPaw.11G162600 Carya illinoinensis HOM05D000845 ORTHO05D003813 5.4e-06 53.9 61 47.5
Migut.M01047 Erythranthe guttata HOM05D000845 ORTHO05D003813 5.4e-06 53.9 69 46.4
FAN11G0270 Fragaria x ananassa HOM05D000845 ORTHO05D003813 5.4e-06 53.9 61 47.5
Rhsim06G0205600 Rhododendron simsii HOM05D000845 ORTHO05D003813 5.4e-06 53.9 61 47.5
SGA_v2.0_scaffold16G07674 Striga asiatica HOM05D000845 ORTHO05D003813 5.4e-06 53.9 69 44.9
Atru.chr2.2219 Acer truncatum HOM05D000845 ORTHO05D003813 7.0e-06 53.5 61 49.2
arahy.Tifrunner.gnm1.ann1.GMX3PX Arachis hypogaea HOM05D000845 ORTHO05D003813 7.0e-06 53.5 61 45.9
arahy.Tifrunner.gnm1.ann1.IV0UFI Arachis hypogaea HOM05D000845 ORTHO05D003813 7.0e-06 53.5 60 46.7
Migut.H01979 Erythranthe guttata HOM05D000845 ORTHO05D003813 7.0e-06 53.5 61 47.5
Aqoxy1G03183 Aquilegia oxysepala HOM05D000845 ORTHO05D003813 9.2e-06 53.1 58 51.7
CSS0033380 Camellia sinensis var. sinensis HOM05D000845 ORTHO05D003813 9.2e-06 53.1 61 50.8
FAN25G2321 Fragaria x ananassa HOM05D000845 ORTHO05D003813 9.2e-06 53.1 61 47.5


User provided reference genes

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